RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 A0A096LNJ9 63 aa3.78□□□□□ -1.8
SMAD5-201ENST00000506223 C11orf86A6NJI1 115 aa3.78□□□□□ -1.8
SMAD5-201ENST00000506223 FAM19A1Q7Z5A9 133 aa3.78□□□□□ -1.8
SMAD5-201ENST00000506223 SND1-IT1Q9HBX3 110 aa3.78□□□□□ -1.8
SMAD5-201ENST00000506223 TRAV12-1A0A0B4J245 112 aa3.77□□□□□ -1.81
SMAD5-201ENST00000506223 LINC00587B1AMM8 73 aa3.77□□□□□ -1.81
SMAD5-201ENST00000506223 LEPROTL1O95214 131 aa3.77□□□□□ -1.81
SMAD5-201ENST00000506223 CRYGAP11844 174 aa3.77□□□□□ -1.81
SMAD5-201ENST00000506223 HERVK_113P61574 105 aa3.77□□□□□ -1.81
SMAD5-201ENST00000506223 PRR4Q16378 134 aa3.77□□□□□ -1.81
SMAD5-201ENST00000506223 CBLN2Q8IUK8 224 aa3.77□□□□□ -1.81
SMAD5-201ENST00000506223 FAM19A2Q8N3H0 131 aa3.77□□□□□ -1.81
SMAD5-201ENST00000506223 MIEN1Q9BRT3 115 aa3.77□□□□□ -1.81
SMAD5-201ENST00000506223 MAP1LC3CQ9BXW4 147 aa3.77□□□□□ -1.81
SMAD5-201ENST00000506223 IGKV2D-26A0A0A0MRZ7 120 aa3.76□□□□□ -1.81
SMAD5-201ENST00000506223 A0A1B0GWB2 263 aa3.76□□□□□ -1.81
SMAD5-201ENST00000506223 SCO1O75880 301 aa3.76□□□□□ -1.81
SMAD5-201ENST00000506223 TRGC2P03986 189 aa3.76□□□□□ -1.81
SMAD5-201ENST00000506223 PRLHP81277 87 aa3.76□□□□□ -1.81
SMAD5-201ENST00000506223 SLC7A5P1Q8MH63 180 aa3.76□□□□□ -1.81
SMAD5-201ENST00000506223 HSPB8Q9UJY1 196 aa3.76□□□□□ -1.81
SMAD5-201ENST00000506223 MYMXA0A1B0GTQ4 84 aa3.75□□□□□ -1.81
SMAD5-201ENST00000506223 TMEM223A0PJW6 202 aa3.75□□□□□ -1.81
SMAD5-201ENST00000506223 TSPAN13O95857 204 aa3.75□□□□□ -1.81
SMAD5-201ENST00000506223 FABP4P15090 132 aa3.75□□□□□ -1.81
SMAD5-201ENST00000506223 PLNP26678 52 aa3.75□□□□□ -1.81
SMAD5-201ENST00000506223 CXCL6P80162 114 aa3.75□□□□□ -1.81
SMAD5-201ENST00000506223 BOD1L2Q8IYS8 172 aa3.75□□□□□ -1.81
SMAD5-201ENST00000506223 HIGD2AQ9BW72 106 aa3.75□□□□□ -1.81
SMAD5-201ENST00000506223 TMEM126AQ9H061 195 aa3.75□□□□□ -1.81
SMAD5-201ENST00000506223 NDUFA12Q9UI09 145 aa3.75□□□□□ -1.81
SMAD5-201ENST00000506223 TMEM238C9JI98 176 aa3.74□□□□□ -1.81
SMAD5-201ENST00000506223 NCR3O14931 201 aa3.74□□□□□ -1.81
SMAD5-201ENST00000506223 SERF1AO75920 110 aa3.74□□□□□ -1.81
SMAD5-201ENST00000506223 KRTAP1-4P0C5Y4 121 aa3.74□□□□□ -1.81
SMAD5-201ENST00000506223 SMIM13P0DJ93 91 aa3.74□□□□□ -1.81
SMAD5-201ENST00000506223 LGALS3P17931 250 aaKnown RBP3.74□□□□□ -1.81
SMAD5-201ENST00000506223 ETDCA0A1B0GVM5 59 aa3.73□□□□□ -1.81
SMAD5-201ENST00000506223 M0R378 163 aa3.73□□□□□ -1.81
SMAD5-201ENST00000506223 DPM2O94777 84 aa3.73□□□□□ -1.81
SMAD5-201ENST00000506223 MIR7-3HGQ8N6C7 128 aa3.73□□□□□ -1.81
SMAD5-201ENST00000506223 PLEKHB2Q96CS7 222 aa3.73□□□□□ -1.81
SMAD5-201ENST00000506223 ZNF706Q9Y5V0 76 aaPredicted RBP3.73□□□□□ -1.81
SMAD5-201ENST00000506223 LEPROTO15243 131 aa3.72□□□□□ -1.81
SMAD5-201ENST00000506223 IGKCP01834 107 aa3.72□□□□□ -1.81
SMAD5-201ENST00000506223 KRTAP10-6P60371 365 aaPredicted RBP3.72□□□□□ -1.81
SMAD5-201ENST00000506223 S100A7L2Q5SY68 101 aa3.72□□□□□ -1.81
SMAD5-201ENST00000506223 YPEL4Q96NS1 127 aa3.72□□□□□ -1.81
SMAD5-201ENST00000506223 ANAPC11Q9NYG5 84 aa3.72□□□□□ -1.81
SMAD5-201ENST00000506223 MUC17Q685J3 4493 aa3.71□□□□□ -1.82
SMAD5-201ENST00000506223 J3QQQ9 107 aa3.71□□□□□ -1.82
SMAD5-201ENST00000506223 NMUP48645 174 aa3.71□□□□□ -1.82
SMAD5-201ENST00000506223 FAM229BQ4G0N7 80 aa3.71□□□□□ -1.82
SMAD5-201ENST00000506223 LINC00304Q8N9R0 145 aa3.71□□□□□ -1.82
SMAD5-201ENST00000506223 PMCHL2Q9BQD1 86 aa3.71□□□□□ -1.82
SMAD5-201ENST00000506223 DAND5Q8N907 189 aa3.7□□□□□ -1.82
SMAD5-201ENST00000506223 TRBV10-3A0A0K0K1G6 114 aa3.69□□□□□ -1.82
SMAD5-201ENST00000506223 DDTP30046 118 aa3.69□□□□□ -1.82
SMAD5-201ENST00000506223 HINT1P49773 126 aaPredicted RBP3.69□□□□□ -1.82
SMAD5-201ENST00000506223 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
SMAD5-201ENST00000506223 NPC2P61916 151 aa3.69□□□□□ -1.82
SMAD5-201ENST00000506223 KRTAP13-1Q8IUC0 172 aa3.69□□□□□ -1.82
SMAD5-201ENST00000506223 CBY1Q9Y3M2 126 aa3.69□□□□□ -1.82
SMAD5-201ENST00000506223 JOSD1Q15040 202 aaPredicted RBP3.68□□□□□ -1.82
SMAD5-201ENST00000506223 LINC00337Q8N6G1 96 aa3.68□□□□□ -1.82
SMAD5-201ENST00000506223 Q8NDZ9 215 aa3.68□□□□□ -1.82
SMAD5-201ENST00000506223 SPANXB1Q9NS25 103 aaPredicted RBP3.68□□□□□ -1.82
SMAD5-201ENST00000506223 IGLV8-61A0A075B6I0 122 aa3.67□□□□□ -1.82
SMAD5-201ENST00000506223 C20orf202A1L168 122 aa3.67□□□□□ -1.82
SMAD5-201ENST00000506223 COLCA2A8K830 154 aa3.67□□□□□ -1.82
SMAD5-201ENST00000506223 TSPEAR-AS2P59090 65 aa3.67□□□□□ -1.82
SMAD5-201ENST00000506223 SPAG11AQ6PDA7 123 aa3.67□□□□□ -1.82
SMAD5-201ENST00000506223 OR13C6PQ8NH95 151 aa3.67□□□□□ -1.82
SMAD5-201ENST00000506223 SMCR5Q8TEV8 140 aa3.67□□□□□ -1.82
SMAD5-201ENST00000506223 SPRR4Q96PI1 79 aa3.67□□□□□ -1.82
SMAD5-201ENST00000506223 RETNLBQ9BQ08 111 aa3.67□□□□□ -1.82
SMAD5-201ENST00000506223 KCNQ1DNQ9H478 68 aa3.67□□□□□ -1.82
SMAD5-201ENST00000506223 TRAV23DV6A0A075B6W5 121 aa3.66□□□□□ -1.82
SMAD5-201ENST00000506223 TRBV10-2A0A0K0K1G8 114 aa3.66□□□□□ -1.82
SMAD5-201ENST00000506223 SYS1-DBNDD2H3BUS1 97 aa3.66□□□□□ -1.82
SMAD5-201ENST00000506223 KRTDAPP60985 99 aa3.66□□□□□ -1.82
SMAD5-201ENST00000506223 KRTAP13-2Q52LG2 175 aa3.66□□□□□ -1.82
SMAD5-201ENST00000506223 SCGB1D4Q6XE38 83 aa3.66□□□□□ -1.82
SMAD5-201ENST00000506223 C3orf22Q8N5N4 141 aa3.66□□□□□ -1.82
SMAD5-201ENST00000506223 A0A0J9YXY3 114 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 LOC105371267A0A1B0GV96 52 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 ZNF815PA8K554 130 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 HIST1H2BKO60814 126 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 NDUFC2O95298 119 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 HIST1H2BJP06899 126 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 HIST1H2BOP23527 126 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 HIST1H2BBP33778 126 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 HIST1H2BDP58876 126 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 HIST1H2BCP62807 126 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 HIST2H2BEQ16778 126 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.65□□□□□ -1.83
SMAD5-201ENST00000506223 C9orf153Q5TBE3 101 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 HIST1H2BHQ93079 126 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 HIST1H2BNQ99877 126 aa3.65□□□□□ -1.83
SMAD5-201ENST00000506223 HIST1H2BMQ99879 126 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms