RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 GOLGA4Q13439 2230 aaKnown RBP-0.03□□□□□ -2.41
GYPB-207ENST00000506679 DMDP11532 3685 aa-0.03□□□□□ -2.41
GYPB-207ENST00000506679 COL14A1Q05707 1796 aaKnown RBP-0.04□□□□□ -2.42
GYPB-207ENST00000506679 SEC11AP67812 179 aa-0.04□□□□□ -2.42
GYPB-207ENST00000506679 KRTAP20-2Q3LI61 65 aa-0.04□□□□□ -2.42
GYPB-207ENST00000506679 VAMP8Q9BV40 100 aa-0.04□□□□□ -2.42
GYPB-207ENST00000506679 DNAH3Q8TD57 4116 aa-0.04□□□□□ -2.42
GYPB-207ENST00000506679 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.04□□□□□ -2.42
GYPB-207ENST00000506679 COL4A6Q14031 1691 aa-0.05□□□□□ -2.42
GYPB-207ENST00000506679 KIAA0556O60303 1618 aa-0.05□□□□□ -2.42
GYPB-207ENST00000506679 SMARCA2P51531 1590 aa-0.05□□□□□ -2.42
GYPB-207ENST00000506679 LINC00959A0A1B0GUT2 108 aa-0.05□□□□□ -2.42
GYPB-207ENST00000506679 hADV29S1A0JD25 119 aa-0.05□□□□□ -2.42
GYPB-207ENST00000506679 TMEM218A2RU14 115 aa-0.05□□□□□ -2.42
GYPB-207ENST00000506679 SPINK4O60575 86 aa-0.05□□□□□ -2.42
GYPB-207ENST00000506679 SPRR1BP22528 89 aa-0.05□□□□□ -2.42
GYPB-207ENST00000506679 SFTA2Q6UW10 78 aa-0.05□□□□□ -2.42
GYPB-207ENST00000506679 USMG5Q96IX5 58 aa-0.05□□□□□ -2.42
GYPB-207ENST00000506679 CCDC141Q6ZP82 1450 aa-0.05□□□□□ -2.42
GYPB-207ENST00000506679 DNAH6Q9C0G6 4158 aa-0.05□□□□□ -2.42
GYPB-207ENST00000506679 SPTBN1Q01082 2364 aaKnown RBP-0.05□□□□□ -2.42
GYPB-207ENST00000506679 K7EQZ3 153 aa-0.06□□□□□ -2.42
GYPB-207ENST00000506679 COX8AP10176 69 aa-0.06□□□□□ -2.42
GYPB-207ENST00000506679 KRTAP19-7Q3SYF9 63 aa-0.06□□□□□ -2.42
GYPB-207ENST00000506679 AP4S1Q9Y587 144 aa-0.06□□□□□ -2.42
GYPB-207ENST00000506679 ABCC5O15440 1437 aa-0.06□□□□□ -2.42
GYPB-207ENST00000506679 DNAH10Q8IVF4 4471 aa-0.06□□□□□ -2.42
GYPB-207ENST00000506679 PRDM15P57071 1507 aaPredicted RBP-0.07□□□□□ -2.42
GYPB-207ENST00000506679 SHPRHQ149N8 1683 aa-0.07□□□□□ -2.42
GYPB-207ENST00000506679 MAGI2Q86UL8 1455 aa-0.07□□□□□ -2.42
GYPB-207ENST00000506679 PLEKHH2Q8IVE3 1493 aa-0.07□□□□□ -2.42
GYPB-207ENST00000506679 MLH3Q9UHC1 1453 aa-0.07□□□□□ -2.42
GYPB-207ENST00000506679 TRAV30A0A087WSZ9 112 aa-0.07□□□□□ -2.42
GYPB-207ENST00000506679 H3BQF6 201 aa-0.07□□□□□ -2.42
GYPB-207ENST00000506679 MPC2O95563 127 aa-0.07□□□□□ -2.42
GYPB-207ENST00000506679 PMCHL1Q16048 86 aa-0.07□□□□□ -2.42
GYPB-207ENST00000506679 C14orf144Q96I85 54 aa-0.07□□□□□ -2.42
GYPB-207ENST00000506679 CACFD1Q9UGQ2 172 aa-0.07□□□□□ -2.42
GYPB-207ENST00000506679 ABCC2Q92887 1545 aa-0.08□□□□□ -2.42
GYPB-207ENST00000506679 FYCO1Q9BQS8 1478 aa-0.08□□□□□ -2.42
GYPB-207ENST00000506679 PAPPA2Q9BXP8 1791 aa-0.08□□□□□ -2.42
GYPB-207ENST00000506679 ANKRD36A6QL64 1941 aa-0.08□□□□□ -2.42
GYPB-207ENST00000506679 TRBV25-1A0A075B6N4 114 aa-0.08□□□□□ -2.42
GYPB-207ENST00000506679 C7orf77A4D0Y5 90 aa-0.08□□□□□ -2.42
GYPB-207ENST00000506679 SYS1-DBNDD2H3BUS1 97 aa-0.08□□□□□ -2.42
GYPB-207ENST00000506679 GNGT2O14610 69 aa-0.08□□□□□ -2.42
GYPB-207ENST00000506679 LINC00032P0C843 101 aa-0.08□□□□□ -2.42
GYPB-207ENST00000506679 SPRR2FQ96RM1 72 aa-0.08□□□□□ -2.42
GYPB-207ENST00000506679 KIAA1551Q9HCM1 1747 aa-0.08□□□□□ -2.42
GYPB-207ENST00000506679 TARBP1Q13395 1621 aaKnown RBP-0.09□□□□□ -2.42
GYPB-207ENST00000506679 NLRP1Q9C000 1473 aa-0.09□□□□□ -2.42
GYPB-207ENST00000506679 LRRC37AA6NMS7 1700 aa-0.09□□□□□ -2.42
GYPB-207ENST00000506679 EDC4Q6P2E9 1401 aaKnown RBP-0.09□□□□□ -2.42
GYPB-207ENST00000506679 LCE6AA0A183 80 aa-0.09□□□□□ -2.42
GYPB-207ENST00000506679 ATOX1O00244 68 aa-0.09□□□□□ -2.42
GYPB-207ENST00000506679 PRM1P04553 51 aa-0.09□□□□□ -2.42
GYPB-207ENST00000506679 RBP2P50120 134 aa-0.09□□□□□ -2.42
GYPB-207ENST00000506679 KRTAP19-8Q3LI54 63 aa-0.09□□□□□ -2.42
GYPB-207ENST00000506679 PSMG4Q5JS54 123 aa-0.09□□□□□ -2.42
GYPB-207ENST00000506679 ACBD7Q8N6N7 88 aa-0.09□□□□□ -2.42
GYPB-207ENST00000506679 LCN9Q8WX39 176 aa-0.09□□□□□ -2.42
GYPB-207ENST00000506679 TEX14Q8IWB6 1497 aa-0.1□□□□□ -2.42
GYPB-207ENST00000506679 RAPGEF2Q9Y4G8 1499 aa-0.1□□□□□ -2.42
GYPB-207ENST00000506679 KNDC1Q76NI1 1749 aa-0.1□□□□□ -2.42
GYPB-207ENST00000506679 FMN2Q9NZ56 1722 aa-0.1□□□□□ -2.42
GYPB-207ENST00000506679 DNAH17Q9UFH2 4485 aa-0.1□□□□□ -2.42
GYPB-207ENST00000506679 A0A087WVE0 104 aa-0.1□□□□□ -2.43
GYPB-207ENST00000506679 A0A0G2JND7 137 aa-0.1□□□□□ -2.43
GYPB-207ENST00000506679 A0A1B0GU69 56 aa-0.1□□□□□ -2.43
GYPB-207ENST00000506679 UQCRHP07919 91 aa-0.1□□□□□ -2.43
GYPB-207ENST00000506679 S100A10P60903 97 aa-0.1□□□□□ -2.43
GYPB-207ENST00000506679 SERP2Q8N6R1 65 aa-0.1□□□□□ -2.43
GYPB-207ENST00000506679 DEFB105AQ8NG35 78 aa-0.1□□□□□ -2.43
GYPB-207ENST00000506679 TRGV9Q99603 122 aa-0.1□□□□□ -2.43
GYPB-207ENST00000506679 PMCHL2Q9BQD1 86 aa-0.1□□□□□ -2.43
GYPB-207ENST00000506679 FXYD6Q9H0Q3 95 aa-0.1□□□□□ -2.43
GYPB-207ENST00000506679 KIAA0586Q9BVV6 1533 aa-0.1□□□□□ -2.43
GYPB-207ENST00000506679 MARF1Q9Y4F3 1742 aaKnown RBP-0.1□□□□□ -2.43
GYPB-207ENST00000506679 DNAH11Q96DT5 4516 aa-0.1□□□□□ -2.43
GYPB-207ENST00000506679 CLTCQ00610 1675 aaKnown RBP-0.11□□□□□ -2.43
GYPB-207ENST00000506679 CNTLNQ9NXG0 1405 aa-0.11□□□□□ -2.43
GYPB-207ENST00000506679 LOC730098B7Z3J9 87 aa-0.11□□□□□ -2.43
GYPB-207ENST00000506679 H0Y9P7 68 aa-0.11□□□□□ -2.43
GYPB-207ENST00000506679 H7BZZ5 65 aa-0.11□□□□□ -2.43
GYPB-207ENST00000506679 HMGN3Q15651 99 aa-0.11□□□□□ -2.43
GYPB-207ENST00000506679 C6orf201Q7Z4U5 140 aa-0.11□□□□□ -2.43
GYPB-207ENST00000506679 DPY30Q9C005 99 aa-0.11□□□□□ -2.43
GYPB-207ENST00000506679 MON2Q7Z3U7 1717 aa-0.11□□□□□ -2.43
GYPB-207ENST00000506679 ANKRD36BQ8N2N9 1353 aa-0.11□□□□□ -2.43
GYPB-207ENST00000506679 C5P01031 1676 aa-0.11□□□□□ -2.43
GYPB-207ENST00000506679 DNAH2Q9P225 4427 aa-0.12□□□□□ -2.43
GYPB-207ENST00000506679 TJP1Q07157 1748 aa-0.12□□□□□ -2.43
GYPB-207ENST00000506679 KIF20BQ96Q89 1820 aa-0.12□□□□□ -2.43
GYPB-207ENST00000506679 ATP6V1G2-DDX39BF2Z307 99 aa-0.12□□□□□ -2.43
GYPB-207ENST00000506679 MT-ATP8P03928 68 aa-0.12□□□□□ -2.43
GYPB-207ENST00000506679 ARMS2P0C7Q2 107 aa-0.12□□□□□ -2.43
GYPB-207ENST00000506679 GNGT1P63211 74 aa-0.12□□□□□ -2.43
GYPB-207ENST00000506679 KLK9Q2XQG4 91 aa-0.12□□□□□ -2.43
GYPB-207ENST00000506679 ALKAL2Q6UX46 152 aa-0.12□□□□□ -2.43
GYPB-207ENST00000506679 PRO3102Q9H379 93 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms