RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 MEIG1Q5JSS6 88 aa4.72□□□□□ -1.65
RFC1-207ENST00000504554 MYMXA0A1B0GTQ4 84 aa4.71□□□□□ -1.66
RFC1-207ENST00000504554 J3QQQ9 107 aa4.71□□□□□ -1.66
RFC1-207ENST00000504554 NCR3O14931 201 aa4.71□□□□□ -1.66
RFC1-207ENST00000504554 ATP6V1G1O75348 118 aa4.71□□□□□ -1.66
RFC1-207ENST00000504554 UBE2AP49459 152 aa4.71□□□□□ -1.66
RFC1-207ENST00000504554 HERV-K104P63124 156 aa4.71□□□□□ -1.66
RFC1-207ENST00000504554 FAM19A1Q7Z5A9 133 aa4.71□□□□□ -1.66
RFC1-207ENST00000504554 BOD1L2Q8IYS8 172 aa4.71□□□□□ -1.66
RFC1-207ENST00000504554 SYS1-DBNDD2H3BUS1 97 aa4.7□□□□□ -1.66
RFC1-207ENST00000504554 PLEKHB2Q96CS7 222 aa4.7□□□□□ -1.66
RFC1-207ENST00000504554 MAP1LC3CQ9BXW4 147 aa4.7□□□□□ -1.66
RFC1-207ENST00000504554 MUC2Q02817 5179 aa4.69□□□□□ -1.66
RFC1-207ENST00000504554 LOC107984156A0A0G2JMH3 177 aa4.69□□□□□ -1.66
RFC1-207ENST00000504554 ADAMTSL4-AS1Q5T5F5 129 aa4.69□□□□□ -1.66
RFC1-207ENST00000504554 SOSTDC1Q6X4U4 206 aa4.69□□□□□ -1.66
RFC1-207ENST00000504554 ARL17AQ8IVW1 177 aa4.69□□□□□ -1.66
RFC1-207ENST00000504554 A0A0J9YXY3 114 aa4.68□□□□□ -1.66
RFC1-207ENST00000504554 TRBV10-3A0A0K0K1G6 114 aa4.68□□□□□ -1.66
RFC1-207ENST00000504554 E9PLD3 99 aa4.68□□□□□ -1.66
RFC1-207ENST00000504554 KRTAP4-16G5E9R7 235 aaPredicted RBP4.68□□□□□ -1.66
RFC1-207ENST00000504554 C3orf79P0CE67 100 aa4.68□□□□□ -1.66
RFC1-207ENST00000504554 LGALS3P17931 250 aaKnown RBP4.68□□□□□ -1.66
RFC1-207ENST00000504554 SPRR1AP35321 89 aa4.68□□□□□ -1.66
RFC1-207ENST00000504554 RPL13AP40429 203 aaKnown RBP4.68□□□□□ -1.66
RFC1-207ENST00000504554 HERVK_113P61574 105 aa4.68□□□□□ -1.66
RFC1-207ENST00000504554 COA6Q5JTJ3 125 aaKnown RBP4.68□□□□□ -1.66
RFC1-207ENST00000504554 LINC01545Q5VT33 79 aa4.68□□□□□ -1.66
RFC1-207ENST00000504554 TTTY13Q9BZ97 58 aa4.68□□□□□ -1.66
RFC1-207ENST00000504554 IGKV2D-26A0A0A0MRZ7 120 aa4.67□□□□□ -1.66
RFC1-207ENST00000504554 TSPAN13O95857 204 aa4.67□□□□□ -1.66
RFC1-207ENST00000504554 CRYGAP11844 174 aa4.67□□□□□ -1.66
RFC1-207ENST00000504554 NMUP48645 174 aa4.67□□□□□ -1.66
RFC1-207ENST00000504554 NPC2P61916 151 aa4.67□□□□□ -1.66
RFC1-207ENST00000504554 LITAFQ99732 161 aa4.67□□□□□ -1.66
RFC1-207ENST00000504554 KCNQ1DNQ9H478 68 aa4.67□□□□□ -1.66
RFC1-207ENST00000504554 LINC00587B1AMM8 73 aa4.66□□□□□ -1.66
RFC1-207ENST00000504554 C3orf22Q8N5N4 141 aa4.66□□□□□ -1.66
RFC1-207ENST00000504554 TYMSOSQ8TAI1 123 aa4.66□□□□□ -1.66
RFC1-207ENST00000504554 HIGD2AQ9BW72 106 aa4.66□□□□□ -1.66
RFC1-207ENST00000504554 KRTDAPP60985 99 aa4.65□□□□□ -1.67
RFC1-207ENST00000504554 FAM229BQ4G0N7 80 aa4.65□□□□□ -1.67
RFC1-207ENST00000504554 LINC00337Q8N6G1 96 aa4.65□□□□□ -1.67
RFC1-207ENST00000504554 SMCR5Q8TEV8 140 aa4.65□□□□□ -1.67
RFC1-207ENST00000504554 SPRR4Q96PI1 79 aa4.65□□□□□ -1.67
RFC1-207ENST00000504554 ERC2-IT1O76042 136 aa4.64□□□□□ -1.67
RFC1-207ENST00000504554 IGLV6-57P01721 117 aa4.64□□□□□ -1.67
RFC1-207ENST00000504554 DDTP30046 118 aa4.64□□□□□ -1.67
RFC1-207ENST00000504554 TRBV10-2A0A0K0K1G8 114 aa4.63□□□□□ -1.67
RFC1-207ENST00000504554 NDUFC2O95298 119 aa4.63□□□□□ -1.67
RFC1-207ENST00000504554 PRR4Q16378 134 aa4.63□□□□□ -1.67
RFC1-207ENST00000504554 ATOH7Q8N100 152 aa4.63□□□□□ -1.67
RFC1-207ENST00000504554 LINC00308Q8TCZ7 52 aa4.63□□□□□ -1.67
RFC1-207ENST00000504554 Q9BRP9 147 aa4.63□□□□□ -1.67
RFC1-207ENST00000504554 SPANXB1Q9NS25 103 aaPredicted RBP4.63□□□□□ -1.67
RFC1-207ENST00000504554 ETDCA0A1B0GVM5 59 aa4.62□□□□□ -1.67
RFC1-207ENST00000504554 ZNF815PA8K554 130 aa4.62□□□□□ -1.67
RFC1-207ENST00000504554 PPDPFQ9H3Y8 114 aa4.62□□□□□ -1.67
RFC1-207ENST00000504554 TIMM17BO60830 172 aa4.61□□□□□ -1.67
RFC1-207ENST00000504554 LINC00304Q8N9R0 145 aa4.61□□□□□ -1.67
RFC1-207ENST00000504554 RETNLBQ9BQ08 111 aa4.61□□□□□ -1.67
RFC1-207ENST00000504554 TRAV23DV6A0A075B6W5 121 aa4.6□□□□□ -1.67
RFC1-207ENST00000504554 LINC00483Q53H64 154 aa4.6□□□□□ -1.67
RFC1-207ENST00000504554 PCP2Q8IVA1 136 aa4.6□□□□□ -1.67
RFC1-207ENST00000504554 HIST3H2BBQ8N257 126 aa4.6□□□□□ -1.67
RFC1-207ENST00000504554 MIEN1Q9BRT3 115 aa4.6□□□□□ -1.67
RFC1-207ENST00000504554 FAT4Q6V0I7 4981 aa4.6□□□□□ -1.67
RFC1-207ENST00000504554 S100A7L2Q5SY68 101 aa4.59□□□□□ -1.67
RFC1-207ENST00000504554 Q6ZRX8 168 aa4.59□□□□□ -1.67
RFC1-207ENST00000504554 HIST1H2BLQ99880 126 aa4.59□□□□□ -1.67
RFC1-207ENST00000504554 ZNF73O43830 326 aaPredicted RBP4.58□□□□□ -1.68
RFC1-207ENST00000504554 S100A1P23297 94 aa4.58□□□□□ -1.68
RFC1-207ENST00000504554 ST20-AS1Q8NBB2 130 aa4.58□□□□□ -1.68
RFC1-207ENST00000504554 SPANXDQ9BXN6 97 aa4.58□□□□□ -1.68
RFC1-207ENST00000504554 SPANXCQ9NY87 97 aa4.58□□□□□ -1.68
RFC1-207ENST00000504554 C20orf202A1L168 122 aa4.57□□□□□ -1.68
RFC1-207ENST00000504554 Q8NBF4 154 aa4.57□□□□□ -1.68
RFC1-207ENST00000504554 ZNF706Q9Y5V0 76 aaPredicted RBP4.57□□□□□ -1.68
RFC1-207ENST00000504554 OR13C6PQ8NH95 151 aa4.56□□□□□ -1.68
RFC1-207ENST00000504554 IGLV9-49A0A0B4J1Y8 123 aa4.55□□□□□ -1.68
RFC1-207ENST00000504554 S100A12P80511 92 aa4.55□□□□□ -1.68
RFC1-207ENST00000504554 MOBPQ13875 183 aa4.55□□□□□ -1.68
RFC1-207ENST00000504554 SCGB1D4Q6XE38 83 aa4.55□□□□□ -1.68
RFC1-207ENST00000504554 MUSTN1Q8IVN3 82 aa4.55□□□□□ -1.68
RFC1-207ENST00000504554 S100A2P29034 98 aa4.53□□□□□ -1.68
RFC1-207ENST00000504554 ELOF1P60002 83 aaKnown RBP4.53□□□□□ -1.68
RFC1-207ENST00000504554 C6orf99Q4VX62 202 aa4.53□□□□□ -1.68
RFC1-207ENST00000504554 IGLV7-46A0A075B6I9 117 aa4.52□□□□□ -1.69
RFC1-207ENST00000504554 IFITM1P13164 125 aa4.52□□□□□ -1.69
RFC1-207ENST00000504554 CTAG1AP78358 180 aa4.52□□□□□ -1.69
RFC1-207ENST00000504554 JOSD1Q15040 202 aaPredicted RBP4.52□□□□□ -1.69
RFC1-207ENST00000504554 SPAG11AQ6PDA7 123 aa4.52□□□□□ -1.69
RFC1-207ENST00000504554 LINC00518Q8N0U6 118 aa4.52□□□□□ -1.69
RFC1-207ENST00000504554 S100A6P06703 90 aa4.51□□□□□ -1.69
RFC1-207ENST00000504554 SPRR1BP22528 89 aa4.51□□□□□ -1.69
RFC1-207ENST00000504554 COX7BP24311 80 aa4.51□□□□□ -1.69
RFC1-207ENST00000504554 SSBP3-AS1Q7Z2R9 100 aa4.51□□□□□ -1.69
RFC1-207ENST00000504554 SPINK1P00995 79 aa4.5□□□□□ -1.69
RFC1-207ENST00000504554 HINT1P49773 126 aaPredicted RBP4.5□□□□□ -1.69
RFC1-207ENST00000504554 AKR1D1P51857 326 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms