RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 Q6ZRP5 223 aa3.24□□□□□ -1.89
HMGB3P16-201ENST00000508037 Q6ZTC4 211 aa3.24□□□□□ -1.89
HMGB3P16-201ENST00000508037 Q8N9L7 120 aa3.24□□□□□ -1.89
HMGB3P16-201ENST00000508037 DEFB105AQ8NG35 78 aa3.24□□□□□ -1.89
HMGB3P16-201ENST00000508037 BRK1Q8WUW1 75 aa3.24□□□□□ -1.89
HMGB3P16-201ENST00000508037 SPRR4Q96PI1 79 aa3.24□□□□□ -1.89
HMGB3P16-201ENST00000508037 KRTAP17-1Q9BYP8 105 aa3.24□□□□□ -1.89
HMGB3P16-201ENST00000508037 V9GYY9 64 aa3.24□□□□□ -1.89
HMGB3P16-201ENST00000508037 TLN2Q9Y4G6 2542 aa3.23□□□□□ -1.89
HMGB3P16-201ENST00000508037 H3BPC8 53 aa3.23□□□□□ -1.89
HMGB3P16-201ENST00000508037 SPRR1AP35321 89 aa3.23□□□□□ -1.89
HMGB3P16-201ENST00000508037 MP68P56378 58 aa3.23□□□□□ -1.89
HMGB3P16-201ENST00000508037 SMIM29Q86T20 159 aa3.23□□□□□ -1.89
HMGB3P16-201ENST00000508037 HIGD2AQ9BW72 106 aa3.23□□□□□ -1.89
HMGB3P16-201ENST00000508037 LINC00474Q9P2X8 69 aa3.23□□□□□ -1.89
HMGB3P16-201ENST00000508037 FAM208BQ5VWN6 2430 aa3.23□□□□□ -1.89
HMGB3P16-201ENST00000508037 PTPN13Q12923 2485 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 CHD8Q9HCK8 2581 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 IGLV1-50A0A075B6I6 118 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 hDV103S1A0JD37 113 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 RPL37AP8A6NKH3 93 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 HCG22E2RYF7 251 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 DNAH10OSP0CZ25 163 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 Q1T7F1 81 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 MPLKIPQ8TAP9 179 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 CYP4F30PQ9H0H9 118 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 FAM30AQ9NZY2 134 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 ASH1LQ9NR48 2969 aaKnown RBP3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 SPTBN4Q9H254 2564 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 RELNP78509 3460 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 CELSR1Q9NYQ6 3014 aa3.22□□□□□ -1.89
HMGB3P16-201ENST00000508037 A0A1W2PNM2 257 aa3.21□□□□□ -1.9
HMGB3P16-201ENST00000508037 KRTAP4-16G5E9R7 235 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P16-201ENST00000508037 SERTAD4-AS1Q5TG53 156 aa3.21□□□□□ -1.9
HMGB3P16-201ENST00000508037 C1orf195Q5TG92 126 aa3.21□□□□□ -1.9
HMGB3P16-201ENST00000508037 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
HMGB3P16-201ENST00000508037 ZCCHC13Q8WW36 166 aaKnown RBP3.21□□□□□ -1.9
HMGB3P16-201ENST00000508037 DEFB131BA0A096LNP1 70 aa3.2□□□□□ -1.9
HMGB3P16-201ENST00000508037 DSCR10P59022 87 aa3.2□□□□□ -1.9
HMGB3P16-201ENST00000508037 UBE2BP63146 152 aa3.2□□□□□ -1.9
HMGB3P16-201ENST00000508037 REG3GQ6UW15 175 aa3.2□□□□□ -1.9
HMGB3P16-201ENST00000508037 MRPL55Q7Z7F7 128 aaKnown RBP3.2□□□□□ -1.9
HMGB3P16-201ENST00000508037 Q9BRP9 147 aa3.2□□□□□ -1.9
HMGB3P16-201ENST00000508037 PKIGQ9Y2B9 76 aa3.2□□□□□ -1.9
HMGB3P16-201ENST00000508037 JMJD1CQ15652 2540 aa3.2□□□□□ -1.9
HMGB3P16-201ENST00000508037 POLQO75417 2590 aa3.19□□□□□ -1.9
HMGB3P16-201ENST00000508037 CACNA1AO00555 2505 aa3.19□□□□□ -1.9
HMGB3P16-201ENST00000508037 CHD6Q8TD26 2715 aa3.19□□□□□ -1.9
HMGB3P16-201ENST00000508037 IGLV8-61A0A075B6I0 122 aa3.19□□□□□ -1.9
HMGB3P16-201ENST00000508037 J3QKU1 62 aa3.19□□□□□ -1.9
HMGB3P16-201ENST00000508037 FAM229BQ4G0N7 80 aa3.19□□□□□ -1.9
HMGB3P16-201ENST00000508037 PRR15Q8IV56 129 aa3.19□□□□□ -1.9
HMGB3P16-201ENST00000508037 SPANXA2-OT1Q8N9U9 137 aa3.19□□□□□ -1.9
HMGB3P16-201ENST00000508037 C11orf45Q8TAV5 145 aa3.19□□□□□ -1.9
HMGB3P16-201ENST00000508037 MYO18BQ8IUG5 2567 aa3.19□□□□□ -1.9
HMGB3P16-201ENST00000508037 SVEP1Q4LDE5 3571 aa3.19□□□□□ -1.9
HMGB3P16-201ENST00000508037 SONP18583 2426 aaKnown RBP3.18□□□□□ -1.9
HMGB3P16-201ENST00000508037 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P16-201ENST00000508037 K7EQZ3 153 aa3.18□□□□□ -1.9
HMGB3P16-201ENST00000508037 PSCAO43653 123 aa3.18□□□□□ -1.9
HMGB3P16-201ENST00000508037 C1orf64Q8NEQ6 169 aa3.18□□□□□ -1.9
HMGB3P16-201ENST00000508037 LINC00476Q8WZB0 136 aa3.18□□□□□ -1.9
HMGB3P16-201ENST00000508037 FN1P02751 2386 aaKnown RBP3.18□□□□□ -1.9
HMGB3P16-201ENST00000508037 LRRK2Q5S007 2527 aa3.18□□□□□ -1.9
HMGB3P16-201ENST00000508037 ITPR1Q14643 2758 aa3.17□□□□□ -1.9
HMGB3P16-201ENST00000508037 PIEZO1Q92508 2521 aa3.17□□□□□ -1.9
HMGB3P16-201ENST00000508037 ZNF462Q96JM2 2506 aa3.17□□□□□ -1.9
HMGB3P16-201ENST00000508037 ST20-AS1Q8NBB2 130 aa3.17□□□□□ -1.9
HMGB3P16-201ENST00000508037 EPG5Q9HCE0 2579 aa3.17□□□□□ -1.9
HMGB3P16-201ENST00000508037 MXRA5Q9NR99 2828 aa3.17□□□□□ -1.9
HMGB3P16-201ENST00000508037 ZFHX3Q15911 3703 aa3.17□□□□□ -1.9
HMGB3P16-201ENST00000508037 TEX15Q9BXT5 2789 aa3.17□□□□□ -1.9
HMGB3P16-201ENST00000508037 ITPR3Q14573 2671 aa3.16□□□□□ -1.9
HMGB3P16-201ENST00000508037 TRAV22A0A0B4J277 110 aa3.16□□□□□ -1.9
HMGB3P16-201ENST00000508037 INAFM1C9JVW0 142 aa3.16□□□□□ -1.9
HMGB3P16-201ENST00000508037 IGFL1Q6UW32 110 aa3.16□□□□□ -1.9
HMGB3P16-201ENST00000508037 SMR3AQ99954 134 aa3.16□□□□□ -1.9
HMGB3P16-201ENST00000508037 B9D2Q9BPU9 175 aa3.16□□□□□ -1.9
HMGB3P16-201ENST00000508037 LIMD2Q9BT23 127 aa3.16□□□□□ -1.9
HMGB3P16-201ENST00000508037 RETNQ9HD89 108 aa3.16□□□□□ -1.9
HMGB3P16-201ENST00000508037 LINC00588Q9Y4M8 146 aa3.16□□□□□ -1.9
HMGB3P16-201ENST00000508037 IGSF10Q6WRI0 2623 aa3.16□□□□□ -1.9
HMGB3P16-201ENST00000508037 SETXQ7Z333 2677 aaKnown RBP3.16□□□□□ -1.9
HMGB3P16-201ENST00000508037 HIVEP2P31629 2446 aa3.15□□□□□ -1.9
HMGB3P16-201ENST00000508037 FBN2P35556 2912 aa3.15□□□□□ -1.9
HMGB3P16-201ENST00000508037 COL12A1Q99715 3063 aa3.15□□□□□ -1.9
HMGB3P16-201ENST00000508037 MAP1AP78559 2803 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P16-201ENST00000508037 FAM168BA1KXE4 195 aa3.15□□□□□ -1.91
HMGB3P16-201ENST00000508037 H0Y9J4 135 aa3.15□□□□□ -1.91
HMGB3P16-201ENST00000508037 UBE2AP49459 152 aa3.15□□□□□ -1.91
HMGB3P16-201ENST00000508037 KRTAP15-1Q3LI76 137 aa3.15□□□□□ -1.91
HMGB3P16-201ENST00000508037 C14orf177Q52M58 125 aa3.15□□□□□ -1.91
HMGB3P16-201ENST00000508037 CASC2Q6XLA1 102 aa3.15□□□□□ -1.91
HMGB3P16-201ENST00000508037 ABCA12Q86UK0 2595 aa3.15□□□□□ -1.91
HMGB3P16-201ENST00000508037 CFAP46Q8IYW2 2715 aa3.15□□□□□ -1.91
HMGB3P16-201ENST00000508037 UTP20O75691 2785 aaKnown RBP3.15□□□□□ -1.91
HMGB3P16-201ENST00000508037 ZANQ9Y493 2812 aa3.15□□□□□ -1.91
HMGB3P16-201ENST00000508037 FLNCQ14315 2725 aa3.14□□□□□ -1.91
HMGB3P16-201ENST00000508037 A0A087WSZ3 146 aa3.14□□□□□ -1.91
HMGB3P16-201ENST00000508037 A8MWP4 228 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms