RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 SPAG11BQ08648 103 aa6.63□□□□□ -1.35
PDGFRA-207ENST00000509092 CDC42SE1Q9NRR8 79 aa6.63□□□□□ -1.35
PDGFRA-207ENST00000509092 CELSR1Q9NYQ6 3014 aa6.63□□□□□ -1.35
PDGFRA-207ENST00000509092 NOTCH2Q04721 2471 aa6.63□□□□□ -1.35
PDGFRA-207ENST00000509092 LOC101927531A0A1B0GV80 90 aa6.62□□□□□ -1.35
PDGFRA-207ENST00000509092 SPANXA2-OT1Q8N9U9 137 aa6.62□□□□□ -1.35
PDGFRA-207ENST00000509092 IGLV10-54A0A075B6I4 117 aa6.61□□□□□ -1.35
PDGFRA-207ENST00000509092 FLNBO75369 2602 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-207ENST00000509092 PDZD2O15018 2839 aa6.61□□□□□ -1.35
PDGFRA-207ENST00000509092 IGLV5-48A0A075B6I7 105 aa6.61□□□□□ -1.35
PDGFRA-207ENST00000509092 CYSRT1A8MQ03 144 aa6.61□□□□□ -1.35
PDGFRA-207ENST00000509092 KPRPQ5T749 579 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-207ENST00000509092 ZANQ9Y493 2812 aa6.6□□□□□ -1.35
PDGFRA-207ENST00000509092 GVQW2A0A096LPI5 108 aaPredicted RBP6.6□□□□□ -1.35
PDGFRA-207ENST00000509092 DSCR10P59022 87 aa6.6□□□□□ -1.35
PDGFRA-207ENST00000509092 DEFB112Q30KQ8 113 aa6.6□□□□□ -1.35
PDGFRA-207ENST00000509092 KCNQ1DNQ9H478 68 aa6.6□□□□□ -1.35
PDGFRA-207ENST00000509092 NOTCH3Q9UM47 2321 aa6.6□□□□□ -1.35
PDGFRA-207ENST00000509092 GYPEP15421 78 aa6.6□□□□□ -1.35
PDGFRA-207ENST00000509092 MP68P56378 58 aa6.6□□□□□ -1.35
PDGFRA-207ENST00000509092 ZNF702PQ9H963 129 aa6.6□□□□□ -1.35
PDGFRA-207ENST00000509092 MSMBP08118 114 aa6.59□□□□□ -1.35
PDGFRA-207ENST00000509092 GIG44P09565 113 aaPredicted RBP6.59□□□□□ -1.35
PDGFRA-207ENST00000509092 REG3AQ06141 175 aa6.59□□□□□ -1.35
PDGFRA-207ENST00000509092 K7EQZ3 153 aa6.59□□□□□ -1.35
PDGFRA-207ENST00000509092 ITPR3Q14573 2671 aa6.58□□□□□ -1.36
PDGFRA-207ENST00000509092 VPREB1P12018 145 aa6.58□□□□□ -1.36
PDGFRA-207ENST00000509092 DEFB113Q30KQ7 82 aa6.58□□□□□ -1.36
PDGFRA-207ENST00000509092 CSNK1G2-AS1Q8NCQ2 148 aa6.58□□□□□ -1.36
PDGFRA-207ENST00000509092 XAGE1AQ9HD64 81 aa6.58□□□□□ -1.36
PDGFRA-207ENST00000509092 BAHCC1Q9P281 2608 aa6.58□□□□□ -1.36
PDGFRA-207ENST00000509092 A0A1W2PNM2 257 aa6.58□□□□□ -1.36
PDGFRA-207ENST00000509092 ANGP03950 147 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-207ENST00000509092 DSCR9P59020 149 aa6.58□□□□□ -1.36
PDGFRA-207ENST00000509092 C4orf3Q8WVX3 66 aa6.58□□□□□ -1.36
PDGFRA-207ENST00000509092 MYO9AB2RTY4 2548 aa6.58□□□□□ -1.36
PDGFRA-207ENST00000509092 MOBPQ13875 183 aa6.57□□□□□ -1.36
PDGFRA-207ENST00000509092 ZNF469Q96JG9 3925 aaPredicted RBP6.56□□□□□ -1.36
PDGFRA-207ENST00000509092 FLNAP21333 2647 aaKnown RBP6.56□□□□□ -1.36
PDGFRA-207ENST00000509092 TLN2Q9Y4G6 2542 aa6.56□□□□□ -1.36
PDGFRA-207ENST00000509092 Q8N377 158 aa6.56□□□□□ -1.36
PDGFRA-207ENST00000509092 TEX15Q9BXT5 2789 aa6.56□□□□□ -1.36
PDGFRA-207ENST00000509092 CSPG4Q6UVK1 2322 aa6.56□□□□□ -1.36
PDGFRA-207ENST00000509092 C6orf48Q9UBA6 75 aa6.56□□□□□ -1.36
PDGFRA-207ENST00000509092 Q8NBF4 154 aa6.55□□□□□ -1.36
PDGFRA-207ENST00000509092 H3BPC8 53 aa6.55□□□□□ -1.36
PDGFRA-207ENST00000509092 H3BS24 57 aa6.55□□□□□ -1.36
PDGFRA-207ENST00000509092 SPRR4Q96PI1 79 aa6.55□□□□□ -1.36
PDGFRA-207ENST00000509092 ACANP16112 2415 aa6.54□□□□□ -1.36
PDGFRA-207ENST00000509092 DEFB105AQ8NG35 78 aa6.54□□□□□ -1.36
PDGFRA-207ENST00000509092 WFDC10AQ9H1F0 79 aa6.54□□□□□ -1.36
PDGFRA-207ENST00000509092 KRTAP1-3Q8IUG1 177 aa6.54□□□□□ -1.36
PDGFRA-207ENST00000509092 NKAPP1Q8N9T2 125 aa6.54□□□□□ -1.36
PDGFRA-207ENST00000509092 A0A096LPF7 62 aa6.53□□□□□ -1.36
PDGFRA-207ENST00000509092 DEFB130BP0DP73 79 aa6.53□□□□□ -1.36
PDGFRA-207ENST00000509092 DEFB130AP0DP74 79 aa6.53□□□□□ -1.36
PDGFRA-207ENST00000509092 C1orf137Q5JT78 98 aa6.53□□□□□ -1.36
PDGFRA-207ENST00000509092 AKAP9Q99996 3911 aa6.53□□□□□ -1.36
PDGFRA-207ENST00000509092 SETXQ7Z333 2677 aaKnown RBP6.52□□□□□ -1.37
PDGFRA-207ENST00000509092 TNP2Q05952 138 aa6.52□□□□□ -1.37
PDGFRA-207ENST00000509092 MAPK1IP1LQ8NDC0 245 aa6.52□□□□□ -1.37
PDGFRA-207ENST00000509092 B4DSR2 109 aa6.51□□□□□ -1.37
PDGFRA-207ENST00000509092 CMC4P56277 68 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-207ENST00000509092 COA5Q86WW8 74 aa6.51□□□□□ -1.37
PDGFRA-207ENST00000509092 PRO0255Q9UI72 69 aa6.51□□□□□ -1.37
PDGFRA-207ENST00000509092 H0Y9P7 68 aa6.5□□□□□ -1.37
PDGFRA-207ENST00000509092 OTOGQ6ZRI0 2925 aa6.5□□□□□ -1.37
PDGFRA-207ENST00000509092 SONP18583 2426 aaKnown RBP6.5□□□□□ -1.37
PDGFRA-207ENST00000509092 C9orf163Q8N9P6 203 aa6.5□□□□□ -1.37
PDGFRA-207ENST00000509092 PLAC8Q9NZF1 115 aa6.5□□□□□ -1.37
PDGFRA-207ENST00000509092 LINC01558Q9Y6Z2 57 aa6.5□□□□□ -1.37
PDGFRA-207ENST00000509092 IGKV2D-24A0A075B6R9 120 aa6.49□□□□□ -1.37
PDGFRA-207ENST00000509092 WFDC13Q8IUB5 93 aa6.49□□□□□ -1.37
PDGFRA-207ENST00000509092 MXRA5Q9NR99 2828 aa6.48□□□□□ -1.37
PDGFRA-207ENST00000509092 Q6YL49 198 aa6.48□□□□□ -1.37
PDGFRA-207ENST00000509092 EGFEM1PQ0D2K5 195 aa6.47□□□□□ -1.37
PDGFRA-207ENST00000509092 DEFB116Q30KQ4 102 aa6.47□□□□□ -1.37
PDGFRA-207ENST00000509092 DHRS4-AS1Q9P1J3 65 aa6.47□□□□□ -1.37
PDGFRA-207ENST00000509092 LINC00313P59037 77 aa6.46□□□□□ -1.38
PDGFRA-207ENST00000509092 MTORP42345 2549 aa6.46□□□□□ -1.38
PDGFRA-207ENST00000509092 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-207ENST00000509092 FSHBP01225 129 aa6.45□□□□□ -1.38
PDGFRA-207ENST00000509092 WFDC10BQ8IUB3 73 aa6.45□□□□□ -1.38
PDGFRA-207ENST00000509092 C7orf33Q8WU49 177 aa6.45□□□□□ -1.38
PDGFRA-207ENST00000509092 PRR34Q9NV39 138 aa6.45□□□□□ -1.38
PDGFRA-207ENST00000509092 IGLV7-46A0A075B6I9 117 aa6.45□□□□□ -1.38
PDGFRA-207ENST00000509092 CAMK2N2Q96S95 79 aa6.45□□□□□ -1.38
PDGFRA-207ENST00000509092 C19orf73Q9NVV2 129 aa6.45□□□□□ -1.38
PDGFRA-207ENST00000509092 HIVEP1P15822 2718 aa6.45□□□□□ -1.38
PDGFRA-207ENST00000509092 DNAJC9-AS1A6NH13 148 aa6.44□□□□□ -1.38
PDGFRA-207ENST00000509092 CASC2Q6XLA1 102 aa6.44□□□□□ -1.38
PDGFRA-207ENST00000509092 SPINK7P58062 85 aa6.44□□□□□ -1.38
PDGFRA-207ENST00000509092 LINC01554Q52M75 96 aa6.44□□□□□ -1.38
PDGFRA-207ENST00000509092 CNBPP62633 177 aaKnown RBP6.42□□□□□ -1.38
PDGFRA-207ENST00000509092 HIVEP2P31629 2446 aa6.42□□□□□ -1.38
PDGFRA-207ENST00000509092 SPAG11AQ6PDA7 123 aa6.42□□□□□ -1.38
PDGFRA-207ENST00000509092 Q6ZRX8 168 aa6.42□□□□□ -1.38
PDGFRA-207ENST00000509092 KRTAP1-1Q07627 177 aa6.41□□□□□ -1.38
PDGFRA-207ENST00000509092 PRAC1Q96KF2 57 aa6.41□□□□□ -1.38
PDGFRA-207ENST00000509092 F8P00451 2351 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms