RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 Q8NBF4 154 aa10.23□□□□□ -0.77
TPM3-220ENST00000509601 TPRXLQ17RH7 258 aa10.22□□□□□ -0.77
TPM3-220ENST00000509601 Q6ZRX8 168 aa10.22□□□□□ -0.77
TPM3-220ENST00000509601 LITAFQ99732 161 aa10.22□□□□□ -0.77
TPM3-220ENST00000509601 C4orf48Q5BLP8 95 aa10.21□□□□□ -0.77
TPM3-220ENST00000509601 S100A7L2Q5SY68 101 aa10.21□□□□□ -0.77
TPM3-220ENST00000509601 PET117Q6UWS5 81 aa10.21□□□□□ -0.77
TPM3-220ENST00000509601 TRAV23DV6A0A075B6W5 121 aa10.18□□□□□ -0.78
TPM3-220ENST00000509601 LINC00308Q8TCZ7 52 aa10.18□□□□□ -0.78
TPM3-220ENST00000509601 CDIP1Q9H305 208 aa10.18□□□□□ -0.78
TPM3-220ENST00000509601 ZNF73O43830 326 aaPredicted RBP10.17□□□□□ -0.78
TPM3-220ENST00000509601 C3orf79P0CE67 100 aa10.17□□□□□ -0.78
TPM3-220ENST00000509601 COA6Q5JTJ3 125 aaKnown RBP10.17□□□□□ -0.78
TPM3-220ENST00000509601 TIMM17BO60830 172 aa10.16□□□□□ -0.78
TPM3-220ENST00000509601 SPINK1P00995 79 aa10.16□□□□□ -0.78
TPM3-220ENST00000509601 SSBP3-AS1Q7Z2R9 100 aa10.16□□□□□ -0.78
TPM3-220ENST00000509601 TTTY13Q9BZ97 58 aa10.16□□□□□ -0.78
TPM3-220ENST00000509601 IGLV9-49A0A0B4J1Y8 123 aa10.14□□□□□ -0.79
TPM3-220ENST00000509601 MOBPQ13875 183 aa10.14□□□□□ -0.79
TPM3-220ENST00000509601 JOSD1Q15040 202 aaPredicted RBP10.14□□□□□ -0.79
TPM3-220ENST00000509601 FP248Q71RG6 208 aaPredicted RBP10.14□□□□□ -0.79
TPM3-220ENST00000509601 SPANXCQ9NY87 97 aa10.14□□□□□ -0.79
TPM3-220ENST00000509601 ZNF815PA8K554 130 aa10.13□□□□□ -0.79
TPM3-220ENST00000509601 ST20-AS1Q8NBB2 130 aa10.13□□□□□ -0.79
TPM3-220ENST00000509601 C5orf52A6NGY3 159 aa10.09□□□□□ -0.79
TPM3-220ENST00000509601 KRTDAPP60985 99 aa10.09□□□□□ -0.79
TPM3-220ENST00000509601 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
TPM3-220ENST00000509601 OR13C6PQ8NH95 151 aa10.09□□□□□ -0.79
TPM3-220ENST00000509601 HINT1P49773 126 aaPredicted RBP10.08□□□□□ -0.8
TPM3-220ENST00000509601 RPS29P62273 56 aaKnown RBP10.08□□□□□ -0.8
TPM3-220ENST00000509601 Q8N377 158 aa10.08□□□□□ -0.8
TPM3-220ENST00000509601 CBY1Q9Y3M2 126 aa10.08□□□□□ -0.8
TPM3-220ENST00000509601 A0A0U1RQV1 116 aa10.07□□□□□ -0.8
TPM3-220ENST00000509601 ANKRD39Q53RE8 183 aa10.07□□□□□ -0.8
TPM3-220ENST00000509601 SPANXDQ9BXN6 97 aa10.07□□□□□ -0.8
TPM3-220ENST00000509601 SPRR1BP22528 89 aa10.05□□□□□ -0.8
TPM3-220ENST00000509601 LINC00518Q8N0U6 118 aa10.05□□□□□ -0.8
TPM3-220ENST00000509601 DHRS4-AS1Q9P1J3 65 aa10.03□□□□□ -0.8
TPM3-220ENST00000509601 LCE2AQ5TA79 106 aaPredicted RBP10.02□□□□□ -0.81
TPM3-220ENST00000509601 C9orf153Q5TBE3 101 aa10.02□□□□□ -0.81
TPM3-220ENST00000509601 ATOH7Q8N100 152 aa10.02□□□□□ -0.81
TPM3-220ENST00000509601 SLC25A20O43772 301 aa10.01□□□□□ -0.81
TPM3-220ENST00000509601 ELOF1P60002 83 aaKnown RBP10.01□□□□□ -0.81
TPM3-220ENST00000509601 C6orf99Q4VX62 202 aa10.01□□□□□ -0.81
TPM3-220ENST00000509601 SCGB1D4Q6XE38 83 aa10.01□□□□□ -0.81
TPM3-220ENST00000509601 C20orf202A1L168 122 aa10□□□□□ -0.81
TPM3-220ENST00000509601 COX7BP24311 80 aa10□□□□□ -0.81
TPM3-220ENST00000509601 PCP2Q8IVA1 136 aa10□□□□□ -0.81
TPM3-220ENST00000509601 IFITM1P13164 125 aa9.98□□□□□ -0.81
TPM3-220ENST00000509601 MUSTN1Q8IVN3 82 aa9.98□□□□□ -0.81
TPM3-220ENST00000509601 ASB16-AS1Q495Z4 193 aa9.97□□□□□ -0.81
TPM3-220ENST00000509601 Q6ZVH6 145 aa9.97□□□□□ -0.81
TPM3-220ENST00000509601 TRBV7-6A0A0J9YX20 115 aa9.96□□□□□ -0.82
TPM3-220ENST00000509601 SLC25A34Q6PIV7 304 aa9.95□□□□□ -0.82
TPM3-220ENST00000509601 LAMTOR3Q9UHA4 124 aa9.95□□□□□ -0.82
TPM3-220ENST00000509601 TAL2Q16559 108 aa9.94□□□□□ -0.82
TPM3-220ENST00000509601 COPS9Q8WXC6 57 aa9.94□□□□□ -0.82
TPM3-220ENST00000509601 A6NDN8 102 aa9.93□□□□□ -0.82
TPM3-220ENST00000509601 AKR1D1P51857 326 aa9.93□□□□□ -0.82
TPM3-220ENST00000509601 DEFB105AQ8NG35 78 aa9.93□□□□□ -0.82
TPM3-220ENST00000509601 KRTAP4-1Q9BYQ7 146 aa9.93□□□□□ -0.82
TPM3-220ENST00000509601 LINC01547P58512 204 aaPredicted RBP9.92□□□□□ -0.82
TPM3-220ENST00000509601 HRCT1Q6UXD1 115 aa9.92□□□□□ -0.82
TPM3-220ENST00000509601 SMIM29Q86T20 159 aa9.92□□□□□ -0.82
TPM3-220ENST00000509601 HIST3H2BBQ8N257 126 aa9.92□□□□□ -0.82
TPM3-220ENST00000509601 TEX49A0A1B0GTD5 131 aa9.91□□□□□ -0.82
TPM3-220ENST00000509601 A0A1B0GWB2 263 aa9.91□□□□□ -0.82
TPM3-220ENST00000509601 SNRPEP62304 92 aaKnown RBP9.91□□□□□ -0.82
TPM3-220ENST00000509601 Q1RN00 199 aa9.9□□□□□ -0.82
TPM3-220ENST00000509601 XP32Q5T750 250 aa9.9□□□□□ -0.82
TPM3-220ENST00000509601 HIST1H2BLQ99880 126 aa9.9□□□□□ -0.82
TPM3-220ENST00000509601 SEC61BP60468 96 aaKnown RBP9.89□□□□□ -0.83
TPM3-220ENST00000509601 IGLV5-48A0A075B6I7 105 aa9.88□□□□□ -0.83
TPM3-220ENST00000509601 TRAV13-2A0A0B4J235 113 aa9.87□□□□□ -0.83
TPM3-220ENST00000509601 SMIM11BQ8TCY0 68 aa9.87□□□□□ -0.83
TPM3-220ENST00000509601 CD164Q04900 197 aa9.86□□□□□ -0.83
TPM3-220ENST00000509601 LIMD2Q9BT23 127 aa9.86□□□□□ -0.83
TPM3-220ENST00000509601 PRO1933Q9H354 126 aa9.86□□□□□ -0.83
TPM3-220ENST00000509601 A4D1N5 150 aa9.85□□□□□ -0.83
TPM3-220ENST00000509601 S100A2P29034 98 aa9.84□□□□□ -0.83
TPM3-220ENST00000509601 A0A0G2JQZ4 141 aa9.82□□□□□ -0.84
TPM3-220ENST00000509601 S100A1P23297 94 aa9.82□□□□□ -0.84
TPM3-220ENST00000509601 Q5XG85 94 aa9.81□□□□□ -0.84
TPM3-220ENST00000509601 H7C2G1 150 aa9.8□□□□□ -0.84
TPM3-220ENST00000509601 KRTAP9-2Q9BYQ4 174 aa9.8□□□□□ -0.84
TPM3-220ENST00000509601 HSBP1L1C9JCN9 74 aa9.79□□□□□ -0.84
TPM3-220ENST00000509601 NHP2Q9NX24 153 aaKnown RBP9.79□□□□□ -0.84
TPM3-220ENST00000509601 C9orf92A6NGG3 77 aa9.77□□□□□ -0.85
TPM3-220ENST00000509601 S100A6P06703 90 aa9.77□□□□□ -0.85
TPM3-220ENST00000509601 LINC00575Q6W349 94 aa9.77□□□□□ -0.85
TPM3-220ENST00000509601 C1orf195Q5TG92 126 aa9.76□□□□□ -0.85
TPM3-220ENST00000509601 VAMP3Q15836 100 aa9.75□□□□□ -0.85
TPM3-220ENST00000509601 SCGB1D1O95968 90 aa9.73□□□□□ -0.85
TPM3-220ENST00000509601 PCOTHQ58A44 107 aa9.72□□□□□ -0.85
TPM3-220ENST00000509601 hADV29S1A0JD25 119 aa9.71□□□□□ -0.86
TPM3-220ENST00000509601 COX8AP10176 69 aa9.7□□□□□ -0.86
TPM3-220ENST00000509601 LCE2CQ5TA81 110 aa9.7□□□□□ -0.86
TPM3-220ENST00000509601 Q6ZQY7 126 aa9.7□□□□□ -0.86
TPM3-220ENST00000509601 HIST1H4GQ99525 98 aa9.68□□□□□ -0.86
TPM3-220ENST00000509601 C12orf57Q99622 126 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms