RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 LINC00158P58513 81 aa5.73□□□□□ -1.49
PDGFRA-205ENST00000507536 RHEBQ15382 184 aa5.73□□□□□ -1.49
PDGFRA-205ENST00000507536 KRTAP19-2Q3LHN2 52 aa5.73□□□□□ -1.49
PDGFRA-205ENST00000507536 COX19Q49B96 90 aa5.73□□□□□ -1.49
PDGFRA-205ENST00000507536 TMEM170BQ5T4T1 132 aa5.73□□□□□ -1.49
PDGFRA-205ENST00000507536 BAGE3Q86Y29 109 aa5.73□□□□□ -1.49
PDGFRA-205ENST00000507536 Q8N377 158 aa5.73□□□□□ -1.49
PDGFRA-205ENST00000507536 A0A1B0GV90 55 aa5.72□□□□□ -1.49
PDGFRA-205ENST00000507536 TMEM223A0PJW6 202 aa5.72□□□□□ -1.49
PDGFRA-205ENST00000507536 NCR3O14931 201 aa5.72□□□□□ -1.49
PDGFRA-205ENST00000507536 LINC00614P0C842 121 aa5.72□□□□□ -1.49
PDGFRA-205ENST00000507536 C14orf144Q96I85 54 aa5.72□□□□□ -1.49
PDGFRA-205ENST00000507536 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
PDGFRA-205ENST00000507536 TRBV10-3A0A0K0K1G6 114 aa5.71□□□□□ -1.5
PDGFRA-205ENST00000507536 ERC2-IT1O76042 136 aa5.71□□□□□ -1.5
PDGFRA-205ENST00000507536 SMIM13P0DJ93 91 aa5.71□□□□□ -1.5
PDGFRA-205ENST00000507536 DDTP30046 118 aa5.71□□□□□ -1.5
PDGFRA-205ENST00000507536 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
PDGFRA-205ENST00000507536 BOD1L2Q8IYS8 172 aa5.71□□□□□ -1.5
PDGFRA-205ENST00000507536 RPS10P5Q9NQ39 176 aa5.71□□□□□ -1.5
PDGFRA-205ENST00000507536 RPS29P62273 56 aaKnown RBP5.7□□□□□ -1.5
PDGFRA-205ENST00000507536 MOBPQ13875 183 aa5.7□□□□□ -1.5
PDGFRA-205ENST00000507536 MIR7-3HGQ8N6C7 128 aa5.7□□□□□ -1.5
PDGFRA-205ENST00000507536 Q9BRP9 147 aa5.69□□□□□ -1.5
PDGFRA-205ENST00000507536 ETDCA0A1B0GVM5 59 aa5.68□□□□□ -1.5
PDGFRA-205ENST00000507536 GAGE2AQ6NT46 116 aa5.68□□□□□ -1.5
PDGFRA-205ENST00000507536 Q8N9P0 234 aaPredicted RBP5.68□□□□□ -1.5
PDGFRA-205ENST00000507536 IGLV9-49A0A0B4J1Y8 123 aa5.67□□□□□ -1.5
PDGFRA-205ENST00000507536 TRAV12-1A0A0B4J245 112 aa5.67□□□□□ -1.5
PDGFRA-205ENST00000507536 PYY3Q5JQD4 70 aa5.67□□□□□ -1.5
PDGFRA-205ENST00000507536 TRAPPC1Q9Y5R8 145 aa5.67□□□□□ -1.5
PDGFRA-205ENST00000507536 HSBP1L1C9JCN9 74 aa5.66□□□□□ -1.5
PDGFRA-205ENST00000507536 PCP4P48539 62 aa5.66□□□□□ -1.5
PDGFRA-205ENST00000507536 TSPEAR-AS2P59090 65 aa5.66□□□□□ -1.5
PDGFRA-205ENST00000507536 MT1HP80294 61 aa5.66□□□□□ -1.5
PDGFRA-205ENST00000507536 LCE1AQ5T7P2 110 aa5.66□□□□□ -1.5
PDGFRA-205ENST00000507536 SSBP3-AS1Q7Z2R9 100 aa5.66□□□□□ -1.5
PDGFRA-205ENST00000507536 FAM19A2Q8N3H0 131 aa5.66□□□□□ -1.5
PDGFRA-205ENST00000507536 LOC107984156A0A0G2JMH3 177 aa5.65□□□□□ -1.5
PDGFRA-205ENST00000507536 SLC25A20O43772 301 aa5.65□□□□□ -1.5
PDGFRA-205ENST00000507536 HERV-K104P63124 156 aa5.65□□□□□ -1.5
PDGFRA-205ENST00000507536 MEIG1Q5JSS6 88 aa5.65□□□□□ -1.5
PDGFRA-205ENST00000507536 Q6ZRX8 168 aa5.65□□□□□ -1.5
PDGFRA-205ENST00000507536 ARL17AQ8IVW1 177 aa5.65□□□□□ -1.5
PDGFRA-205ENST00000507536 IFI27L1Q96BM0 104 aa5.65□□□□□ -1.5
PDGFRA-205ENST00000507536 NDUFA12Q9UI09 145 aa5.65□□□□□ -1.5
PDGFRA-205ENST00000507536 M0R143 59 aa5.64□□□□□ -1.51
PDGFRA-205ENST00000507536 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
PDGFRA-205ENST00000507536 TRBV10-2A0A0K0K1G8 114 aa5.63□□□□□ -1.51
PDGFRA-205ENST00000507536 JOSD1Q15040 202 aaPredicted RBP5.63□□□□□ -1.51
PDGFRA-205ENST00000507536 HIST3H2BBQ8N257 126 aa5.63□□□□□ -1.51
PDGFRA-205ENST00000507536 YPEL4Q96NS1 127 aa5.62□□□□□ -1.51
PDGFRA-205ENST00000507536 IGLV6-57P01721 117 aa5.61□□□□□ -1.51
PDGFRA-205ENST00000507536 CHCHD1Q96BP2 118 aaKnown RBP5.61□□□□□ -1.51
PDGFRA-205ENST00000507536 PRO1933Q9H354 126 aa5.61□□□□□ -1.51
PDGFRA-205ENST00000507536 MYMXA0A1B0GTQ4 84 aa5.6□□□□□ -1.51
PDGFRA-205ENST00000507536 DLEU1O43261 78 aa5.6□□□□□ -1.51
PDGFRA-205ENST00000507536 IGKV2-30P06310 120 aa5.6□□□□□ -1.51
PDGFRA-205ENST00000507536 ST20-AS1Q8NBB2 130 aa5.6□□□□□ -1.51
PDGFRA-205ENST00000507536 SPANXB1Q9NS25 103 aaPredicted RBP5.6□□□□□ -1.51
PDGFRA-205ENST00000507536 HIST1H2BKO60814 126 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 HIST1H2BJP06899 126 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 FABP4P15090 132 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 HIST1H2BOP23527 126 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 HIST1H2BBP33778 126 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 HIST1H2BDP58876 126 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 HIST1H2BCP62807 126 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 HIST2H2BEQ16778 126 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 PCOTHQ58A44 107 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 C9orf153Q5TBE3 101 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 SOSTDC1Q6X4U4 206 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 HIST1H2BHQ93079 126 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 HIST1H2BNQ99877 126 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 HIST1H2BMQ99879 126 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 MAP1LC3CQ9BXW4 147 aa5.59□□□□□ -1.51
PDGFRA-205ENST00000507536 LEPROTO15243 131 aa5.58□□□□□ -1.52
PDGFRA-205ENST00000507536 TRAV23DV6A0A075B6W5 121 aa5.57□□□□□ -1.52
PDGFRA-205ENST00000507536 NDUFC2O95298 119 aa5.57□□□□□ -1.52
PDGFRA-205ENST00000507536 KRTAP10-6P60371 365 aaPredicted RBP5.57□□□□□ -1.52
PDGFRA-205ENST00000507536 COA6Q5JTJ3 125 aaKnown RBP5.57□□□□□ -1.52
PDGFRA-205ENST00000507536 HIST1H2BLQ99880 126 aa5.57□□□□□ -1.52
PDGFRA-205ENST00000507536 H0Y8G0 127 aa5.56□□□□□ -1.52
PDGFRA-205ENST00000507536 J3QQQ9 107 aa5.56□□□□□ -1.52
PDGFRA-205ENST00000507536 ZNF73O43830 326 aaPredicted RBP5.56□□□□□ -1.52
PDGFRA-205ENST00000507536 IGLV8-61A0A075B6I0 122 aa5.55□□□□□ -1.52
PDGFRA-205ENST00000507536 C9orf92A6NGG3 77 aa5.55□□□□□ -1.52
PDGFRA-205ENST00000507536 TRGC2P03986 189 aa5.55□□□□□ -1.52
PDGFRA-205ENST00000507536 SPRR1BP22528 89 aa5.55□□□□□ -1.52
PDGFRA-205ENST00000507536 S100A7L2Q5SY68 101 aa5.55□□□□□ -1.52
PDGFRA-205ENST00000507536 ADAMTSL4-AS1Q5T5F5 129 aa5.55□□□□□ -1.52
PDGFRA-205ENST00000507536 SNHG12Q9BXW3 62 aa5.55□□□□□ -1.52
PDGFRA-205ENST00000507536 HSBP1O75506 76 aa5.54□□□□□ -1.52
PDGFRA-205ENST00000507536 CFC1BP0CG36 223 aa5.54□□□□□ -1.52
PDGFRA-205ENST00000507536 PLNP26678 52 aa5.53□□□□□ -1.52
PDGFRA-205ENST00000507536 NMUP48645 174 aa5.53□□□□□ -1.52
PDGFRA-205ENST00000507536 NPC2P61916 151 aa5.53□□□□□ -1.52
PDGFRA-205ENST00000507536 COL5A1-AS1Q5SY13 56 aa5.53□□□□□ -1.52
PDGFRA-205ENST00000507536 PMCHL2Q9BQD1 86 aa5.53□□□□□ -1.52
PDGFRA-205ENST00000507536 MIEN1Q9BRT3 115 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms