RNA–Protein interactions for RNA: ENST00000507458.2

SMN2-207, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-207ENST00000507458 HIST1H2BNQ99877 126 aa3.35□□□□□ -1.87
SMN2-207ENST00000507458 HIST1H2BMQ99879 126 aa3.35□□□□□ -1.87
SMN2-207ENST00000507458 C2orf88Q9BSF0 95 aa3.35□□□□□ -1.87
SMN2-207ENST00000507458 LINC01549A6NIU2 74 aa3.34□□□□□ -1.87
SMN2-207ENST00000507458 PSPHP1O15172 72 aa3.34□□□□□ -1.87
SMN2-207ENST00000507458 AKR1D1P51857 326 aa3.34□□□□□ -1.87
SMN2-207ENST00000507458 SEC11AP67812 179 aa3.34□□□□□ -1.87
SMN2-207ENST00000507458 PCP2Q8IVA1 136 aa3.34□□□□□ -1.87
SMN2-207ENST00000507458 Q8N8P6 123 aa3.34□□□□□ -1.87
SMN2-207ENST00000507458 ORAOV1Q8WV07 137 aa3.34□□□□□ -1.87
SMN2-207ENST00000507458 NXT2Q9NPJ8 142 aaKnown RBP3.34□□□□□ -1.87
SMN2-207ENST00000507458 CYSLTR1Q9Y271 337 aa3.34□□□□□ -1.87
SMN2-207ENST00000507458 TRBV30A0A0K0K1B3 111 aa3.33□□□□□ -1.88
SMN2-207ENST00000507458 LOC105371267A0A1B0GV96 52 aa3.33□□□□□ -1.88
SMN2-207ENST00000507458 NDUFS5O43920 106 aa3.33□□□□□ -1.88
SMN2-207ENST00000507458 C9orf116Q5BN46 136 aaPredicted RBP3.33□□□□□ -1.88
SMN2-207ENST00000507458 FAM19A3Q7Z5A8 133 aa3.33□□□□□ -1.88
SMN2-207ENST00000507458 LOC389332A0A1B0GUA5 103 aa3.32□□□□□ -1.88
SMN2-207ENST00000507458 A0A1W2PNN7 141 aa3.32□□□□□ -1.88
SMN2-207ENST00000507458 IGIPA6NJ69 53 aa3.32□□□□□ -1.88
SMN2-207ENST00000507458 UBE2D1P51668 147 aa3.32□□□□□ -1.88
SMN2-207ENST00000507458 HERVK_113P63121 156 aa3.32□□□□□ -1.88
SMN2-207ENST00000507458 PDZD11Q5EBL8 140 aa3.32□□□□□ -1.88
SMN2-207ENST00000507458 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
SMN2-207ENST00000507458 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
SMN2-207ENST00000507458 PACRGQ96M98 296 aaPredicted RBP3.32□□□□□ -1.88
SMN2-207ENST00000507458 AMELXQ99217 191 aa3.32□□□□□ -1.88
SMN2-207ENST00000507458 IGLV1-50A0A075B6I6 118 aa3.31□□□□□ -1.88
SMN2-207ENST00000507458 IGHV6-1A0A0B4J1U7 121 aa3.31□□□□□ -1.88
SMN2-207ENST00000507458 A0A0U1RQV1 116 aa3.31□□□□□ -1.88
SMN2-207ENST00000507458 FABP4P15090 132 aa3.31□□□□□ -1.88
SMN2-207ENST00000507458 UNQ6190/PRO20217Q6UXQ8 127 aa3.31□□□□□ -1.88
SMN2-207ENST00000507458 FA2HQ7L5A8 372 aa3.31□□□□□ -1.88
SMN2-207ENST00000507458 Q8IZM0 81 aa3.31□□□□□ -1.88
SMN2-207ENST00000507458 HIST3H2BBQ8N257 126 aa3.31□□□□□ -1.88
SMN2-207ENST00000507458 C18orf32Q8TCD1 76 aa3.31□□□□□ -1.88
SMN2-207ENST00000507458 C6orf48Q9UBA6 75 aa3.31□□□□□ -1.88
SMN2-207ENST00000507458 PSORS1C2Q9UIG4 136 aa3.31□□□□□ -1.88
SMN2-207ENST00000507458 FSIP2Q5CZC0 6907 aa3.3□□□□□ -1.88
SMN2-207ENST00000507458 LINC00614P0C842 121 aa3.3□□□□□ -1.88
SMN2-207ENST00000507458 CKS1BP61024 79 aa3.3□□□□□ -1.88
SMN2-207ENST00000507458 PMVKQ15126 192 aa3.3□□□□□ -1.88
SMN2-207ENST00000507458 C1orf137Q5JT78 98 aa3.3□□□□□ -1.88
SMN2-207ENST00000507458 LINC00337Q8N6G1 96 aa3.3□□□□□ -1.88
SMN2-207ENST00000507458 DIRC1Q969H9 104 aa3.3□□□□□ -1.88
SMN2-207ENST00000507458 TOMM6Q96B49 74 aa3.3□□□□□ -1.88
SMN2-207ENST00000507458 CHCHD1Q96BP2 118 aaKnown RBP3.3□□□□□ -1.88
SMN2-207ENST00000507458 LINC01546A6NGU7 62 aa3.29□□□□□ -1.88
SMN2-207ENST00000507458 F8VRH5 84 aa3.29□□□□□ -1.88
SMN2-207ENST00000507458 NUPR1O60356 82 aa3.29□□□□□ -1.88
SMN2-207ENST00000507458 IGLV7-43P04211 117 aa3.29□□□□□ -1.88
SMN2-207ENST00000507458 PSMB2P49721 201 aa3.29□□□□□ -1.88
SMN2-207ENST00000507458 PHF5AQ7RTV0 110 aaKnown RBP3.29□□□□□ -1.88
SMN2-207ENST00000507458 HIST1H2BLQ99880 126 aa3.29□□□□□ -1.88
SMN2-207ENST00000507458 LPAP08519 4548 aa3.29□□□□□ -1.88
SMN2-207ENST00000507458 TINCRA0A1B0GVN0 87 aa3.28□□□□□ -1.88
SMN2-207ENST00000507458 C2orf82Q6UX34 121 aa3.28□□□□□ -1.88
SMN2-207ENST00000507458 FAM19A5Q7Z5A7 132 aaPredicted RBP3.28□□□□□ -1.88
SMN2-207ENST00000507458 FAM19A2Q8N3H0 131 aa3.28□□□□□ -1.88
SMN2-207ENST00000507458 SCGB3A1Q96QR1 104 aa3.28□□□□□ -1.88
SMN2-207ENST00000507458 CDKN2A-AS1Q9UH64 79 aa3.28□□□□□ -1.88
SMN2-207ENST00000507458 PRO0628Q9UI54 55 aa3.28□□□□□ -1.88
SMN2-207ENST00000507458 A0A096LNJ9 63 aa3.27□□□□□ -1.89
SMN2-207ENST00000507458 LEPROTL1O95214 131 aa3.27□□□□□ -1.89
SMN2-207ENST00000507458 KRTDAPP60985 99 aa3.27□□□□□ -1.89
SMN2-207ENST00000507458 UBE2BP63146 152 aa3.27□□□□□ -1.89
SMN2-207ENST00000507458 S100A12P80511 92 aa3.27□□□□□ -1.89
SMN2-207ENST00000507458 C8orf17Q9NRJ1 99 aa3.27□□□□□ -1.89
SMN2-207ENST00000507458 TOMM7Q9P0U1 55 aa3.27□□□□□ -1.89
SMN2-207ENST00000507458 TP73-AS1Q9UF72 201 aa3.27□□□□□ -1.89
SMN2-207ENST00000507458 HSPB8Q9UJY1 196 aa3.27□□□□□ -1.89
SMN2-207ENST00000507458 C20orf202A1L168 122 aa3.26□□□□□ -1.89
SMN2-207ENST00000507458 H3BRM9 83 aa3.26□□□□□ -1.89
SMN2-207ENST00000507458 SMIM6P0DI80 62 aa3.26□□□□□ -1.89
SMN2-207ENST00000507458 JOSD1Q15040 202 aaPredicted RBP3.26□□□□□ -1.89
SMN2-207ENST00000507458 PMCHL1Q16048 86 aa3.26□□□□□ -1.89
SMN2-207ENST00000507458 SFTA2Q6UW10 78 aa3.26□□□□□ -1.89
SMN2-207ENST00000507458 C12orf57Q99622 126 aa3.26□□□□□ -1.89
SMN2-207ENST00000507458 CST9LQ9H4G1 147 aa3.26□□□□□ -1.89
SMN2-207ENST00000507458 BPY2O14599 106 aa3.25□□□□□ -1.89
SMN2-207ENST00000507458 HBDP02042 147 aa3.25□□□□□ -1.89
SMN2-207ENST00000507458 COX7B2Q8TF08 81 aa3.25□□□□□ -1.89
SMN2-207ENST00000507458 RBM12B-AS1Q9P1G2 102 aa3.25□□□□□ -1.89
SMN2-207ENST00000507458 C22orf24Q9Y442 160 aa3.25□□□□□ -1.89
SMN2-207ENST00000507458 C3orf79P0CE67 100 aa3.24□□□□□ -1.89
SMN2-207ENST00000507458 IGLC3P0DOY3 106 aa3.24□□□□□ -1.89
SMN2-207ENST00000507458 RPL28P46779 137 aaKnown RBP3.24□□□□□ -1.89
SMN2-207ENST00000507458 COX17Q14061 63 aa3.24□□□□□ -1.89
SMN2-207ENST00000507458 PYY3Q5JQD4 70 aa3.24□□□□□ -1.89
SMN2-207ENST00000507458 IFI27L1Q96BM0 104 aa3.24□□□□□ -1.89
SMN2-207ENST00000507458 TMEM223A0PJW6 202 aa3.23□□□□□ -1.89
SMN2-207ENST00000507458 SYS1-DBNDD2H3BUS1 97 aa3.23□□□□□ -1.89
SMN2-207ENST00000507458 BCE1O60756 84 aa3.23□□□□□ -1.89
SMN2-207ENST00000507458 DEFB116Q30KQ4 102 aa3.23□□□□□ -1.89
SMN2-207ENST00000507458 XAGE1AQ9HD64 81 aa3.23□□□□□ -1.89
SMN2-207ENST00000507458 CRCT1Q9UGL9 99 aa3.23□□□□□ -1.89
SMN2-207ENST00000507458 SPINK8P0C7L1 97 aa3.22□□□□□ -1.89
SMN2-207ENST00000507458 CTAG1AP78358 180 aa3.22□□□□□ -1.89
SMN2-207ENST00000507458 VAMP8Q9BV40 100 aa3.22□□□□□ -1.89
SMN2-207ENST00000507458 TSTD3H0UI37 97 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms