RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 UQCRQO14949 82 aa7.58□□□□□ -1.2
PRPF40B-203ENST00000508736 Q6ZRP5 223 aa7.58□□□□□ -1.2
PRPF40B-203ENST00000508736 NKAPP1Q8N9T2 125 aa7.58□□□□□ -1.2
PRPF40B-203ENST00000508736 C3orf22Q8N5N4 141 aa7.57□□□□□ -1.2
PRPF40B-203ENST00000508736 APLNQ9ULZ1 77 aa7.57□□□□□ -1.2
PRPF40B-203ENST00000508736 SS18L2Q9UHA2 77 aa7.55□□□□□ -1.2
PRPF40B-203ENST00000508736 TLX1NBP0CAT3 122 aa7.55□□□□□ -1.2
PRPF40B-203ENST00000508736 LINC00528Q8N1L1 170 aa7.55□□□□□ -1.2
PRPF40B-203ENST00000508736 COX7CP15954 63 aa7.54□□□□□ -1.2
PRPF40B-203ENST00000508736 C9orf153Q5TBE3 101 aa7.54□□□□□ -1.2
PRPF40B-203ENST00000508736 WWC2-AS2Q96NR7 200 aa7.54□□□□□ -1.2
PRPF40B-203ENST00000508736 NUPR2A6NF83 97 aa7.53□□□□□ -1.2
PRPF40B-203ENST00000508736 PLA2G2DQ9UNK4 145 aa7.53□□□□□ -1.2
PRPF40B-203ENST00000508736 USP17L23D6RBM5 183 aa7.52□□□□□ -1.21
PRPF40B-203ENST00000508736 KCNQ1DNQ9H478 68 aa7.52□□□□□ -1.21
PRPF40B-203ENST00000508736 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
PRPF40B-203ENST00000508736 A0A087WVE0 104 aa7.51□□□□□ -1.21
PRPF40B-203ENST00000508736 TRBV7-4A0A0J9YYF1 115 aa7.51□□□□□ -1.21
PRPF40B-203ENST00000508736 DNAH7Q8WXX0 4024 aa7.51□□□□□ -1.21
PRPF40B-203ENST00000508736 UBE2DNLQ8IWF7 75 aa7.51□□□□□ -1.21
PRPF40B-203ENST00000508736 SERP2Q8N6R1 65 aa7.5□□□□□ -1.21
PRPF40B-203ENST00000508736 C7orf33Q8WU49 177 aa7.5□□□□□ -1.21
PRPF40B-203ENST00000508736 IGLV5-37A0A075B6J1 123 aa7.49□□□□□ -1.21
PRPF40B-203ENST00000508736 SERTAD4-AS1Q5TG53 156 aa7.49□□□□□ -1.21
PRPF40B-203ENST00000508736 PRYO14603 147 aa7.49□□□□□ -1.21
PRPF40B-203ENST00000508736 CASC10Q5T4H9 136 aa7.49□□□□□ -1.21
PRPF40B-203ENST00000508736 Q6ZVQ6 151 aa7.49□□□□□ -1.21
PRPF40B-203ENST00000508736 LYSTQ99698 3801 aa7.49□□□□□ -1.21
PRPF40B-203ENST00000508736 CRYGAP11844 174 aa7.48□□□□□ -1.21
PRPF40B-203ENST00000508736 KRTAP1-5Q9BYS1 174 aa7.48□□□□□ -1.21
PRPF40B-203ENST00000508736 DHRS4-AS1Q9P1J3 65 aa7.48□□□□□ -1.21
PRPF40B-203ENST00000508736 CXCL6P80162 114 aa7.47□□□□□ -1.21
PRPF40B-203ENST00000508736 LOC107984640A0A0U1RRK4 108 aa7.47□□□□□ -1.21
PRPF40B-203ENST00000508736 LINC01547P58512 204 aaPredicted RBP7.47□□□□□ -1.21
PRPF40B-203ENST00000508736 HAMPP81172 84 aa7.47□□□□□ -1.21
PRPF40B-203ENST00000508736 PLECQ15149 4684 aaKnown RBP7.46□□□□□ -1.22
PRPF40B-203ENST00000508736 FAM19A1Q7Z5A9 133 aa7.46□□□□□ -1.22
PRPF40B-203ENST00000508736 TENM2Q9NT68 2774 aa7.46□□□□□ -1.22
PRPF40B-203ENST00000508736 C3orf84H3BNL1 204 aa7.45□□□□□ -1.22
PRPF40B-203ENST00000508736 M0R2N4 97 aa7.45□□□□□ -1.22
PRPF40B-203ENST00000508736 ETDCA0A1B0GVM5 59 aa7.45□□□□□ -1.22
PRPF40B-203ENST00000508736 Q6ZRX8 168 aa7.45□□□□□ -1.22
PRPF40B-203ENST00000508736 IGLV1-50A0A075B6I6 118 aa7.44□□□□□ -1.22
PRPF40B-203ENST00000508736 BCE1O60756 84 aa7.44□□□□□ -1.22
PRPF40B-203ENST00000508736 CNBPP62633 177 aaKnown RBP7.43□□□□□ -1.22
PRPF40B-203ENST00000508736 STARD9Q9P2P6 4700 aa7.43□□□□□ -1.22
PRPF40B-203ENST00000508736 NBDYA0A0U1RRE5 68 aa7.43□□□□□ -1.22
PRPF40B-203ENST00000508736 SPRR1AP35321 89 aa7.43□□□□□ -1.22
PRPF40B-203ENST00000508736 C14orf177Q52M58 125 aa7.43□□□□□ -1.22
PRPF40B-203ENST00000508736 MRPL55Q7Z7F7 128 aaKnown RBP7.43□□□□□ -1.22
PRPF40B-203ENST00000508736 FAM168BA1KXE4 195 aa7.42□□□□□ -1.22
PRPF40B-203ENST00000508736 RPL37AP8A6NKH3 93 aa7.42□□□□□ -1.22
PRPF40B-203ENST00000508736 PSCAO43653 123 aa7.42□□□□□ -1.22
PRPF40B-203ENST00000508736 SMIM20Q8N5G0 67 aa7.42□□□□□ -1.22
PRPF40B-203ENST00000508736 KRTAP4-16G5E9R7 235 aaPredicted RBP7.41□□□□□ -1.22
PRPF40B-203ENST00000508736 FAM19A5Q7Z5A7 132 aaPredicted RBP7.41□□□□□ -1.22
PRPF40B-203ENST00000508736 DEFB105AQ8NG35 78 aa7.41□□□□□ -1.22
PRPF40B-203ENST00000508736 Q8N377 158 aa7.4□□□□□ -1.23
PRPF40B-203ENST00000508736 VPS13DQ5THJ4 4388 aa7.4□□□□□ -1.23
PRPF40B-203ENST00000508736 IGLV5-48A0A075B6I7 105 aa7.39□□□□□ -1.23
PRPF40B-203ENST00000508736 A0A1B0GW54 56 aa7.39□□□□□ -1.23
PRPF40B-203ENST00000508736 DNAH10Q8IVF4 4471 aa7.39□□□□□ -1.23
PRPF40B-203ENST00000508736 Q9BRP9 147 aa7.38□□□□□ -1.23
PRPF40B-203ENST00000508736 FUSP35637 526 aaKnown RBP eCLIP7.38□□□□□ -1.23
PRPF40B-203ENST00000508736 TRAV7A0A075B6U4 112 aa7.37□□□□□ -1.23
PRPF40B-203ENST00000508736 TMEM258P61165 79 aa7.37□□□□□ -1.23
PRPF40B-203ENST00000508736 NREPQ16612 68 aa7.37□□□□□ -1.23
PRPF40B-203ENST00000508736 REG3GQ6UW15 175 aa7.37□□□□□ -1.23
PRPF40B-203ENST00000508736 KRTAP7-1Q8IUC3 87 aa7.37□□□□□ -1.23
PRPF40B-203ENST00000508736 LRCOL1A6NCL2 159 aa7.36□□□□□ -1.23
PRPF40B-203ENST00000508736 C16orf90A8MZG2 172 aa7.36□□□□□ -1.23
PRPF40B-203ENST00000508736 UBE2BP63146 152 aa7.36□□□□□ -1.23
PRPF40B-203ENST00000508736 Q6ZRN7 208 aaPredicted RBP7.36□□□□□ -1.23
PRPF40B-203ENST00000508736 PKIGQ9Y2B9 76 aa7.36□□□□□ -1.23
PRPF40B-203ENST00000508736 LY6G6CO95867 125 aa7.35□□□□□ -1.23
PRPF40B-203ENST00000508736 SCXQ7RTU7 201 aa7.35□□□□□ -1.23
PRPF40B-203ENST00000508736 A0A096LNI7 61 aa7.33□□□□□ -1.24
PRPF40B-203ENST00000508736 TNP2Q05952 138 aa7.33□□□□□ -1.24
PRPF40B-203ENST00000508736 C1orf137Q5JT78 98 aa7.33□□□□□ -1.24
PRPF40B-203ENST00000508736 BPY2O14599 106 aa7.32□□□□□ -1.24
PRPF40B-203ENST00000508736 C9orf163Q8N9P6 203 aa7.32□□□□□ -1.24
PRPF40B-203ENST00000508736 ST20-AS1Q8NBB2 130 aa7.32□□□□□ -1.24
PRPF40B-203ENST00000508736 F8WEM9 126 aa7.32□□□□□ -1.24
PRPF40B-203ENST00000508736 J3KT08 172 aa7.32□□□□□ -1.24
PRPF40B-203ENST00000508736 LINC00476Q8WZB0 136 aa7.32□□□□□ -1.24
PRPF40B-203ENST00000508736 CYSTM1Q9H1C7 97 aa7.32□□□□□ -1.24
PRPF40B-203ENST00000508736 IGKV2-24A0A0C4DH68 120 aa7.31□□□□□ -1.24
PRPF40B-203ENST00000508736 C20orf197Q8N268 126 aa7.31□□□□□ -1.24
PRPF40B-203ENST00000508736 Q8NBF4 154 aa7.31□□□□□ -1.24
PRPF40B-203ENST00000508736 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.3□□□□□ -1.24
PRPF40B-203ENST00000508736 Q6ZR54 194 aa7.3□□□□□ -1.24
PRPF40B-203ENST00000508736 ERC2-IT1O76042 136 aa7.3□□□□□ -1.24
PRPF40B-203ENST00000508736 A0A1W2PNM2 257 aa7.29□□□□□ -1.24
PRPF40B-203ENST00000508736 IGKV4-1P06312 121 aa7.29□□□□□ -1.24
PRPF40B-203ENST00000508736 KMT2AQ03164 3969 aa7.28□□□□□ -1.24
PRPF40B-203ENST00000508736 RPS28P62857 69 aaKnown RBP7.28□□□□□ -1.24
PRPF40B-203ENST00000508736 SPRR4Q96PI1 79 aa7.28□□□□□ -1.24
PRPF40B-203ENST00000508736 LINC00474Q9P2X8 69 aa7.28□□□□□ -1.24
PRPF40B-203ENST00000508736 A0A1W2PNN7 141 aa7.27□□□□□ -1.25
PRPF40B-203ENST00000508736 A0A087WTM6 91 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms