RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 SMCR5Q8TEV8 140 aa5.51□□□□□ -1.53
DDX41-209ENST00000508279 NDUFC2O95298 119 aa5.5□□□□□ -1.53
DDX41-209ENST00000508279 SPRR1AP35321 89 aa5.5□□□□□ -1.53
DDX41-209ENST00000508279 LINC00304Q8N9R0 145 aa5.5□□□□□ -1.53
DDX41-209ENST00000508279 OR13C6PQ8NH95 151 aa5.5□□□□□ -1.53
DDX41-209ENST00000508279 SPRR4Q96PI1 79 aa5.5□□□□□ -1.53
DDX41-209ENST00000508279 ZNF706Q9Y5V0 76 aaPredicted RBP5.5□□□□□ -1.53
DDX41-209ENST00000508279 UBR4Q5T4S7 5183 aa5.5□□□□□ -1.53
DDX41-209ENST00000508279 LRP2P98164 4655 aa5.49□□□□□ -1.53
DDX41-209ENST00000508279 S100A2P29034 98 aa5.49□□□□□ -1.53
DDX41-209ENST00000508279 SCGB1D4Q6XE38 83 aa5.49□□□□□ -1.53
DDX41-209ENST00000508279 LINC00308Q8TCZ7 52 aa5.49□□□□□ -1.53
DDX41-209ENST00000508279 TRAV23DV6A0A075B6W5 121 aa5.48□□□□□ -1.53
DDX41-209ENST00000508279 B5MCH6 92 aa5.48□□□□□ -1.53
DDX41-209ENST00000508279 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
DDX41-209ENST00000508279 ANKRD39Q53RE8 183 aa5.48□□□□□ -1.53
DDX41-209ENST00000508279 GAGE2AQ6NT46 116 aa5.48□□□□□ -1.53
DDX41-209ENST00000508279 LITAFQ99732 161 aa5.48□□□□□ -1.53
DDX41-209ENST00000508279 TIMM17BO60830 172 aa5.47□□□□□ -1.53
DDX41-209ENST00000508279 ERC2-IT1O76042 136 aa5.47□□□□□ -1.53
DDX41-209ENST00000508279 IGLV6-57P01721 117 aa5.47□□□□□ -1.53
DDX41-209ENST00000508279 RETNLBQ9BQ08 111 aa5.47□□□□□ -1.53
DDX41-209ENST00000508279 SPANXCQ9NY87 97 aa5.47□□□□□ -1.53
DDX41-209ENST00000508279 ZNF73O43830 326 aaPredicted RBP5.46□□□□□ -1.54
DDX41-209ENST00000508279 S100A6P06703 90 aa5.46□□□□□ -1.54
DDX41-209ENST00000508279 Q6ZRX8 168 aa5.46□□□□□ -1.54
DDX41-209ENST00000508279 HIST3H2BBQ8N257 126 aa5.46□□□□□ -1.54
DDX41-209ENST00000508279 Q9BRP9 147 aa5.46□□□□□ -1.54
DDX41-209ENST00000508279 LPAP08519 4548 aa5.45□□□□□ -1.54
DDX41-209ENST00000508279 IGLV9-49A0A0B4J1Y8 123 aa5.45□□□□□ -1.54
DDX41-209ENST00000508279 HINT1P49773 126 aaPredicted RBP5.45□□□□□ -1.54
DDX41-209ENST00000508279 JOSD1Q15040 202 aaPredicted RBP5.45□□□□□ -1.54
DDX41-209ENST00000508279 PCP2Q8IVA1 136 aa5.45□□□□□ -1.54
DDX41-209ENST00000508279 KRTAP9-2Q9BYQ4 174 aa5.45□□□□□ -1.54
DDX41-209ENST00000508279 Q8NBF4 154 aa5.44□□□□□ -1.54
DDX41-209ENST00000508279 HIST1H2BLQ99880 126 aa5.44□□□□□ -1.54
DDX41-209ENST00000508279 CBY1Q9Y3M2 126 aa5.44□□□□□ -1.54
DDX41-209ENST00000508279 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
DDX41-209ENST00000508279 HSBP1L1C9JCN9 74 aa5.43□□□□□ -1.54
DDX41-209ENST00000508279 AKR1D1P51857 326 aa5.43□□□□□ -1.54
DDX41-209ENST00000508279 MOBPQ13875 183 aa5.43□□□□□ -1.54
DDX41-209ENST00000508279 SPANXDQ9BXN6 97 aa5.43□□□□□ -1.54
DDX41-209ENST00000508279 LINC00518Q8N0U6 118 aa5.42□□□□□ -1.54
DDX41-209ENST00000508279 ST20-AS1Q8NBB2 130 aa5.42□□□□□ -1.54
DDX41-209ENST00000508279 COPS9Q8WXC6 57 aa5.42□□□□□ -1.54
DDX41-209ENST00000508279 KRTAP9-6A0A140TA67 174 aa5.41□□□□□ -1.54
DDX41-209ENST00000508279 A6NDN8 102 aa5.41□□□□□ -1.54
DDX41-209ENST00000508279 SNRPEP62304 92 aaKnown RBP5.41□□□□□ -1.54
DDX41-209ENST00000508279 LINC00483Q53H64 154 aa5.41□□□□□ -1.54
DDX41-209ENST00000508279 C9orf153Q5TBE3 101 aa5.41□□□□□ -1.54
DDX41-209ENST00000508279 MUSTN1Q8IVN3 82 aa5.41□□□□□ -1.54
DDX41-209ENST00000508279 SCGB1D1O95968 90 aa5.4□□□□□ -1.54
DDX41-209ENST00000508279 IFITM1P13164 125 aa5.4□□□□□ -1.54
DDX41-209ENST00000508279 C6orf99Q4VX62 202 aa5.4□□□□□ -1.54
DDX41-209ENST00000508279 SPAG11AQ6PDA7 123 aa5.4□□□□□ -1.54
DDX41-209ENST00000508279 COX7BP24311 80 aa5.39□□□□□ -1.55
DDX41-209ENST00000508279 IGLV7-46A0A075B6I9 117 aa5.38□□□□□ -1.55
DDX41-209ENST00000508279 Q6ZVH6 145 aa5.38□□□□□ -1.55
DDX41-209ENST00000508279 DEFB105AQ8NG35 78 aa5.38□□□□□ -1.55
DDX41-209ENST00000508279 DHRS4-AS1Q9P1J3 65 aa5.38□□□□□ -1.55
DDX41-209ENST00000508279 ELOF1P60002 83 aaKnown RBP5.37□□□□□ -1.55
DDX41-209ENST00000508279 TAL2Q16559 108 aa5.36□□□□□ -1.55
DDX41-209ENST00000508279 SSBP3-AS1Q7Z2R9 100 aa5.36□□□□□ -1.55
DDX41-209ENST00000508279 CDIP1Q9H305 208 aa5.36□□□□□ -1.55
DDX41-209ENST00000508279 RNF213Q63HN8 5207 aa5.35□□□□□ -1.55
DDX41-209ENST00000508279 TRAV13-2A0A0B4J235 113 aa5.35□□□□□ -1.55
DDX41-209ENST00000508279 C5orf52A6NGY3 159 aa5.35□□□□□ -1.55
DDX41-209ENST00000508279 SPINK1P00995 79 aa5.35□□□□□ -1.55
DDX41-209ENST00000508279 CTAG1AP78358 180 aa5.35□□□□□ -1.55
DDX41-209ENST00000508279 HRCT1Q6UXD1 115 aa5.35□□□□□ -1.55
DDX41-209ENST00000508279 A0A1B0GWB2 263 aa5.34□□□□□ -1.55
DDX41-209ENST00000508279 Q1RN00 199 aa5.34□□□□□ -1.55
DDX41-209ENST00000508279 SLC25A34Q6PIV7 304 aa5.34□□□□□ -1.55
DDX41-209ENST00000508279 SMIM11BQ8TCY0 68 aa5.34□□□□□ -1.55
DDX41-209ENST00000508279 LAMTOR3Q9UHA4 124 aa5.34□□□□□ -1.55
DDX41-209ENST00000508279 A4D1N5 150 aa5.33□□□□□ -1.56
DDX41-209ENST00000508279 HIST1H4GQ99525 98 aa5.33□□□□□ -1.56
DDX41-209ENST00000508279 C12orf57Q99622 126 aa5.33□□□□□ -1.56
DDX41-209ENST00000508279 TRBV7-6A0A0J9YX20 115 aa5.32□□□□□ -1.56
DDX41-209ENST00000508279 TPRXLQ17RH7 258 aa5.32□□□□□ -1.56
DDX41-209ENST00000508279 TEX49A0A1B0GTD5 131 aa5.31□□□□□ -1.56
DDX41-209ENST00000508279 COX8AP10176 69 aa5.31□□□□□ -1.56
DDX41-209ENST00000508279 SPRR1BP22528 89 aa5.31□□□□□ -1.56
DDX41-209ENST00000508279 FP248Q71RG6 208 aaPredicted RBP5.31□□□□□ -1.56
DDX41-209ENST00000508279 Q8N377 158 aa5.31□□□□□ -1.56
DDX41-209ENST00000508279 C14orf144Q96I85 54 aa5.31□□□□□ -1.56
DDX41-209ENST00000508279 PAM16Q9Y3D7 125 aa5.31□□□□□ -1.56
DDX41-209ENST00000508279 SLC25A20O43772 301 aa5.3□□□□□ -1.56
DDX41-209ENST00000508279 VAMP3Q15836 100 aa5.3□□□□□ -1.56
DDX41-209ENST00000508279 SPATA45Q537H7 98 aa5.3□□□□□ -1.56
DDX41-209ENST00000508279 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
DDX41-209ENST00000508279 GHRHP01286 108 aa5.29□□□□□ -1.56
DDX41-209ENST00000508279 KRTAP4-12Q9BQ66 201 aa5.29□□□□□ -1.56
DDX41-209ENST00000508279 VAMP8Q9BV40 100 aa5.29□□□□□ -1.56
DDX41-209ENST00000508279 NHP2Q9NX24 153 aaKnown RBP5.29□□□□□ -1.56
DDX41-209ENST00000508279 H7C2G1 150 aa5.28□□□□□ -1.56
DDX41-209ENST00000508279 RPS29P62273 56 aaKnown RBP5.28□□□□□ -1.56
DDX41-209ENST00000508279 A0A0G2JQZ4 141 aa5.27□□□□□ -1.57
DDX41-209ENST00000508279 LINC01547P58512 204 aaPredicted RBP5.27□□□□□ -1.57
DDX41-209ENST00000508279 PRO1933Q9H354 126 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms