RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 POLR1AO95602 1720 aaPredicted RBP1.54□□□□□ -2.16
GYPA-205ENST00000508337 AGLP35573 1532 aa1.54□□□□□ -2.16
GYPA-205ENST00000508337 ADCY10Q96PN6 1610 aa1.54□□□□□ -2.16
GYPA-205ENST00000508337 CROCC2H7BZ55 1655 aa1.53□□□□□ -2.16
GYPA-205ENST00000508337 URB1O60287 2271 aaKnown RBP1.53□□□□□ -2.16
GYPA-205ENST00000508337 LINC00158P58513 81 aa1.53□□□□□ -2.16
GYPA-205ENST00000508337 SPINK9Q5DT21 86 aa1.53□□□□□ -2.16
GYPA-205ENST00000508337 PRO3102Q9H379 93 aa1.53□□□□□ -2.16
GYPA-205ENST00000508337 PRO0255Q9UI72 69 aa1.53□□□□□ -2.16
GYPA-205ENST00000508337 LRRC37AA6NMS7 1700 aa1.52□□□□□ -2.17
GYPA-205ENST00000508337 COX6A2Q02221 97 aa1.52□□□□□ -2.17
GYPA-205ENST00000508337 DEFB123Q8N688 67 aa1.52□□□□□ -2.17
GYPA-205ENST00000508337 LOC730098B7Z3J9 87 aa1.51□□□□□ -2.17
GYPA-205ENST00000508337 PRB3Q04118 309 aaPredicted RBP1.51□□□□□ -2.17
GYPA-205ENST00000508337 CNFNQ9BYD5 112 aa1.51□□□□□ -2.17
GYPA-205ENST00000508337 C10orf95Q9H7T3 257 aa1.51□□□□□ -2.17
GYPA-205ENST00000508337 AHCTF1Q8WYP5 2266 aa1.51□□□□□ -2.17
GYPA-205ENST00000508337 NWD1Q149M9 1564 aa1.51□□□□□ -2.17
GYPA-205ENST00000508337 Q8IZM0 81 aa1.5□□□□□ -2.17
GYPA-205ENST00000508337 APLNQ9ULZ1 77 aa1.5□□□□□ -2.17
GYPA-205ENST00000508337 ABCC8Q09428 1581 aa1.5□□□□□ -2.17
GYPA-205ENST00000508337 TENM1Q9UKZ4 2725 aa1.5□□□□□ -2.17
GYPA-205ENST00000508337 JMJD1CQ15652 2540 aa1.49□□□□□ -2.17
GYPA-205ENST00000508337 LINC01546A6NGU7 62 aa1.49□□□□□ -2.17
GYPA-205ENST00000508337 CCL22O00626 93 aa1.49□□□□□ -2.17
GYPA-205ENST00000508337 CACNA1EQ15878 2313 aa1.48□□□□□ -2.17
GYPA-205ENST00000508337 LELP1Q5T871 98 aa1.48□□□□□ -2.17
GYPA-205ENST00000508337 LINC00308Q8TCZ7 52 aa1.48□□□□□ -2.17
GYPA-205ENST00000508337 KIAA0586Q9BVV6 1533 aa1.48□□□□□ -2.17
GYPA-205ENST00000508337 LY75O60449 1722 aa1.47□□□□□ -2.17
GYPA-205ENST00000508337 TJP1Q07157 1748 aa1.47□□□□□ -2.17
GYPA-205ENST00000508337 COX6B2Q6YFQ2 88 aa1.47□□□□□ -2.17
GYPA-205ENST00000508337 CNTRLQ7Z7A1 2325 aa1.47□□□□□ -2.17
GYPA-205ENST00000508337 RP1L1Q8IWN7 2480 aaPredicted RBP1.46□□□□□ -2.18
GYPA-205ENST00000508337 IQGAP2Q13576 1575 aa1.46□□□□□ -2.18
GYPA-205ENST00000508337 SPRR1AP35321 89 aa1.45□□□□□ -2.18
GYPA-205ENST00000508337 TFF3Q07654 80 aa1.45□□□□□ -2.18
GYPA-205ENST00000508337 TMEM167BQ9NRX6 74 aa1.45□□□□□ -2.18
GYPA-205ENST00000508337 QSER1Q2KHR3 1735 aa1.45□□□□□ -2.18
GYPA-205ENST00000508337 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.45□□□□□ -2.18
GYPA-205ENST00000508337 HELZ2Q9BYK8 2649 aaKnown RBP1.44□□□□□ -2.18
GYPA-205ENST00000508337 H1FX-AS1Q4G0G2 97 aa1.44□□□□□ -2.18
GYPA-205ENST00000508337 MINOS1Q5TGZ0 78 aa1.44□□□□□ -2.18
GYPA-205ENST00000508337 C3P01024 1663 aa1.44□□□□□ -2.18
GYPA-205ENST00000508337 FAM208BQ5VWN6 2430 aa1.44□□□□□ -2.18
GYPA-205ENST00000508337 NAV3Q8IVL0 2385 aa1.43□□□□□ -2.18
GYPA-205ENST00000508337 A0A0D9SG42 100 aa1.43□□□□□ -2.18
GYPA-205ENST00000508337 ANKRD36CQ5JPF3 1778 aa1.43□□□□□ -2.18
GYPA-205ENST00000508337 H0YAA0 97 aa1.42□□□□□ -2.18
GYPA-205ENST00000508337 WFDC13Q8IUB5 93 aa1.42□□□□□ -2.18
GYPA-205ENST00000508337 SPRR1BP22528 89 aa1.41□□□□□ -2.18
GYPA-205ENST00000508337 DEFB105AQ8NG35 78 aa1.41□□□□□ -2.18
GYPA-205ENST00000508337 DEPDC5O75140 1603 aa1.4□□□□□ -2.18
GYPA-205ENST00000508337 NRXN3Q9Y4C0 1643 aa1.4□□□□□ -2.18
GYPA-205ENST00000508337 LYNX1G3V0Z9 82 aa1.4□□□□□ -2.19
GYPA-205ENST00000508337 SNRPGP62308 76 aaKnown RBP1.4□□□□□ -2.19
GYPA-205ENST00000508337 KLK9Q2XQG4 91 aa1.4□□□□□ -2.19
GYPA-205ENST00000508337 C6orf48Q9UBA6 75 aa1.4□□□□□ -2.19
GYPA-205ENST00000508337 DDX60LQ5H9U9 1706 aaKnown RBP1.39□□□□□ -2.19
GYPA-205ENST00000508337 SMIM2Q9BVW6 85 aa1.38□□□□□ -2.19
GYPA-205ENST00000508337 COL6A6A6NMZ7 2263 aa1.38□□□□□ -2.19
GYPA-205ENST00000508337 DOPEY2Q9Y3R5 2298 aa1.38□□□□□ -2.19
GYPA-205ENST00000508337 TNRC6CQ9HCJ0 1690 aaKnown RBP1.38□□□□□ -2.19
GYPA-205ENST00000508337 FAM208AQ9UK61 1670 aaKnown RBP1.38□□□□□ -2.19
GYPA-205ENST00000508337 TRPM2O94759 1503 aa1.37□□□□□ -2.19
GYPA-205ENST00000508337 DEFB130BP0DP73 79 aa1.37□□□□□ -2.19
GYPA-205ENST00000508337 DEFB130AP0DP74 79 aa1.37□□□□□ -2.19
GYPA-205ENST00000508337 IAPPP10997 89 aa1.37□□□□□ -2.19
GYPA-205ENST00000508337 Q5VSD8 79 aa1.37□□□□□ -2.19
GYPA-205ENST00000508337 CNOT1A5YKK6 2376 aaKnown RBP1.36□□□□□ -2.19
GYPA-205ENST00000508337 KRTAP10-4P60372 401 aaPredicted RBP1.35□□□□□ -2.19
GYPA-205ENST00000508337 PLCE1Q9P212 2302 aa1.34□□□□□ -2.19
GYPA-205ENST00000508337 PTPRQQ9UMZ3 2332 aa1.32□□□□□ -2.2
GYPA-205ENST00000508337 USF3Q68DE3 2245 aa1.32□□□□□ -2.2
GYPA-205ENST00000508337 ROS1P08922 2347 aa1.32□□□□□ -2.2
GYPA-205ENST00000508337 TOGARAM1Q9Y4F4 1720 aa1.32□□□□□ -2.2
GYPA-205ENST00000508337 PIEZO2Q9H5I5 2752 aa1.31□□□□□ -2.2
GYPA-205ENST00000508337 RPS27P42677 84 aaKnown RBP1.31□□□□□ -2.2
GYPA-205ENST00000508337 RPS27LQ71UM5 84 aaKnown RBP1.31□□□□□ -2.2
GYPA-205ENST00000508337 WFDC10BQ8IUB3 73 aa1.31□□□□□ -2.2
GYPA-205ENST00000508337 C4AP0C0L4 1744 aa1.3□□□□□ -2.2
GYPA-205ENST00000508337 NDUFA1O15239 70 aa1.3□□□□□ -2.2
GYPA-205ENST00000508337 HMCN1Q96RW7 5635 aa1.3□□□□□ -2.2
GYPA-205ENST00000508337 WNK2Q9Y3S1 2297 aa1.29□□□□□ -2.2
GYPA-205ENST00000508337 KAAG1Q9UBP8 84 aa1.29□□□□□ -2.2
GYPA-205ENST00000508337 PTPRZ1P23471 2315 aaPredicted RBP1.29□□□□□ -2.2
GYPA-205ENST00000508337 NFAT5O94916 1531 aa1.29□□□□□ -2.2
GYPA-205ENST00000508337 KIF21BO75037 1637 aa1.29□□□□□ -2.2
GYPA-205ENST00000508337 DDX60Q8IY21 1712 aaKnown RBP1.29□□□□□ -2.2
GYPA-205ENST00000508337 C2CD3Q4AC94 2353 aa1.28□□□□□ -2.2
GYPA-205ENST00000508337 LMO7Q8WWI1 1683 aa1.28□□□□□ -2.2
GYPA-205ENST00000508337 SPTBN2O15020 2390 aa1.28□□□□□ -2.2
GYPA-205ENST00000508337 ASH1LQ9NR48 2969 aaKnown RBP1.28□□□□□ -2.2
GYPA-205ENST00000508337 ATP7AQ04656 1500 aa1.27□□□□□ -2.21
GYPA-205ENST00000508337 WT1-ASQ06250 92 aa1.27□□□□□ -2.21
GYPA-205ENST00000508337 SAMD9LQ8IVG5 1584 aa1.26□□□□□ -2.21
GYPA-205ENST00000508337 PRLHP81277 87 aa1.25□□□□□ -2.21
GYPA-205ENST00000508337 C4BP0C0L5 1744 aa1.25□□□□□ -2.21
GYPA-205ENST00000508337 IQGAP1P46940 1657 aa1.24□□□□□ -2.21
GYPA-205ENST00000508337 SPTBN1Q01082 2364 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms