RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 Q8N8P6 123 aa3.69□□□□□ -1.82
NR1I3-224ENST00000507215 NXT2Q9NPJ8 142 aaKnown RBP3.69□□□□□ -1.82
NR1I3-224ENST00000507215 V9GYY9 64 aa3.69□□□□□ -1.82
NR1I3-224ENST00000507215 M0R2T5 61 aa3.68□□□□□ -1.82
NR1I3-224ENST00000507215 NAT8Q9UHE5 227 aa3.68□□□□□ -1.82
NR1I3-224ENST00000507215 SNAPINO95295 136 aa3.67□□□□□ -1.82
NR1I3-224ENST00000507215 RAB5BP61020 215 aa3.67□□□□□ -1.82
NR1I3-224ENST00000507215 RPL23P62829 140 aaKnown RBP3.67□□□□□ -1.82
NR1I3-224ENST00000507215 ADIRFQ15847 76 aa3.67□□□□□ -1.82
NR1I3-224ENST00000507215 KRTAP19-2Q3LHN2 52 aa3.67□□□□□ -1.82
NR1I3-224ENST00000507215 LINC00483Q53H64 154 aa3.67□□□□□ -1.82
NR1I3-224ENST00000507215 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
NR1I3-224ENST00000507215 MRPL54Q6P161 138 aaKnown RBP3.67□□□□□ -1.82
NR1I3-224ENST00000507215 TCTE3Q8IZS6 198 aa3.67□□□□□ -1.82
NR1I3-224ENST00000507215 LINC00518Q8N0U6 118 aa3.67□□□□□ -1.82
NR1I3-224ENST00000507215 IGLV8-61A0A075B6I0 122 aa3.66□□□□□ -1.82
NR1I3-224ENST00000507215 LOC389332A0A1B0GUA5 103 aa3.66□□□□□ -1.82
NR1I3-224ENST00000507215 SRP19P09132 144 aaKnown RBP3.66□□□□□ -1.82
NR1I3-224ENST00000507215 ALKAL2Q6UX46 152 aa3.66□□□□□ -1.82
NR1I3-224ENST00000507215 SND1-IT1Q9HBX3 110 aa3.66□□□□□ -1.82
NR1I3-224ENST00000507215 PFN2P35080 140 aa3.65□□□□□ -1.83
NR1I3-224ENST00000507215 TOMM6Q96B49 74 aa3.65□□□□□ -1.83
NR1I3-224ENST00000507215 ERG28Q9UKR5 140 aa3.65□□□□□ -1.83
NR1I3-224ENST00000507215 SCGB3A1Q96QR1 104 aa3.64□□□□□ -1.83
NR1I3-224ENST00000507215 LIMD2Q9BT23 127 aa3.64□□□□□ -1.83
NR1I3-224ENST00000507215 ETDCA0A1B0GVM5 59 aa3.63□□□□□ -1.83
NR1I3-224ENST00000507215 SCO1O75880 301 aa3.63□□□□□ -1.83
NR1I3-224ENST00000507215 SPRR1AP35321 89 aa3.63□□□□□ -1.83
NR1I3-224ENST00000507215 MOBPQ13875 183 aa3.63□□□□□ -1.83
NR1I3-224ENST00000507215 PCOTHQ58A44 107 aa3.63□□□□□ -1.83
NR1I3-224ENST00000507215 COX6B2Q6YFQ2 88 aa3.63□□□□□ -1.83
NR1I3-224ENST00000507215 FA2HQ7L5A8 372 aa3.63□□□□□ -1.83
NR1I3-224ENST00000507215 KCNQ1DNQ9H478 68 aa3.63□□□□□ -1.83
NR1I3-224ENST00000507215 DHRS4-AS1Q9P1J3 65 aa3.63□□□□□ -1.83
NR1I3-224ENST00000507215 SPINK8P0C7L1 97 aa3.62□□□□□ -1.83
NR1I3-224ENST00000507215 PEA15Q15121 130 aa3.62□□□□□ -1.83
NR1I3-224ENST00000507215 PMVKQ15126 192 aa3.62□□□□□ -1.83
NR1I3-224ENST00000507215 SMCR5Q8TEV8 140 aa3.62□□□□□ -1.83
NR1I3-224ENST00000507215 CST9LQ9H4G1 147 aa3.62□□□□□ -1.83
NR1I3-224ENST00000507215 TRAV9-1A0A075B6T8 112 aa3.61□□□□□ -1.83
NR1I3-224ENST00000507215 LINC00587B1AMM8 73 aa3.61□□□□□ -1.83
NR1I3-224ENST00000507215 JOSD1Q15040 202 aaPredicted RBP3.6□□□□□ -1.83
NR1I3-224ENST00000507215 TAL2Q16559 108 aa3.6□□□□□ -1.83
NR1I3-224ENST00000507215 SLC25A34Q6PIV7 304 aa3.6□□□□□ -1.83
NR1I3-224ENST00000507215 KRTAP4-16G5E9R7 235 aaPredicted RBP3.59□□□□□ -1.83
NR1I3-224ENST00000507215 IGLC3P0DOY3 106 aa3.59□□□□□ -1.83
NR1I3-224ENST00000507215 LINC00158P58513 81 aa3.59□□□□□ -1.83
NR1I3-224ENST00000507215 Q1RN00 199 aa3.59□□□□□ -1.83
NR1I3-224ENST00000507215 C9orf153Q5TBE3 101 aa3.59□□□□□ -1.83
NR1I3-224ENST00000507215 LINC01546A6NGU7 62 aa3.58□□□□□ -1.84
NR1I3-224ENST00000507215 MT-ND4LP03901 98 aa3.58□□□□□ -1.84
NR1I3-224ENST00000507215 FLGP20930 4061 aaPredicted RBP3.57□□□□□ -1.84
NR1I3-224ENST00000507215 IGLV6-57P01721 117 aa3.57□□□□□ -1.84
NR1I3-224ENST00000507215 ADCYAP1P18509 176 aa3.57□□□□□ -1.84
NR1I3-224ENST00000507215 Q6ZRX8 168 aa3.57□□□□□ -1.84
NR1I3-224ENST00000507215 COMMD7Q86VX2 200 aa3.57□□□□□ -1.84
NR1I3-224ENST00000507215 ZNF625Q96I27 306 aaPredicted RBP3.57□□□□□ -1.84
NR1I3-224ENST00000507215 TRBV10-2A0A0K0K1G8 114 aa3.56□□□□□ -1.84
NR1I3-224ENST00000507215 ZNF22P17026 224 aaPredicted RBP3.56□□□□□ -1.84
NR1I3-224ENST00000507215 CD164Q04900 197 aa3.56□□□□□ -1.84
NR1I3-224ENST00000507215 CLLU1Q5K131 121 aa3.56□□□□□ -1.84
NR1I3-224ENST00000507215 Q8NDZ9 215 aa3.56□□□□□ -1.84
NR1I3-224ENST00000507215 SMCO4Q9NRQ5 59 aa3.56□□□□□ -1.84
NR1I3-224ENST00000507215 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
NR1I3-224ENST00000507215 A0A1B0GV72 72 aa3.55□□□□□ -1.84
NR1I3-224ENST00000507215 A8MU10 97 aa3.55□□□□□ -1.84
NR1I3-224ENST00000507215 C9JQL5 133 aa3.55□□□□□ -1.84
NR1I3-224ENST00000507215 RPL37P61927 97 aaKnown RBP3.55□□□□□ -1.84
NR1I3-224ENST00000507215 Q5XG85 94 aa3.55□□□□□ -1.84
NR1I3-224ENST00000507215 LINC00846Q9NV44 126 aa3.55□□□□□ -1.84
NR1I3-224ENST00000507215 TRBV10-3A0A0K0K1G6 114 aa3.54□□□□□ -1.84
NR1I3-224ENST00000507215 C9orf92A6NGG3 77 aa3.54□□□□□ -1.84
NR1I3-224ENST00000507215 NCR3O14931 201 aa3.54□□□□□ -1.84
NR1I3-224ENST00000507215 HINT1P49773 126 aaPredicted RBP3.54□□□□□ -1.84
NR1I3-224ENST00000507215 USH2AO75445 5202 aa3.54□□□□□ -1.84
NR1I3-224ENST00000507215 ERC2-IT1O76042 136 aa3.53□□□□□ -1.84
NR1I3-224ENST00000507215 DDTP30046 118 aa3.53□□□□□ -1.84
NR1I3-224ENST00000507215 NDUFA6P56556 154 aa3.53□□□□□ -1.84
NR1I3-224ENST00000507215 MEIG1Q5JSS6 88 aa3.53□□□□□ -1.84
NR1I3-224ENST00000507215 TMEM170BQ5T4T1 132 aa3.53□□□□□ -1.84
NR1I3-224ENST00000507215 C12orf57Q99622 126 aa3.53□□□□□ -1.84
NR1I3-224ENST00000507215 Q9BRP9 147 aa3.53□□□□□ -1.84
NR1I3-224ENST00000507215 LOC107984156A0A0G2JMH3 177 aa3.52□□□□□ -1.85
NR1I3-224ENST00000507215 SPRR1BP22528 89 aa3.52□□□□□ -1.85
NR1I3-224ENST00000507215 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
NR1I3-224ENST00000507215 ARL17AQ8IVW1 177 aa3.52□□□□□ -1.85
NR1I3-224ENST00000507215 MIR7-3HGQ8N6C7 128 aa3.52□□□□□ -1.85
NR1I3-224ENST00000507215 SPANXB1Q9NS25 103 aaPredicted RBP3.52□□□□□ -1.85
NR1I3-224ENST00000507215 LAMTOR3Q9UHA4 124 aa3.52□□□□□ -1.85
NR1I3-224ENST00000507215 FCGBPQ9Y6R7 5405 aaPredicted RBP3.52□□□□□ -1.85
NR1I3-224ENST00000507215 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
NR1I3-224ENST00000507215 C11orf86A6NJI1 115 aa3.51□□□□□ -1.85
NR1I3-224ENST00000507215 SMIM13P0DJ93 91 aa3.51□□□□□ -1.85
NR1I3-224ENST00000507215 S100A7L2Q5SY68 101 aa3.51□□□□□ -1.85
NR1I3-224ENST00000507215 MIEN1Q9BRT3 115 aa3.51□□□□□ -1.85
NR1I3-224ENST00000507215 TRAV23DV6A0A075B6W5 121 aa3.5□□□□□ -1.85
NR1I3-224ENST00000507215 MYMXA0A1B0GTQ4 84 aa3.5□□□□□ -1.85
NR1I3-224ENST00000507215 H7C2G1 150 aa3.5□□□□□ -1.85
NR1I3-224ENST00000507215 NDUFC2O95298 119 aa3.5□□□□□ -1.85
NR1I3-224ENST00000507215 HBDP02042 147 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms