RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 ARHGAP32A7KAX9 2087 aa4.43□□□□□ -1.7
PDGFRA-206ENST00000508170 CFAP46Q8IYW2 2715 aa4.42□□□□□ -1.7
PDGFRA-206ENST00000508170 IGKV3OR2-268A0A0C4DH90 116 aa4.42□□□□□ -1.7
PDGFRA-206ENST00000508170 IGSF10Q6WRI0 2623 aa4.42□□□□□ -1.7
PDGFRA-206ENST00000508170 SPINT4Q6UDR6 99 aa4.42□□□□□ -1.7
PDGFRA-206ENST00000508170 SMIM2Q9BVW6 85 aa4.42□□□□□ -1.7
PDGFRA-206ENST00000508170 LYNX1G3V0Z9 82 aa4.41□□□□□ -1.7
PDGFRA-206ENST00000508170 K7EIM0 57 aa4.41□□□□□ -1.7
PDGFRA-206ENST00000508170 LYNX1P0DP58 116 aa4.41□□□□□ -1.7
PDGFRA-206ENST00000508170 COX6B1P14854 86 aa4.41□□□□□ -1.7
PDGFRA-206ENST00000508170 PRB3Q04118 309 aaPredicted RBP4.41□□□□□ -1.7
PDGFRA-206ENST00000508170 TEX15Q9BXT5 2789 aa4.4□□□□□ -1.71
PDGFRA-206ENST00000508170 COL6A6A6NMZ7 2263 aa4.4□□□□□ -1.71
PDGFRA-206ENST00000508170 IGKV3-20P01619 116 aa4.4□□□□□ -1.71
PDGFRA-206ENST00000508170 PDE6GP18545 87 aa4.4□□□□□ -1.71
PDGFRA-206ENST00000508170 CCL18P55774 89 aa4.4□□□□□ -1.71
PDGFRA-206ENST00000508170 HRNRQ86YZ3 2850 aaPredicted RBP4.39□□□□□ -1.71
PDGFRA-206ENST00000508170 CR1P17927 2039 aa4.39□□□□□ -1.71
PDGFRA-206ENST00000508170 A0A087WYN8 130 aa4.39□□□□□ -1.71
PDGFRA-206ENST00000508170 DNAL4O96015 105 aa4.39□□□□□ -1.71
PDGFRA-206ENST00000508170 MGPP08493 103 aa4.39□□□□□ -1.71
PDGFRA-206ENST00000508170 C14orf177Q52M58 125 aa4.39□□□□□ -1.71
PDGFRA-206ENST00000508170 TMEM263Q8WUH6 116 aaKnown RBP4.38□□□□□ -1.71
PDGFRA-206ENST00000508170 RPL39LQ96EH5 51 aaKnown RBP4.38□□□□□ -1.71
PDGFRA-206ENST00000508170 PLAC8Q9NZF1 115 aa4.38□□□□□ -1.71
PDGFRA-206ENST00000508170 WNK2Q9Y3S1 2297 aa4.38□□□□□ -1.71
PDGFRA-206ENST00000508170 M0R1W7 72 aa4.37□□□□□ -1.71
PDGFRA-206ENST00000508170 TENM4Q6N022 2769 aa4.37□□□□□ -1.71
PDGFRA-206ENST00000508170 C4orf3Q8WVX3 66 aa4.37□□□□□ -1.71
PDGFRA-206ENST00000508170 ZFHX3Q15911 3703 aa4.36□□□□□ -1.71
PDGFRA-206ENST00000508170 PRB1P04280 392 aa4.36□□□□□ -1.71
PDGFRA-206ENST00000508170 KRTAP21-3Q3LHN1 58 aa4.36□□□□□ -1.71
PDGFRA-206ENST00000508170 DEFB104AQ8WTQ1 72 aa4.36□□□□□ -1.71
PDGFRA-206ENST00000508170 FLNCQ14315 2725 aa4.36□□□□□ -1.71
PDGFRA-206ENST00000508170 IGKV2D-30A0A075B6S6 120 aa4.36□□□□□ -1.71
PDGFRA-206ENST00000508170 KRTAP7-1Q8IUC3 87 aa4.36□□□□□ -1.71
PDGFRA-206ENST00000508170 MED13LQ71F56 2210 aa4.35□□□□□ -1.71
PDGFRA-206ENST00000508170 SPTBN1Q01082 2364 aaKnown RBP4.35□□□□□ -1.71
PDGFRA-206ENST00000508170 UTP20O75691 2785 aaKnown RBP4.35□□□□□ -1.71
PDGFRA-206ENST00000508170 NDPQ00604 133 aa4.35□□□□□ -1.71
PDGFRA-206ENST00000508170 CREBBPQ92793 2442 aa4.35□□□□□ -1.71
PDGFRA-206ENST00000508170 MINOS1Q5TGZ0 78 aa4.34□□□□□ -1.71
PDGFRA-206ENST00000508170 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.34□□□□□ -1.71
PDGFRA-206ENST00000508170 FBN2P35556 2912 aa4.34□□□□□ -1.71
PDGFRA-206ENST00000508170 CSMD1Q96PZ7 3565 aa4.34□□□□□ -1.71
PDGFRA-206ENST00000508170 HRES1P13985 223 aa4.34□□□□□ -1.72
PDGFRA-206ENST00000508170 RPL39P62891 51 aaKnown RBP4.34□□□□□ -1.72
PDGFRA-206ENST00000508170 NREPQ16612 68 aa4.34□□□□□ -1.72
PDGFRA-206ENST00000508170 UBR5O95071 2799 aaPredicted RBP4.34□□□□□ -1.72
PDGFRA-206ENST00000508170 A0A0G2JQZ4 141 aa4.33□□□□□ -1.72
PDGFRA-206ENST00000508170 IGIPA6NJ69 53 aa4.33□□□□□ -1.72
PDGFRA-206ENST00000508170 J3QKU1 62 aa4.33□□□□□ -1.72
PDGFRA-206ENST00000508170 KLK9Q2XQG4 91 aa4.33□□□□□ -1.72
PDGFRA-206ENST00000508170 LINC00846Q9NV44 126 aa4.33□□□□□ -1.72
PDGFRA-206ENST00000508170 KLK9Q9UKQ9 250 aa4.33□□□□□ -1.72
PDGFRA-206ENST00000508170 SPINK7P58062 85 aa4.33□□□□□ -1.72
PDGFRA-206ENST00000508170 LY6EQ16553 131 aa4.33□□□□□ -1.72
PDGFRA-206ENST00000508170 TRBV6-4A0A1B0GX49 114 aa4.32□□□□□ -1.72
PDGFRA-206ENST00000508170 JMJD7-PLA2G4BH0Y9G9 81 aa4.32□□□□□ -1.72
PDGFRA-206ENST00000508170 PRR9Q5T870 116 aa4.32□□□□□ -1.72
PDGFRA-206ENST00000508170 WFDC10AQ9H1F0 79 aa4.32□□□□□ -1.72
PDGFRA-206ENST00000508170 HIVEP3Q5T1R4 2406 aa4.32□□□□□ -1.72
PDGFRA-206ENST00000508170 UQCR11O14957 56 aa4.31□□□□□ -1.72
PDGFRA-206ENST00000508170 RNASE3P12724 160 aaKnown RBP4.31□□□□□ -1.72
PDGFRA-206ENST00000508170 CRYBG3Q68DQ2 2970 aa4.31□□□□□ -1.72
PDGFRA-206ENST00000508170 TRAV21A0A0B4J279 112 aa4.31□□□□□ -1.72
PDGFRA-206ENST00000508170 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
PDGFRA-206ENST00000508170 SPRR4Q96PI1 79 aa4.31□□□□□ -1.72
PDGFRA-206ENST00000508170 POLQO75417 2590 aa4.31□□□□□ -1.72
PDGFRA-206ENST00000508170 SVEP1Q4LDE5 3571 aa4.3□□□□□ -1.72
PDGFRA-206ENST00000508170 A0A087WTM6 91 aa4.3□□□□□ -1.72
PDGFRA-206ENST00000508170 TPRXLQ17RH7 258 aa4.3□□□□□ -1.72
PDGFRA-206ENST00000508170 ENHOQ6UWT2 76 aa4.3□□□□□ -1.72
PDGFRA-206ENST00000508170 AKAP6Q13023 2319 aa4.3□□□□□ -1.72
PDGFRA-206ENST00000508170 CENPEQ02224 2701 aa4.3□□□□□ -1.72
PDGFRA-206ENST00000508170 NOTCH2Q04721 2471 aa4.3□□□□□ -1.72
PDGFRA-206ENST00000508170 I3L3M4 83 aa4.3□□□□□ -1.72
PDGFRA-206ENST00000508170 NDUFB1O75438 58 aa4.29□□□□□ -1.72
PDGFRA-206ENST00000508170 LINC00208Q96KT6 92 aa4.29□□□□□ -1.72
PDGFRA-206ENST00000508170 NBDYA0A0U1RRE5 68 aa4.29□□□□□ -1.72
PDGFRA-206ENST00000508170 POLR2KP53803 58 aaKnown RBP4.29□□□□□ -1.72
PDGFRA-206ENST00000508170 SPACA4Q8TDM5 124 aa4.29□□□□□ -1.72
PDGFRA-206ENST00000508170 MAP1AP78559 2803 aaPredicted RBP4.28□□□□□ -1.72
PDGFRA-206ENST00000508170 G3V318 75 aa4.27□□□□□ -1.73
PDGFRA-206ENST00000508170 H0Y9P7 68 aa4.27□□□□□ -1.73
PDGFRA-206ENST00000508170 MAPK1IP1LQ8NDC0 245 aa4.27□□□□□ -1.73
PDGFRA-206ENST00000508170 LRRK2Q5S007 2527 aa4.27□□□□□ -1.73
PDGFRA-206ENST00000508170 LINC00315P59091 139 aa4.27□□□□□ -1.73
PDGFRA-206ENST00000508170 DEFB1P60022 68 aa4.27□□□□□ -1.73
PDGFRA-206ENST00000508170 C5orf56Q8N8D9 126 aa4.27□□□□□ -1.73
PDGFRA-206ENST00000508170 CELSR2Q9HCU4 2923 aa4.26□□□□□ -1.73
PDGFRA-206ENST00000508170 ABCA2Q9BZC7 2435 aa4.26□□□□□ -1.73
PDGFRA-206ENST00000508170 SPATA8Q6RVD6 105 aa4.26□□□□□ -1.73
PDGFRA-206ENST00000508170 CSMD2Q7Z408 3487 aa4.26□□□□□ -1.73
PDGFRA-206ENST00000508170 CELSR1Q9NYQ6 3014 aa4.26□□□□□ -1.73
PDGFRA-206ENST00000508170 NBPF19A0A087WUL8 3843 aa4.25□□□□□ -1.73
PDGFRA-206ENST00000508170 LCE6AA0A183 80 aa4.25□□□□□ -1.73
PDGFRA-206ENST00000508170 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
PDGFRA-206ENST00000508170 WFDC9Q8NEX5 89 aa4.25□□□□□ -1.73
PDGFRA-206ENST00000508170 VPS13CQ709C8 3753 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms