RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 A4D1N5 150 aa5.06□□□□□ -1.6
LIMCH1-206ENST00000505705 PRYO14603 147 aa5.06□□□□□ -1.6
LIMCH1-206ENST00000505705 BCE1O60756 84 aa5.06□□□□□ -1.6
LIMCH1-206ENST00000505705 IGLV7-43P04211 117 aa5.06□□□□□ -1.6
LIMCH1-206ENST00000505705 INAFM2P0DMQ5 153 aa5.06□□□□□ -1.6
LIMCH1-206ENST00000505705 HINT1P49773 126 aaPredicted RBP5.06□□□□□ -1.6
LIMCH1-206ENST00000505705 TAL2Q16559 108 aa5.06□□□□□ -1.6
LIMCH1-206ENST00000505705 C2orf91Q6ZV80 131 aa5.06□□□□□ -1.6
LIMCH1-206ENST00000505705 KRTAP17-1Q9BYP8 105 aa5.06□□□□□ -1.6
LIMCH1-206ENST00000505705 KRTAP9-9Q9BYP9 154 aa5.06□□□□□ -1.6
LIMCH1-206ENST00000505705 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
LIMCH1-206ENST00000505705 PPDPFQ9H3Y8 114 aa5.06□□□□□ -1.6
LIMCH1-206ENST00000505705 TRAV23DV6A0A075B6W5 121 aa5.05□□□□□ -1.6
LIMCH1-206ENST00000505705 TMEM238LA0A1B0GVL6 79 aa5.05□□□□□ -1.6
LIMCH1-206ENST00000505705 ETDCA0A1B0GVM5 59 aa5.05□□□□□ -1.6
LIMCH1-206ENST00000505705 IGLV6-57P01721 117 aa5.05□□□□□ -1.6
LIMCH1-206ENST00000505705 RPL28P46779 137 aaKnown RBP5.05□□□□□ -1.6
LIMCH1-206ENST00000505705 SPINK6Q6UWN8 80 aa5.05□□□□□ -1.6
LIMCH1-206ENST00000505705 CEND1Q8N111 149 aa5.05□□□□□ -1.6
LIMCH1-206ENST00000505705 LINC00337Q8N6G1 96 aa5.05□□□□□ -1.6
LIMCH1-206ENST00000505705 RAB37Q96AX2 223 aa5.05□□□□□ -1.6
LIMCH1-206ENST00000505705 KRTAP4-5Q9BYR2 181 aa5.05□□□□□ -1.6
LIMCH1-206ENST00000505705 KCNQ1DNQ9H478 68 aa5.05□□□□□ -1.6
LIMCH1-206ENST00000505705 HERC2O95714 4834 aa5.05□□□□□ -1.6
LIMCH1-206ENST00000505705 TSTD3H0UI37 97 aa5.04□□□□□ -1.6
LIMCH1-206ENST00000505705 ZNF861PO60384 105 aa5.04□□□□□ -1.6
LIMCH1-206ENST00000505705 HSD52Q0P140 79 aa5.04□□□□□ -1.6
LIMCH1-206ENST00000505705 ZNF73O43830 326 aaPredicted RBP5.03□□□□□ -1.6
LIMCH1-206ENST00000505705 KRTAP10-4P60372 401 aaPredicted RBP5.03□□□□□ -1.6
LIMCH1-206ENST00000505705 PRLHP81277 87 aa5.03□□□□□ -1.6
LIMCH1-206ENST00000505705 DIRC1Q969H9 104 aa5.03□□□□□ -1.6
LIMCH1-206ENST00000505705 FAT1Q14517 4588 aa5.02□□□□□ -1.61
LIMCH1-206ENST00000505705 VPS13BQ7Z7G8 4022 aa5.02□□□□□ -1.61
LIMCH1-206ENST00000505705 KRTAP4-8A0A0G2JLE6 195 aa5.02□□□□□ -1.61
LIMCH1-206ENST00000505705 HIGD2AQ9BW72 106 aa5.02□□□□□ -1.61
LIMCH1-206ENST00000505705 H7C2G1 150 aa5.01□□□□□ -1.61
LIMCH1-206ENST00000505705 CFC1BP0CG36 223 aa5.01□□□□□ -1.61
LIMCH1-206ENST00000505705 CFC1P0CG37 223 aa5.01□□□□□ -1.61
LIMCH1-206ENST00000505705 SPRR1AP35321 89 aa5.01□□□□□ -1.61
LIMCH1-206ENST00000505705 RPL13AP40429 203 aaKnown RBP5.01□□□□□ -1.61
LIMCH1-206ENST00000505705 Q1RN00 199 aa5.01□□□□□ -1.61
LIMCH1-206ENST00000505705 H0Y9J4 135 aa5□□□□□ -1.61
LIMCH1-206ENST00000505705 FXYD2P54710 66 aa5□□□□□ -1.61
LIMCH1-206ENST00000505705 CTAG1AP78358 180 aa5□□□□□ -1.61
LIMCH1-206ENST00000505705 VAMP3Q15836 100 aa5□□□□□ -1.61
LIMCH1-206ENST00000505705 C6orf99Q4VX62 202 aa5□□□□□ -1.61
LIMCH1-206ENST00000505705 NHP2Q9NX24 153 aaKnown RBP5□□□□□ -1.61
LIMCH1-206ENST00000505705 A0A0B4J2C4 111 aa4.99□□□□□ -1.61
LIMCH1-206ENST00000505705 B5MCH6 92 aa4.99□□□□□ -1.61
LIMCH1-206ENST00000505705 COX7BP24311 80 aa4.99□□□□□ -1.61
LIMCH1-206ENST00000505705 SMIM11BQ8TCY0 68 aa4.99□□□□□ -1.61
LIMCH1-206ENST00000505705 M0R143 59 aa4.98□□□□□ -1.61
LIMCH1-206ENST00000505705 Q6ZRX8 168 aa4.98□□□□□ -1.61
LIMCH1-206ENST00000505705 SMCR5Q8TEV8 140 aa4.98□□□□□ -1.61
LIMCH1-206ENST00000505705 PRO1854Q9UHT4 67 aa4.98□□□□□ -1.61
LIMCH1-206ENST00000505705 ABCA13Q86UQ4 5058 aa4.97□□□□□ -1.61
LIMCH1-206ENST00000505705 A0A1B0GWB2 263 aa4.97□□□□□ -1.61
LIMCH1-206ENST00000505705 KRTAP4-16G5E9R7 235 aaPredicted RBP4.97□□□□□ -1.61
LIMCH1-206ENST00000505705 SLC25A20O43772 301 aa4.97□□□□□ -1.61
LIMCH1-206ENST00000505705 BVES-AS1Q5T3Y7 98 aa4.97□□□□□ -1.61
LIMCH1-206ENST00000505705 KRTAP13-1Q8IUC0 172 aa4.97□□□□□ -1.61
LIMCH1-206ENST00000505705 DHRS4-AS1Q9P1J3 65 aa4.97□□□□□ -1.61
LIMCH1-206ENST00000505705 TRBV7-6A0A0J9YX20 115 aa4.96□□□□□ -1.62
LIMCH1-206ENST00000505705 K7ERJ3 54 aa4.96□□□□□ -1.62
LIMCH1-206ENST00000505705 PSMB2P49721 201 aa4.96□□□□□ -1.62
LIMCH1-206ENST00000505705 ELOF1P60002 83 aaKnown RBP4.96□□□□□ -1.62
LIMCH1-206ENST00000505705 BATFQ16520 125 aa4.96□□□□□ -1.62
LIMCH1-206ENST00000505705 ZNF706Q9Y5V0 76 aaPredicted RBP4.96□□□□□ -1.62
LIMCH1-206ENST00000505705 SNCGO76070 127 aa4.95□□□□□ -1.62
LIMCH1-206ENST00000505705 OXTP01178 125 aa4.95□□□□□ -1.62
LIMCH1-206ENST00000505705 Q9BRP9 147 aa4.95□□□□□ -1.62
LIMCH1-206ENST00000505705 ERC2-IT1O76042 136 aa4.94□□□□□ -1.62
LIMCH1-206ENST00000505705 GAGE2AQ6NT46 116 aa4.94□□□□□ -1.62
LIMCH1-206ENST00000505705 ANAPC11Q9NYG5 84 aa4.94□□□□□ -1.62
LIMCH1-206ENST00000505705 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
LIMCH1-206ENST00000505705 hADV29S1A0JD25 119 aa4.93□□□□□ -1.62
LIMCH1-206ENST00000505705 COX6CP09669 75 aa4.93□□□□□ -1.62
LIMCH1-206ENST00000505705 SCGB1C2P0DMR2 95 aa4.93□□□□□ -1.62
LIMCH1-206ENST00000505705 DEFB105AQ8NG35 78 aa4.93□□□□□ -1.62
LIMCH1-206ENST00000505705 LINC01600Q96MT4 127 aa4.93□□□□□ -1.62
LIMCH1-206ENST00000505705 PCP4L1A6NKN8 68 aa4.92□□□□□ -1.62
LIMCH1-206ENST00000505705 KRTAP29-1A8MX34 341 aaPredicted RBP4.92□□□□□ -1.62
LIMCH1-206ENST00000505705 H0YGX0 51 aa4.92□□□□□ -1.62
LIMCH1-206ENST00000505705 CRYGAP11844 174 aa4.92□□□□□ -1.62
LIMCH1-206ENST00000505705 SPRR4Q96PI1 79 aa4.92□□□□□ -1.62
LIMCH1-206ENST00000505705 SRRM2Q9UQ35 2752 aaKnown RBP4.92□□□□□ -1.62
LIMCH1-206ENST00000505705 TRIAP1O43715 76 aa4.91□□□□□ -1.62
LIMCH1-206ENST00000505705 TSPAN13O95857 204 aa4.91□□□□□ -1.62
LIMCH1-206ENST00000505705 KRTAP1-4P0C5Y4 121 aa4.91□□□□□ -1.62
LIMCH1-206ENST00000505705 LINC00575Q6W349 94 aa4.91□□□□□ -1.62
LIMCH1-206ENST00000505705 PRR26Q8N8Z3 221 aa4.91□□□□□ -1.62
LIMCH1-206ENST00000505705 ST20-AS1Q8NBB2 130 aa4.91□□□□□ -1.62
LIMCH1-206ENST00000505705 PKHD1L1Q86WI1 4243 aa4.91□□□□□ -1.62
LIMCH1-206ENST00000505705 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
LIMCH1-206ENST00000505705 TYMSOSQ8TAI1 123 aa4.9□□□□□ -1.63
LIMCH1-206ENST00000505705 IGLV9-49A0A0B4J1Y8 123 aa4.89□□□□□ -1.63
LIMCH1-206ENST00000505705 FAM229BQ4G0N7 80 aa4.89□□□□□ -1.63
LIMCH1-206ENST00000505705 A0A087X002 238 aa4.88□□□□□ -1.63
LIMCH1-206ENST00000505705 TEX49A0A1B0GTD5 131 aa4.88□□□□□ -1.63
LIMCH1-206ENST00000505705 DNAL4O96015 105 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms