RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 LINC00959A0A1B0GUT2 108 aa2.83□□□□□ -1.96
CHD1-204ENST00000505982 C3orf84H3BNL1 204 aa2.83□□□□□ -1.96
CHD1-204ENST00000505982 ERC2-IT1O76042 136 aa2.83□□□□□ -1.96
CHD1-204ENST00000505982 FUSP35637 526 aaKnown RBP eCLIP2.83□□□□□ -1.96
CHD1-204ENST00000505982 COX17Q14061 63 aa2.83□□□□□ -1.96
CHD1-204ENST00000505982 DEFB136Q30KP8 78 aa2.83□□□□□ -1.96
CHD1-204ENST00000505982 DEFB112Q30KQ8 113 aa2.83□□□□□ -1.96
CHD1-204ENST00000505982 LINC00575Q6W349 94 aa2.83□□□□□ -1.96
CHD1-204ENST00000505982 NOP10Q9NPE3 64 aaKnown RBP2.83□□□□□ -1.96
CHD1-204ENST00000505982 CNOT1A5YKK6 2376 aaKnown RBP2.83□□□□□ -1.96
CHD1-204ENST00000505982 ABCA2Q9BZC7 2435 aa2.83□□□□□ -1.96
CHD1-204ENST00000505982 TRAV10A0A0B4J240 114 aa2.82□□□□□ -1.96
CHD1-204ENST00000505982 CLPSL2Q6UWE3 100 aa2.82□□□□□ -1.96
CHD1-204ENST00000505982 FP248Q71RG6 208 aaPredicted RBP2.82□□□□□ -1.96
CHD1-204ENST00000505982 C1orf158Q8N1D5 194 aa2.82□□□□□ -1.96
CHD1-204ENST00000505982 TMEM254Q8TBM7 123 aa2.82□□□□□ -1.96
CHD1-204ENST00000505982 DIRC1Q969H9 104 aa2.82□□□□□ -1.96
CHD1-204ENST00000505982 NCOR1O75376 2440 aa2.81□□□□□ -1.96
CHD1-204ENST00000505982 RP1L1Q8IWN7 2480 aaPredicted RBP2.81□□□□□ -1.96
CHD1-204ENST00000505982 TRBV7-4A0A0J9YYF1 115 aa2.81□□□□□ -1.96
CHD1-204ENST00000505982 H3BPC8 53 aa2.81□□□□□ -1.96
CHD1-204ENST00000505982 ESRGQ1W209 222 aa2.81□□□□□ -1.96
CHD1-204ENST00000505982 DEFB114Q30KQ6 69 aa2.81□□□□□ -1.96
CHD1-204ENST00000505982 Q6ZQY7 126 aa2.81□□□□□ -1.96
CHD1-204ENST00000505982 ANKHD1Q8IWZ3 2542 aaKnown RBP2.81□□□□□ -1.96
CHD1-204ENST00000505982 FRYLO94915 3013 aa2.81□□□□□ -1.96
CHD1-204ENST00000505982 TRIOO75962 3097 aa2.8□□□□□ -1.96
CHD1-204ENST00000505982 ZZEF1O43149 2961 aa2.8□□□□□ -1.96
CHD1-204ENST00000505982 SPTBN1Q01082 2364 aaKnown RBP2.8□□□□□ -1.96
CHD1-204ENST00000505982 A0A096LNT2 108 aa2.8□□□□□ -1.96
CHD1-204ENST00000505982 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.8□□□□□ -1.96
CHD1-204ENST00000505982 LINC00474Q9P2X8 69 aa2.8□□□□□ -1.96
CHD1-204ENST00000505982 CACNA1BQ00975 2339 aa2.8□□□□□ -1.96
CHD1-204ENST00000505982 PTPRQQ9UMZ3 2332 aa2.8□□□□□ -1.96
CHD1-204ENST00000505982 FREM2Q5SZK8 3169 aa2.79□□□□□ -1.96
CHD1-204ENST00000505982 SPEGQ15772 3267 aa2.79□□□□□ -1.96
CHD1-204ENST00000505982 COX7BP24311 80 aa2.79□□□□□ -1.96
CHD1-204ENST00000505982 SPAG11BQ08648 103 aa2.79□□□□□ -1.96
CHD1-204ENST00000505982 MAP1BP46821 2468 aaKnown RBP2.79□□□□□ -1.96
CHD1-204ENST00000505982 PKD1L2Q7Z442 2459 aa2.79□□□□□ -1.96
CHD1-204ENST00000505982 FRYQ5TBA9 3013 aa2.79□□□□□ -1.96
CHD1-204ENST00000505982 COL6A6A6NMZ7 2263 aa2.79□□□□□ -1.96
CHD1-204ENST00000505982 EP300Q09472 2414 aaPredicted RBP2.78□□□□□ -1.96
CHD1-204ENST00000505982 ACACAQ13085 2346 aa2.78□□□□□ -1.96
CHD1-204ENST00000505982 C19orf84I3L1E1 186 aa2.78□□□□□ -1.96
CHD1-204ENST00000505982 M0R2N4 97 aa2.78□□□□□ -1.96
CHD1-204ENST00000505982 ANGP03950 147 aaKnown RBP2.78□□□□□ -1.96
CHD1-204ENST00000505982 NBEAQ8NFP9 2946 aa2.78□□□□□ -1.96
CHD1-204ENST00000505982 DEFB130BP0DP73 79 aa2.77□□□□□ -1.97
CHD1-204ENST00000505982 DEFB130AP0DP74 79 aa2.77□□□□□ -1.97
CHD1-204ENST00000505982 PRR15Q8IV56 129 aa2.77□□□□□ -1.97
CHD1-204ENST00000505982 LINC00269Q8N2A0 174 aa2.77□□□□□ -1.97
CHD1-204ENST00000505982 CFAP47Q6ZTR5 3102 aa2.77□□□□□ -1.97
CHD1-204ENST00000505982 PTPRZ1P23471 2315 aaPredicted RBP2.76□□□□□ -1.97
CHD1-204ENST00000505982 OTOGLQ3ZCN5 2332 aa2.76□□□□□ -1.97
CHD1-204ENST00000505982 CFAP54Q96N23 3096 aa2.76□□□□□ -1.97
CHD1-204ENST00000505982 PRB1P04280 392 aa2.76□□□□□ -1.97
CHD1-204ENST00000505982 C9orf116Q5BN46 136 aaPredicted RBP2.76□□□□□ -1.97
CHD1-204ENST00000505982 PSORS1C2Q9UIG4 136 aa2.76□□□□□ -1.97
CHD1-204ENST00000505982 VPS13AQ96RL7 3174 aa2.76□□□□□ -1.97
CHD1-204ENST00000505982 DSPP15924 2871 aaKnown RBP2.76□□□□□ -1.97
CHD1-204ENST00000505982 PIEZO2Q9H5I5 2752 aa2.75□□□□□ -1.97
CHD1-204ENST00000505982 CR1P17927 2039 aa2.75□□□□□ -1.97
CHD1-204ENST00000505982 SORL1Q92673 2214 aa2.75□□□□□ -1.97
CHD1-204ENST00000505982 VCANP13611 3396 aa2.75□□□□□ -1.97
CHD1-204ENST00000505982 A0A096LPF7 62 aa2.75□□□□□ -1.97
CHD1-204ENST00000505982 hDV103S1A0JD37 113 aa2.75□□□□□ -1.97
CHD1-204ENST00000505982 ELOF1P60002 83 aaKnown RBP2.75□□□□□ -1.97
CHD1-204ENST00000505982 PMAIP1Q13794 54 aa2.75□□□□□ -1.97
CHD1-204ENST00000505982 PRO0255Q9UI72 69 aa2.75□□□□□ -1.97
CHD1-204ENST00000505982 USP34Q70CQ2 3546 aa2.75□□□□□ -1.97
CHD1-204ENST00000505982 CACNA1HO95180 2353 aa2.74□□□□□ -1.97
CHD1-204ENST00000505982 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.74□□□□□ -1.97
CHD1-204ENST00000505982 PRUNE2Q8WUY3 3088 aa2.74□□□□□ -1.97
CHD1-204ENST00000505982 M0R378 163 aa2.74□□□□□ -1.97
CHD1-204ENST00000505982 UBE2BP63146 152 aa2.74□□□□□ -1.97
CHD1-204ENST00000505982 UNQ6190/PRO20217Q6UXQ8 127 aa2.74□□□□□ -1.97
CHD1-204ENST00000505982 Q8NDZ9 215 aa2.74□□□□□ -1.97
CHD1-204ENST00000505982 WFDC10AQ9H1F0 79 aa2.74□□□□□ -1.97
CHD1-204ENST00000505982 UNC79Q9P2D8 2635 aa2.74□□□□□ -1.97
CHD1-204ENST00000505982 EYSQ5T1H1 3165 aa2.73□□□□□ -1.97
CHD1-204ENST00000505982 GVQW2A0A096LPI5 108 aaPredicted RBP2.73□□□□□ -1.97
CHD1-204ENST00000505982 NDUFB1O75438 58 aa2.73□□□□□ -1.97
CHD1-204ENST00000505982 Q1T7F1 81 aa2.73□□□□□ -1.97
CHD1-204ENST00000505982 XAGE1AQ9HD64 81 aa2.73□□□□□ -1.97
CHD1-204ENST00000505982 ETDCA0A1B0GVM5 59 aa2.72□□□□□ -1.97
CHD1-204ENST00000505982 A0A1B0GW54 56 aa2.72□□□□□ -1.97
CHD1-204ENST00000505982 CELSR3Q9NYQ7 3312 aa2.71□□□□□ -1.97
CHD1-204ENST00000505982 LCE6AA0A183 80 aa2.71□□□□□ -1.98
CHD1-204ENST00000505982 IGLV1-51P01701 117 aa2.71□□□□□ -1.98
CHD1-204ENST00000505982 LELP1Q5T871 98 aa2.71□□□□□ -1.98
CHD1-204ENST00000505982 DEFB105AQ8NG35 78 aa2.71□□□□□ -1.98
CHD1-204ENST00000505982 C6orf48Q9UBA6 75 aa2.71□□□□□ -1.98
CHD1-204ENST00000505982 SPTA1P02549 2419 aa2.71□□□□□ -1.98
CHD1-204ENST00000505982 PRRC2CQ9Y520 2896 aaKnown RBP2.7□□□□□ -1.98
CHD1-204ENST00000505982 TRAV22A0A0B4J277 110 aa2.7□□□□□ -1.98
CHD1-204ENST00000505982 HCG22E2RYF7 251 aa2.7□□□□□ -1.98
CHD1-204ENST00000505982 HTN3P15516 51 aa2.7□□□□□ -1.98
CHD1-204ENST00000505982 CYP4F30PQ9H0H9 118 aa2.7□□□□□ -1.98
CHD1-204ENST00000505982 TNRC18O15417 2968 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms