RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 SCXQ7RTU7 201 aa4.66□□□□□ -1.66
TRIO-213ENST00000509354 LINC00337Q8N6G1 96 aa4.66□□□□□ -1.66
TRIO-213ENST00000509354 SND1-IT1Q9HBX3 110 aa4.66□□□□□ -1.66
TRIO-213ENST00000509354 PRO0461Q9UI25 63 aa4.66□□□□□ -1.66
TRIO-213ENST00000509354 TRBV20-1A0A075B6N2 111 aa4.65□□□□□ -1.67
TRIO-213ENST00000509354 TRAV13-2A0A0B4J235 113 aa4.65□□□□□ -1.67
TRIO-213ENST00000509354 TRBV10-2A0A0K0K1G8 114 aa4.65□□□□□ -1.67
TRIO-213ENST00000509354 GAGE10A6NGK3 116 aa4.65□□□□□ -1.67
TRIO-213ENST00000509354 M0QXV9 152 aa4.65□□□□□ -1.67
TRIO-213ENST00000509354 INAFM2P0DMQ5 153 aa4.65□□□□□ -1.67
TRIO-213ENST00000509354 RPL28P46779 137 aaKnown RBP4.65□□□□□ -1.67
TRIO-213ENST00000509354 VAMP3Q15836 100 aa4.65□□□□□ -1.67
TRIO-213ENST00000509354 C14orf177Q52M58 125 aa4.65□□□□□ -1.67
TRIO-213ENST00000509354 LYRM7Q5U5X0 104 aa4.65□□□□□ -1.67
TRIO-213ENST00000509354 Q6ZRU5 148 aa4.65□□□□□ -1.67
TRIO-213ENST00000509354 Q8NDZ9 215 aa4.65□□□□□ -1.67
TRIO-213ENST00000509354 SPCS1Q9Y6A9 102 aa4.65□□□□□ -1.67
TRIO-213ENST00000509354 A0A0U1RRA0 63 aa4.64□□□□□ -1.67
TRIO-213ENST00000509354 NDUFC2-KCTD14E9PQ53 114 aa4.64□□□□□ -1.67
TRIO-213ENST00000509354 PFN2P35080 140 aa4.64□□□□□ -1.67
TRIO-213ENST00000509354 CNBPP62633 177 aaKnown RBP4.64□□□□□ -1.67
TRIO-213ENST00000509354 C9orf116Q5BN46 136 aaPredicted RBP4.64□□□□□ -1.67
TRIO-213ENST00000509354 NAA38Q9BRA0 125 aaKnown RBP4.64□□□□□ -1.67
TRIO-213ENST00000509354 PANO1I0J062 215 aa4.63□□□□□ -1.67
TRIO-213ENST00000509354 NPC2P61916 151 aa4.63□□□□□ -1.67
TRIO-213ENST00000509354 SYCNQ0VAF6 134 aa4.63□□□□□ -1.67
TRIO-213ENST00000509354 CIRBP-AS1Q8TBR5 109 aa4.63□□□□□ -1.67
TRIO-213ENST00000509354 LINC00526Q96FQ7 95 aa4.63□□□□□ -1.67
TRIO-213ENST00000509354 CAMK2N2Q96S95 79 aa4.63□□□□□ -1.67
TRIO-213ENST00000509354 IGLV5-37A0A075B6J1 123 aa4.62□□□□□ -1.67
TRIO-213ENST00000509354 F8W1H4 67 aa4.62□□□□□ -1.67
TRIO-213ENST00000509354 LST1O00453 97 aa4.62□□□□□ -1.67
TRIO-213ENST00000509354 TCL1BO95988 128 aa4.62□□□□□ -1.67
TRIO-213ENST00000509354 IGLV6-57P01721 117 aa4.62□□□□□ -1.67
TRIO-213ENST00000509354 RPL13AP40429 203 aaKnown RBP4.62□□□□□ -1.67
TRIO-213ENST00000509354 HIGD2BQ4VC39 106 aa4.62□□□□□ -1.67
TRIO-213ENST00000509354 CHTF8P0CG12 524 aa4.61□□□□□ -1.67
TRIO-213ENST00000509354 VPREB1P12018 145 aa4.61□□□□□ -1.67
TRIO-213ENST00000509354 KRTAP10-4P60372 401 aaPredicted RBP4.61□□□□□ -1.67
TRIO-213ENST00000509354 Q6ZRP5 223 aa4.61□□□□□ -1.67
TRIO-213ENST00000509354 C9orf163Q8N9P6 203 aa4.61□□□□□ -1.67
TRIO-213ENST00000509354 H3BMG7 143 aa4.6□□□□□ -1.67
TRIO-213ENST00000509354 PRYO14603 147 aa4.6□□□□□ -1.67
TRIO-213ENST00000509354 TRACP01848 142 aa4.6□□□□□ -1.67
TRIO-213ENST00000509354 C9orf129Q5T035 196 aaKnown RBP4.6□□□□□ -1.67
TRIO-213ENST00000509354 SMIM11BQ8TCY0 68 aa4.6□□□□□ -1.67
TRIO-213ENST00000509354 CARD19Q96LW7 228 aa4.6□□□□□ -1.67
TRIO-213ENST00000509354 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
TRIO-213ENST00000509354 TMEM126AQ9H061 195 aa4.6□□□□□ -1.67
TRIO-213ENST00000509354 A0A1B0GX51 115 aa4.59□□□□□ -1.67
TRIO-213ENST00000509354 H0YGX0 51 aa4.59□□□□□ -1.67
TRIO-213ENST00000509354 COX6CP09669 75 aa4.59□□□□□ -1.67
TRIO-213ENST00000509354 ATXN8Q156A1 80 aa4.59□□□□□ -1.67
TRIO-213ENST00000509354 SDIM1Q6ZPB5 146 aa4.59□□□□□ -1.67
TRIO-213ENST00000509354 LINC00167Q96N53 147 aa4.59□□□□□ -1.67
TRIO-213ENST00000509354 TNXBP22105 4242 aa4.58□□□□□ -1.68
TRIO-213ENST00000509354 TRBV7-6A0A0J9YX20 115 aa4.58□□□□□ -1.68
TRIO-213ENST00000509354 KRTAP7-1Q8IUC3 87 aa4.58□□□□□ -1.68
TRIO-213ENST00000509354 M0R378 163 aa4.57□□□□□ -1.68
TRIO-213ENST00000509354 PSMB2P49721 201 aa4.57□□□□□ -1.68
TRIO-213ENST00000509354 PRR3P79522 188 aaKnown RBP4.57□□□□□ -1.68
TRIO-213ENST00000509354 FAM218AQ96MZ4 157 aa4.57□□□□□ -1.68
TRIO-213ENST00000509354 LOC107984640A0A0U1RRK4 108 aa4.56□□□□□ -1.68
TRIO-213ENST00000509354 H3BT86 120 aa4.56□□□□□ -1.68
TRIO-213ENST00000509354 H7C2G1 150 aa4.56□□□□□ -1.68
TRIO-213ENST00000509354 RPL37AP61513 92 aaKnown RBP4.56□□□□□ -1.68
TRIO-213ENST00000509354 Q1RN00 199 aa4.56□□□□□ -1.68
TRIO-213ENST00000509354 SPACA4Q8TDM5 124 aa4.56□□□□□ -1.68
TRIO-213ENST00000509354 XAGE1AQ9HD64 81 aa4.56□□□□□ -1.68
TRIO-213ENST00000509354 C22orf24Q9Y442 160 aa4.56□□□□□ -1.68
TRIO-213ENST00000509354 A0A087WYN8 130 aa4.55□□□□□ -1.68
TRIO-213ENST00000509354 A0A096LNI7 61 aa4.55□□□□□ -1.68
TRIO-213ENST00000509354 IGKV2-24A0A0C4DH68 120 aa4.55□□□□□ -1.68
TRIO-213ENST00000509354 KRTAP4-16G5E9R7 235 aaPredicted RBP4.55□□□□□ -1.68
TRIO-213ENST00000509354 SCGB1C2P0DMR2 95 aa4.55□□□□□ -1.68
TRIO-213ENST00000509354 SPRR1AP35321 89 aa4.55□□□□□ -1.68
TRIO-213ENST00000509354 CLEC2BQ92478 149 aa4.55□□□□□ -1.68
TRIO-213ENST00000509354 KCNQ1DNQ9H478 68 aa4.55□□□□□ -1.68
TRIO-213ENST00000509354 TRBV10-3A0A0K0K1G6 114 aa4.54□□□□□ -1.68
TRIO-213ENST00000509354 SLC25A20O43772 301 aa4.54□□□□□ -1.68
TRIO-213ENST00000509354 RPL18AQ02543 176 aaKnown RBP4.54□□□□□ -1.68
TRIO-213ENST00000509354 SERTAD4-AS1Q5TG53 156 aa4.54□□□□□ -1.68
TRIO-213ENST00000509354 TEN1Q86WV5 123 aa4.54□□□□□ -1.68
TRIO-213ENST00000509354 ANKRD29Q8N6D5 301 aa4.54□□□□□ -1.68
TRIO-213ENST00000509354 PKIGQ9Y2B9 76 aa4.54□□□□□ -1.68
TRIO-213ENST00000509354 CBY1Q9Y3M2 126 aa4.54□□□□□ -1.68
TRIO-213ENST00000509354 C9JAW5 83 aa4.53□□□□□ -1.68
TRIO-213ENST00000509354 NCR3O14931 201 aa4.53□□□□□ -1.68
TRIO-213ENST00000509354 ELOF1P60002 83 aaKnown RBP4.53□□□□□ -1.68
TRIO-213ENST00000509354 OCIAD2Q56VL3 154 aa4.53□□□□□ -1.68
TRIO-213ENST00000509354 LINC00575Q6W349 94 aa4.53□□□□□ -1.68
TRIO-213ENST00000509354 MPLKIPQ8TAP9 179 aa4.53□□□□□ -1.68
TRIO-213ENST00000509354 C7orf33Q8WU49 177 aa4.53□□□□□ -1.68
TRIO-213ENST00000509354 PLAC8Q9NZF1 115 aa4.53□□□□□ -1.68
TRIO-213ENST00000509354 HMCN2Q8NDA2 5059 aa4.52□□□□□ -1.69
TRIO-213ENST00000509354 IGLV1-50A0A075B6I6 118 aa4.52□□□□□ -1.69
TRIO-213ENST00000509354 TRAV23DV6A0A075B6W5 121 aa4.52□□□□□ -1.69
TRIO-213ENST00000509354 KRTAP29-1A8MX34 341 aaPredicted RBP4.52□□□□□ -1.69
TRIO-213ENST00000509354 GAGE2EQ4V326 116 aa4.52□□□□□ -1.69
TRIO-213ENST00000509354 C6orf99Q4VX62 202 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms