RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 NOTCH2NLQ7Z3S9 236 aa6.26□□□□□ -1.41
ITGA1-203ENST00000504669 KRTAP11-1Q8IUC1 163 aa6.26□□□□□ -1.41
ITGA1-203ENST00000504669 NAV3Q8IVL0 2385 aa6.26□□□□□ -1.41
ITGA1-203ENST00000504669 K7EIL1 84 aa6.23□□□□□ -1.41
ITGA1-203ENST00000504669 COL4A2P08572 1712 aa6.23□□□□□ -1.41
ITGA1-203ENST00000504669 MUC4Q99102 2169 aa6.22□□□□□ -1.41
ITGA1-203ENST00000504669 KRTAP4-16G5E9R7 235 aaPredicted RBP6.22□□□□□ -1.41
ITGA1-203ENST00000504669 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.42
ITGA1-203ENST00000504669 R4GN34 69 aa6.2□□□□□ -1.42
ITGA1-203ENST00000504669 COL6A6A6NMZ7 2263 aa6.19□□□□□ -1.42
ITGA1-203ENST00000504669 SPRR1AP35321 89 aa6.17□□□□□ -1.42
ITGA1-203ENST00000504669 M0QZ58 72 aa6.16□□□□□ -1.42
ITGA1-203ENST00000504669 CUL9Q8IWT3 2517 aa6.16□□□□□ -1.42
ITGA1-203ENST00000504669 TPRP12270 2363 aaKnown RBP6.16□□□□□ -1.42
ITGA1-203ENST00000504669 AKAP6Q13023 2319 aa6.15□□□□□ -1.42
ITGA1-203ENST00000504669 MAP1BP46821 2468 aaKnown RBP6.14□□□□□ -1.43
ITGA1-203ENST00000504669 PKDREJQ9NTG1 2253 aa6.13□□□□□ -1.43
ITGA1-203ENST00000504669 SPRR1BP22528 89 aa6.12□□□□□ -1.43
ITGA1-203ENST00000504669 ABCA4P78363 2273 aa6.11□□□□□ -1.43
ITGA1-203ENST00000504669 SPTBN1Q01082 2364 aaKnown RBP6.11□□□□□ -1.43
ITGA1-203ENST00000504669 TECTAO75443 2155 aa6.11□□□□□ -1.43
ITGA1-203ENST00000504669 A0A1W2PPR1 153 aa6.1□□□□□ -1.43
ITGA1-203ENST00000504669 SMR3AQ99954 134 aa6.1□□□□□ -1.43
ITGA1-203ENST00000504669 CR1P17927 2039 aa6.08□□□□□ -1.44
ITGA1-203ENST00000504669 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
ITGA1-203ENST00000504669 Q6ZSA8 131 aa6.07□□□□□ -1.44
ITGA1-203ENST00000504669 CACNA1BQ00975 2339 aa6.06□□□□□ -1.44
ITGA1-203ENST00000504669 A0A087WTM6 91 aa6.06□□□□□ -1.44
ITGA1-203ENST00000504669 PTPRQQ9UMZ3 2332 aa6.05□□□□□ -1.44
ITGA1-203ENST00000504669 PLCE1Q9P212 2302 aa6.05□□□□□ -1.44
ITGA1-203ENST00000504669 FAM186AA6NE01 2351 aa6.04□□□□□ -1.44
ITGA1-203ENST00000504669 P0C880 135 aa6.03□□□□□ -1.44
ITGA1-203ENST00000504669 APC2O95996 2303 aa6.03□□□□□ -1.44
ITGA1-203ENST00000504669 PLAC8Q9NZF1 115 aa6□□□□□ -1.45
ITGA1-203ENST00000504669 KRTAP10-9P60411 292 aa5.99□□□□□ -1.45
ITGA1-203ENST00000504669 KRTAP24-1Q3LI83 254 aa5.96□□□□□ -1.46
ITGA1-203ENST00000504669 CACNA1EQ15878 2313 aa5.93□□□□□ -1.46
ITGA1-203ENST00000504669 ROS1P08922 2347 aa5.92□□□□□ -1.46
ITGA1-203ENST00000504669 H0YAA0 97 aa5.91□□□□□ -1.46
ITGA1-203ENST00000504669 ACACAQ13085 2346 aa5.91□□□□□ -1.46
ITGA1-203ENST00000504669 WWC2-AS2Q96NR7 200 aa5.89□□□□□ -1.47
ITGA1-203ENST00000504669 KRTAP10-11P60412 298 aa5.89□□□□□ -1.47
ITGA1-203ENST00000504669 SMR3BP02814 79 aaPredicted RBP5.87□□□□□ -1.47
ITGA1-203ENST00000504669 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.86□□□□□ -1.475e-6■■■■□ 22.8
ITGA1-203ENST00000504669 RP1L1Q8IWN7 2480 aaPredicted RBP5.85□□□□□ -1.47
ITGA1-203ENST00000504669 TNP1P09430 55 aa5.83□□□□□ -1.48
ITGA1-203ENST00000504669 TRIOBPQ9H2D6 2365 aa5.8□□□□□ -1.48
ITGA1-203ENST00000504669 NOTCH3Q9UM47 2321 aa5.8□□□□□ -1.48
ITGA1-203ENST00000504669 CACNA1HO95180 2353 aa5.79□□□□□ -1.48
ITGA1-203ENST00000504669 KRTAP10-8P60410 259 aa5.78□□□□□ -1.48
ITGA1-203ENST00000504669 KRTAP10-3P60369 221 aa5.77□□□□□ -1.49
ITGA1-203ENST00000504669 CSPG4Q6UVK1 2322 aa5.75□□□□□ -1.49
ITGA1-203ENST00000504669 M0R2T5 61 aa5.75□□□□□ -1.49
ITGA1-203ENST00000504669 PCNX1Q96RV3 2341 aa5.74□□□□□ -1.49
ITGA1-203ENST00000504669 CACNA1GO43497 2377 aa5.73□□□□□ -1.49
ITGA1-203ENST00000504669 SPTBN2O15020 2390 aa5.72□□□□□ -1.49
ITGA1-203ENST00000504669 WNK1Q9H4A3 2382 aa5.7□□□□□ -1.5
ITGA1-203ENST00000504669 SPTAN1Q13813 2472 aaKnown RBP5.69□□□□□ -1.5
ITGA1-203ENST00000504669 INE1O15225 51 aa5.64□□□□□ -1.51
ITGA1-203ENST00000504669 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
ITGA1-203ENST00000504669 CNOT1A5YKK6 2376 aaKnown RBP5.62□□□□□ -1.51
ITGA1-203ENST00000504669 SPTA1P02549 2419 aa5.62□□□□□ -1.51
ITGA1-203ENST00000504669 TPRXLQ17RH7 258 aa5.61□□□□□ -1.51
ITGA1-203ENST00000504669 ZDBF2Q9HCK1 2354 aa5.58□□□□□ -1.52
ITGA1-203ENST00000504669 CEP290O15078 2479 aa5.56□□□□□ -1.52
ITGA1-203ENST00000504669 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
ITGA1-203ENST00000504669 RPS29P62273 56 aaKnown RBP5.53□□□□□ -1.52
ITGA1-203ENST00000504669 KRTAP7-1Q8IUC3 87 aa5.52□□□□□ -1.53
ITGA1-203ENST00000504669 NBASA2RRP1 2371 aa5.5□□□□□ -1.53
ITGA1-203ENST00000504669 KRTAP1-5Q9BYS1 174 aa5.47□□□□□ -1.53
ITGA1-203ENST00000504669 CREBBPQ92793 2442 aa5.45□□□□□ -1.54
ITGA1-203ENST00000504669 KRTAP13-1Q8IUC0 172 aa5.45□□□□□ -1.54
ITGA1-203ENST00000504669 SPG11Q96JI7 2443 aa5.44□□□□□ -1.54
ITGA1-203ENST00000504669 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
ITGA1-203ENST00000504669 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
ITGA1-203ENST00000504669 ATRXP46100 2492 aa5.42□□□□□ -1.54
ITGA1-203ENST00000504669 C2CD3Q4AC94 2353 aa5.42□□□□□ -1.54
ITGA1-203ENST00000504669 OTOGLQ3ZCN5 2332 aa5.41□□□□□ -1.54
ITGA1-203ENST00000504669 Q6ZRN7 208 aaPredicted RBP5.41□□□□□ -1.54
ITGA1-203ENST00000504669 HIVEP2P31629 2446 aa5.4□□□□□ -1.55
ITGA1-203ENST00000504669 EP300Q09472 2414 aaPredicted RBP5.38□□□□□ -1.55
ITGA1-203ENST00000504669 KRTAP13-2Q52LG2 175 aa5.37□□□□□ -1.55
ITGA1-203ENST00000504669 KRTAP10-1P60331 282 aa5.35□□□□□ -1.55
ITGA1-203ENST00000504669 ANKHD1Q8IWZ3 2542 aaKnown RBP5.35□□□□□ -1.55
ITGA1-203ENST00000504669 GVINP1Q7Z2Y8 2422 aa5.34□□□□□ -1.56
ITGA1-203ENST00000504669 GPR179Q6PRD1 2367 aa5.33□□□□□ -1.56
ITGA1-203ENST00000504669 KRTAP13-4Q3LI77 160 aa5.3□□□□□ -1.56
ITGA1-203ENST00000504669 KRTAP10-2P60368 255 aa5.3□□□□□ -1.56
ITGA1-203ENST00000504669 Q5VSD8 79 aa5.26□□□□□ -1.57
ITGA1-203ENST00000504669 KRTAP1-3Q8IUG1 177 aa5.25□□□□□ -1.57
ITGA1-203ENST00000504669 KRTAP13-3Q3SY46 172 aa5.24□□□□□ -1.57
ITGA1-203ENST00000504669 KRTAP12-1P59990 96 aa5.23□□□□□ -1.57
ITGA1-203ENST00000504669 SONP18583 2426 aaKnown RBP5.22□□□□□ -1.57
ITGA1-203ENST00000504669 KRTAP1-1Q07627 177 aa5.21□□□□□ -1.58
ITGA1-203ENST00000504669 WDR87Q6ZQQ6 2873 aa5.19□□□□□ -1.58
ITGA1-203ENST00000504669 FLG2Q5D862 2391 aaPredicted RBP5.18□□□□□ -1.58
ITGA1-203ENST00000504669 ZNF462Q96JM2 2506 aa5.12□□□□□ -1.59
ITGA1-203ENST00000504669 DOPEY1Q5JWR5 2465 aa5.1□□□□□ -1.59
ITGA1-203ENST00000504669 FN1P02751 2386 aaKnown RBP5.1□□□□□ -1.59
ITGA1-203ENST00000504669 XP32Q5T750 250 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms