RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 A8MUU9 505 aa4.02□□□□□ -1.77
CLCN3-204ENST00000504131 MKI67P46013 3256 aaKnown RBP4.02□□□□□ -1.77
CLCN3-204ENST00000504131 SPATA8Q6RVD6 105 aa4.02□□□□□ -1.77
CLCN3-204ENST00000504131 Q8NDZ9 215 aa4.01□□□□□ -1.77
CLCN3-204ENST00000504131 NOP10Q9NPE3 64 aaKnown RBP4.01□□□□□ -1.77
CLCN3-204ENST00000504131 IGLV1-40P01703 118 aa4.01□□□□□ -1.77
CLCN3-204ENST00000504131 RTL8CO15255 209 aa4□□□□□ -1.77
CLCN3-204ENST00000504131 DEFB136Q30KP8 78 aa4□□□□□ -1.77
CLCN3-204ENST00000504131 FASNP49327 2511 aaKnown RBP4□□□□□ -1.77
CLCN3-204ENST00000504131 HRES1P13985 223 aa4□□□□□ -1.77
CLCN3-204ENST00000504131 LINC00304Q8N9R0 145 aa4□□□□□ -1.77
CLCN3-204ENST00000504131 PRUNE2Q8WUY3 3088 aa4□□□□□ -1.77
CLCN3-204ENST00000504131 APLNQ9ULZ1 77 aa3.99□□□□□ -1.77
CLCN3-204ENST00000504131 CCDC168Q8NDH2 2452 aa3.99□□□□□ -1.77
CLCN3-204ENST00000504131 MRGPRG-AS1Q2M3A8 158 aa3.99□□□□□ -1.77
CLCN3-204ENST00000504131 PRO0255Q9UI72 69 aa3.99□□□□□ -1.77
CLCN3-204ENST00000504131 MYO18BQ8IUG5 2567 aa3.98□□□□□ -1.77
CLCN3-204ENST00000504131 SONP18583 2426 aaKnown RBP3.98□□□□□ -1.77
CLCN3-204ENST00000504131 ABCA1O95477 2261 aa3.98□□□□□ -1.77
CLCN3-204ENST00000504131 CSPG4Q6UVK1 2322 aa3.98□□□□□ -1.77
CLCN3-204ENST00000504131 SPINK6Q6UWN8 80 aa3.97□□□□□ -1.77
CLCN3-204ENST00000504131 LAMA2P24043 3122 aaKnown RBP3.97□□□□□ -1.77
CLCN3-204ENST00000504131 TYMSOSQ8TAI1 123 aa3.97□□□□□ -1.77
CLCN3-204ENST00000504131 NAV3Q8IVL0 2385 aa3.97□□□□□ -1.77
CLCN3-204ENST00000504131 KRTAP10-9P60411 292 aa3.96□□□□□ -1.78
CLCN3-204ENST00000504131 SPTBN4Q9H254 2564 aa3.96□□□□□ -1.78
CLCN3-204ENST00000504131 LINC00315P59091 139 aa3.96□□□□□ -1.78
CLCN3-204ENST00000504131 XIRP2A4UGR9 3374 aa3.96□□□□□ -1.78
CLCN3-204ENST00000504131 RAI1Q7Z5J4 1906 aaPredicted RBP3.95□□□□□ -1.78
CLCN3-204ENST00000504131 ZNF462Q96JM2 2506 aa3.95□□□□□ -1.78
CLCN3-204ENST00000504131 CDH23Q9H251 3354 aa3.95□□□□□ -1.78
CLCN3-204ENST00000504131 ZCCHC13Q8WW36 166 aaKnown RBP3.95□□□□□ -1.78
CLCN3-204ENST00000504131 TLN1Q9Y490 2541 aaKnown RBP3.94□□□□□ -1.78
CLCN3-204ENST00000504131 SZT2Q5T011 3432 aa3.94□□□□□ -1.78
CLCN3-204ENST00000504131 UNQ6190/PRO20217Q6UXQ8 127 aa3.94□□□□□ -1.78
CLCN3-204ENST00000504131 IGKV2D-30A0A075B6S6 120 aa3.94□□□□□ -1.78
CLCN3-204ENST00000504131 IGKV2-30P06310 120 aa3.94□□□□□ -1.78
CLCN3-204ENST00000504131 Q6ZRX8 168 aa3.94□□□□□ -1.78
CLCN3-204ENST00000504131 ZNF861PO60384 105 aa3.94□□□□□ -1.78
CLCN3-204ENST00000504131 CNBPP62633 177 aaKnown RBP3.92□□□□□ -1.78
CLCN3-204ENST00000504131 ZNF575Q86XF7 245 aa3.92□□□□□ -1.78
CLCN3-204ENST00000504131 MRPL34Q9BQ48 92 aaKnown RBP3.92□□□□□ -1.78
CLCN3-204ENST00000504131 HIVEP3Q5T1R4 2406 aa3.92□□□□□ -1.78
CLCN3-204ENST00000504131 ANKRD11Q6UB99 2663 aaPredicted RBP3.92□□□□□ -1.78
CLCN3-204ENST00000504131 A0A1W2PNN7 141 aa3.92□□□□□ -1.78
CLCN3-204ENST00000504131 LRRK2Q5S007 2527 aa3.92□□□□□ -1.78
CLCN3-204ENST00000504131 EPG5Q9HCE0 2579 aa3.91□□□□□ -1.78
CLCN3-204ENST00000504131 Q6ZSN1 163 aa3.91□□□□□ -1.78
CLCN3-204ENST00000504131 SMR3AQ99954 134 aa3.91□□□□□ -1.78
CLCN3-204ENST00000504131 ABCA2Q9BZC7 2435 aa3.9□□□□□ -1.78
CLCN3-204ENST00000504131 A0A1B0GU33 70 aa3.9□□□□□ -1.78
CLCN3-204ENST00000504131 PKD1L2Q7Z442 2459 aa3.9□□□□□ -1.79
CLCN3-204ENST00000504131 DSCR10P59022 87 aa3.9□□□□□ -1.79
CLCN3-204ENST00000504131 CEP295Q9C0D2 2601 aa3.9□□□□□ -1.79
CLCN3-204ENST00000504131 EYSQ5T1H1 3165 aa3.89□□□□□ -1.79
CLCN3-204ENST00000504131 IGKV2-24A0A0C4DH68 120 aa3.89□□□□□ -1.79
CLCN3-204ENST00000504131 ZFYVE26Q68DK2 2539 aa3.89□□□□□ -1.79
CLCN3-204ENST00000504131 IGLV6-57P01721 117 aa3.88□□□□□ -1.79
CLCN3-204ENST00000504131 DEFB135Q30KP9 77 aa3.88□□□□□ -1.79
CLCN3-204ENST00000504131 C2CD3Q4AC94 2353 aa3.88□□□□□ -1.79
CLCN3-204ENST00000504131 LINC00612Q8N6U2 182 aa3.88□□□□□ -1.79
CLCN3-204ENST00000504131 Q5W150 140 aa3.87□□□□□ -1.79
CLCN3-204ENST00000504131 A0A0D9SG42 100 aa3.87□□□□□ -1.79
CLCN3-204ENST00000504131 LELP1Q5T871 98 aa3.87□□□□□ -1.79
CLCN3-204ENST00000504131 RANBP2P49792 3224 aaKnown RBP3.86□□□□□ -1.79
CLCN3-204ENST00000504131 LY6G6CO95867 125 aa3.86□□□□□ -1.79
CLCN3-204ENST00000504131 CR1P17927 2039 aa3.86□□□□□ -1.79
CLCN3-204ENST00000504131 A0A0G2JQZ4 141 aa3.86□□□□□ -1.79
CLCN3-204ENST00000504131 LCE6AA0A183 80 aa3.86□□□□□ -1.79
CLCN3-204ENST00000504131 P0C880 135 aa3.86□□□□□ -1.79
CLCN3-204ENST00000504131 C15orf56Q8N910 161 aa3.86□□□□□ -1.79
CLCN3-204ENST00000504131 SPRR4Q96PI1 79 aa3.85□□□□□ -1.79
CLCN3-204ENST00000504131 C5orf42Q9H799 3197 aa3.85□□□□□ -1.79
CLCN3-204ENST00000504131 JMJD1CQ15652 2540 aa3.85□□□□□ -1.79
CLCN3-204ENST00000504131 NOTCH3Q9UM47 2321 aa3.85□□□□□ -1.79
CLCN3-204ENST00000504131 KRTAP24-1Q3LI83 254 aa3.85□□□□□ -1.79
CLCN3-204ENST00000504131 WWC2-AS2Q96NR7 200 aa3.84□□□□□ -1.79
CLCN3-204ENST00000504131 PIEZO2Q9H5I5 2752 aa3.84□□□□□ -1.79
CLCN3-204ENST00000504131 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
CLCN3-204ENST00000504131 C10orf99Q6UWK7 81 aa3.84□□□□□ -1.79
CLCN3-204ENST00000504131 Q96NJ1 140 aa3.84□□□□□ -1.79
CLCN3-204ENST00000504131 LAMA3Q16787 3333 aa3.83□□□□□ -1.8
CLCN3-204ENST00000504131 DOPEY1Q5JWR5 2465 aa3.83□□□□□ -1.8
CLCN3-204ENST00000504131 FAM168BA1KXE4 195 aa3.83□□□□□ -1.8
CLCN3-204ENST00000504131 PSORS1C2Q9UIG4 136 aa3.83□□□□□ -1.8
CLCN3-204ENST00000504131 A0A0C4DFX4 3053 aa3.83□□□□□ -1.8
CLCN3-204ENST00000504131 A0A1W2PPR1 153 aa3.83□□□□□ -1.8
CLCN3-204ENST00000504131 FLNBO75369 2602 aaKnown RBP3.82□□□□□ -1.8
CLCN3-204ENST00000504131 MTORP42345 2549 aa3.82□□□□□ -1.8
CLCN3-204ENST00000504131 MUC3AQ02505 3323 aa3.82□□□□□ -1.8
CLCN3-204ENST00000504131 Q8N377 158 aa3.81□□□□□ -1.8
CLCN3-204ENST00000504131 UNC80Q8N2C7 3258 aa3.81□□□□□ -1.8
CLCN3-204ENST00000504131 F8P00451 2351 aa3.81□□□□□ -1.8
CLCN3-204ENST00000504131 NBDYA0A0U1RRE5 68 aa3.81□□□□□ -1.8
CLCN3-204ENST00000504131 BSNQ9UPA5 3926 aa3.81□□□□□ -1.8
CLCN3-204ENST00000504131 A0A096LNT2 108 aa3.8□□□□□ -1.8
CLCN3-204ENST00000504131 IGFL1Q6UW32 110 aa3.8□□□□□ -1.8
CLCN3-204ENST00000504131 DMDP11532 3685 aa3.8□□□□□ -1.8
CLCN3-204ENST00000504131 WDFY3Q8IZQ1 3526 aa3.8□□□□□ -1.8
CLCN3-204ENST00000504131 KRTAP4-16G5E9R7 235 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms