RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 FAM19A1Q7Z5A9 133 aa12.35□□□□□ -0.43
USP53-203ENST00000507597 ZNF861PO60384 105 aa12.34□□□□□ -0.43
USP53-203ENST00000507597 LINC00337Q8N6G1 96 aa12.34□□□□□ -0.43
USP53-203ENST00000507597 INAFM2P0DMQ5 153 aa12.33□□□□□ -0.44
USP53-203ENST00000507597 KRTAP10-4P60372 401 aaPredicted RBP12.33□□□□□ -0.44
USP53-203ENST00000507597 DIRC1Q969H9 104 aa12.33□□□□□ -0.44
USP53-203ENST00000507597 RAB37Q96AX2 223 aa12.33□□□□□ -0.44
USP53-203ENST00000507597 ZNF73O43830 326 aaPredicted RBP12.31□□□□□ -0.44
USP53-203ENST00000507597 SPRR1AP35321 89 aa12.31□□□□□ -0.44
USP53-203ENST00000507597 H0Y9J4 135 aa12.3□□□□□ -0.44
USP53-203ENST00000507597 A0A0B4J2C4 111 aa12.28□□□□□ -0.44
USP53-203ENST00000507597 FAT1Q14517 4588 aa12.28□□□□□ -0.44
USP53-203ENST00000507597 VAMP3Q15836 100 aa12.27□□□□□ -0.45
USP53-203ENST00000507597 M0R143 59 aa12.26□□□□□ -0.45
USP53-203ENST00000507597 CFC1BP0CG36 223 aa12.26□□□□□ -0.45
USP53-203ENST00000507597 CFC1P0CG37 223 aa12.26□□□□□ -0.45
USP53-203ENST00000507597 TRBV7-6A0A0J9YX20 115 aa12.25□□□□□ -0.45
USP53-203ENST00000507597 RPL13AP40429 203 aaKnown RBP12.25□□□□□ -0.45
USP53-203ENST00000507597 FXYD2P54710 66 aa12.24□□□□□ -0.45
USP53-203ENST00000507597 VPS13BQ7Z7G8 4022 aa12.23□□□□□ -0.45
USP53-203ENST00000507597 B5MCH6 92 aa12.23□□□□□ -0.45
USP53-203ENST00000507597 KRTAP4-16G5E9R7 235 aaPredicted RBP12.23□□□□□ -0.45
USP53-203ENST00000507597 PRLHP81277 87 aa12.23□□□□□ -0.45
USP53-203ENST00000507597 C6orf99Q4VX62 202 aa12.23□□□□□ -0.45
USP53-203ENST00000507597 KRTAP4-5Q9BYR2 181 aa12.23□□□□□ -0.45
USP53-203ENST00000507597 COX7BP24311 80 aa12.22□□□□□ -0.45
USP53-203ENST00000507597 CTAG1AP78358 180 aa12.22□□□□□ -0.45
USP53-203ENST00000507597 Q6ZRX8 168 aa12.22□□□□□ -0.45
USP53-203ENST00000507597 KRTAP13-1Q8IUC0 172 aa12.22□□□□□ -0.45
USP53-203ENST00000507597 SMIM11BQ8TCY0 68 aa12.22□□□□□ -0.45
USP53-203ENST00000507597 HIGD2AQ9BW72 106 aa12.22□□□□□ -0.45
USP53-203ENST00000507597 PRO1854Q9UHT4 67 aa12.22□□□□□ -0.45
USP53-203ENST00000507597 A0A1B0GWB2 263 aa12.21□□□□□ -0.45
USP53-203ENST00000507597 NHP2Q9NX24 153 aaKnown RBP12.21□□□□□ -0.45
USP53-203ENST00000507597 ABCA13Q86UQ4 5058 aa12.21□□□□□ -0.46
USP53-203ENST00000507597 SRRM2Q9UQ35 2752 aaKnown RBP12.2□□□□□ -0.46
USP53-203ENST00000507597 Q1RN00 199 aa12.2□□□□□ -0.46
USP53-203ENST00000507597 BVES-AS1Q5T3Y7 98 aa12.2□□□□□ -0.46
USP53-203ENST00000507597 DHRS4-AS1Q9P1J3 65 aa12.2□□□□□ -0.46
USP53-203ENST00000507597 ZNF706Q9Y5V0 76 aaPredicted RBP12.2□□□□□ -0.46
USP53-203ENST00000507597 ELOF1P60002 83 aaKnown RBP12.18□□□□□ -0.46
USP53-203ENST00000507597 H7C2G1 150 aa12.17□□□□□ -0.46
USP53-203ENST00000507597 SLC25A20O43772 301 aa12.17□□□□□ -0.46
USP53-203ENST00000507597 SNCGO76070 127 aa12.17□□□□□ -0.46
USP53-203ENST00000507597 OXTP01178 125 aa12.16□□□□□ -0.46
USP53-203ENST00000507597 SMCR5Q8TEV8 140 aa12.16□□□□□ -0.46
USP53-203ENST00000507597 H0YGX0 51 aa12.12□□□□□ -0.47
USP53-203ENST00000507597 COX6CP09669 75 aa12.11□□□□□ -0.47
USP53-203ENST00000507597 Q9BRP9 147 aa12.1□□□□□ -0.47
USP53-203ENST00000507597 PSMB2P49721 201 aa12.09□□□□□ -0.47
USP53-203ENST00000507597 KRTAP29-1A8MX34 341 aaPredicted RBP12.07□□□□□ -0.48
USP53-203ENST00000507597 LINC01600Q96MT4 127 aa12.07□□□□□ -0.48
USP53-203ENST00000507597 K7ERJ3 54 aa12.06□□□□□ -0.48
USP53-203ENST00000507597 FAM229BQ4G0N7 80 aa12.06□□□□□ -0.48
USP53-203ENST00000507597 SPRR4Q96PI1 79 aa12.06□□□□□ -0.48
USP53-203ENST00000507597 hADV29S1A0JD25 119 aa12.05□□□□□ -0.48
USP53-203ENST00000507597 BATFQ16520 125 aa12.05□□□□□ -0.48
USP53-203ENST00000507597 LINC00575Q6W349 94 aa12.05□□□□□ -0.48
USP53-203ENST00000507597 CRYGAP11844 174 aa12.04□□□□□ -0.48
USP53-203ENST00000507597 J3QL48 77 aa12.03□□□□□ -0.48
USP53-203ENST00000507597 ERC2-IT1O76042 136 aa12.03□□□□□ -0.48
USP53-203ENST00000507597 A0A1B0GX51 115 aa12.02□□□□□ -0.49
USP53-203ENST00000507597 TSPAN13O95857 204 aa12.02□□□□□ -0.49
USP53-203ENST00000507597 GHRHP01286 108 aa12.02□□□□□ -0.49
USP53-203ENST00000507597 GAGE2AQ6NT46 116 aa12.02□□□□□ -0.49
USP53-203ENST00000507597 KRTAP1-4P0C5Y4 121 aa12.01□□□□□ -0.49
USP53-203ENST00000507597 SCGB1C2P0DMR2 95 aa12.01□□□□□ -0.49
USP53-203ENST00000507597 TRIAP1O43715 76 aa12□□□□□ -0.49
USP53-203ENST00000507597 LINC00483Q53H64 154 aa11.98□□□□□ -0.49
USP53-203ENST00000507597 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.98□□□□□ -0.49
USP53-203ENST00000507597 PKHD1L1Q86WI1 4243 aa11.97□□□□□ -0.49
USP53-203ENST00000507597 TEX49A0A1B0GTD5 131 aa11.97□□□□□ -0.49
USP53-203ENST00000507597 OCIAD2Q56VL3 154 aa11.97□□□□□ -0.49
USP53-203ENST00000507597 LYRM7Q5U5X0 104 aa11.97□□□□□ -0.49
USP53-203ENST00000507597 FLG2Q5D862 2391 aaPredicted RBP11.96□□□□□ -0.49
USP53-203ENST00000507597 PRR26Q8N8Z3 221 aa11.95□□□□□ -0.5
USP53-203ENST00000507597 ST20-AS1Q8NBB2 130 aa11.95□□□□□ -0.5
USP53-203ENST00000507597 DEFB105AQ8NG35 78 aa11.95□□□□□ -0.5
USP53-203ENST00000507597 LAMTOR3Q9UHA4 124 aa11.95□□□□□ -0.5
USP53-203ENST00000507597 PCP4L1A6NKN8 68 aa11.94□□□□□ -0.5
USP53-203ENST00000507597 DNAL4O96015 105 aa11.94□□□□□ -0.5
USP53-203ENST00000507597 SPRR1BP22528 89 aa11.94□□□□□ -0.5
USP53-203ENST00000507597 TYMSOSQ8TAI1 123 aa11.94□□□□□ -0.5
USP53-203ENST00000507597 PPDPFLQ8WWR9 84 aa11.94□□□□□ -0.5
USP53-203ENST00000507597 H3BQ85 93 aa11.93□□□□□ -0.5
USP53-203ENST00000507597 Q6ZQY7 126 aa11.93□□□□□ -0.5
USP53-203ENST00000507597 ANAPC11Q9NYG5 84 aa11.93□□□□□ -0.5
USP53-203ENST00000507597 KRTAP10-8P60410 259 aa11.92□□□□□ -0.5
USP53-203ENST00000507597 IGLV5-48A0A075B6I7 105 aa11.91□□□□□ -0.5
USP53-203ENST00000507597 KRTAP3-3Q9BYR6 98 aa11.91□□□□□ -0.5
USP53-203ENST00000507597 KRTAP3-2Q9BYR7 98 aa11.91□□□□□ -0.5
USP53-203ENST00000507597 A0A087X002 238 aa11.89□□□□□ -0.51
USP53-203ENST00000507597 COL5A1-AS1Q5SY13 56 aa11.88□□□□□ -0.51
USP53-203ENST00000507597 SSBP3-AS1Q7Z2R9 100 aa11.88□□□□□ -0.51
USP53-203ENST00000507597 CLEC2BQ92478 149 aa11.88□□□□□ -0.51
USP53-203ENST00000507597 SNHG12Q9BXW3 62 aa11.88□□□□□ -0.51
USP53-203ENST00000507597 FAM218AQ96MZ4 157 aa11.87□□□□□ -0.51
USP53-203ENST00000507597 IGLV9-49A0A0B4J1Y8 123 aa11.86□□□□□ -0.51
USP53-203ENST00000507597 F8WEM9 126 aa11.86□□□□□ -0.51
USP53-203ENST00000507597 C9orf118A6NHY6 69 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms