RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 SPANXB1Q9NS25 103 aaPredicted RBP12.88□□□□□ -0.35
LSM6-203ENST00000503982 DLEU1O43261 78 aa12.87□□□□□ -0.35
LSM6-203ENST00000503982 EIF4EBP3O60516 100 aaPredicted RBP12.87□□□□□ -0.35
LSM6-203ENST00000503982 RETNLBQ9BQ08 111 aa12.87□□□□□ -0.35
LSM6-203ENST00000503982 IFITM1P13164 125 aa12.86□□□□□ -0.35
LSM6-203ENST00000503982 COPS9Q8WXC6 57 aa12.86□□□□□ -0.35
LSM6-203ENST00000503982 COX8AP10176 69 aa12.85□□□□□ -0.35
LSM6-203ENST00000503982 PYY3Q5JQD4 70 aa12.85□□□□□ -0.35
LSM6-203ENST00000503982 PRYO14603 147 aa12.83□□□□□ -0.36
LSM6-203ENST00000503982 VAMP8Q9BV40 100 aa12.83□□□□□ -0.36
LSM6-203ENST00000503982 KCNQ1DNQ9H478 68 aa12.83□□□□□ -0.36
LSM6-203ENST00000503982 ETDCA0A1B0GVM5 59 aa12.82□□□□□ -0.36
LSM6-203ENST00000503982 S100A12P80511 92 aa12.82□□□□□ -0.36
LSM6-203ENST00000503982 C3orf22Q8N5N4 141 aa12.82□□□□□ -0.36
LSM6-203ENST00000503982 ZNF706Q9Y5V0 76 aaPredicted RBP12.82□□□□□ -0.36
LSM6-203ENST00000503982 SPRR1AP35321 89 aa12.81□□□□□ -0.36
LSM6-203ENST00000503982 IGLV6-57P01721 117 aa12.8□□□□□ -0.36
LSM6-203ENST00000503982 SPATA45Q537H7 98 aa12.8□□□□□ -0.36
LSM6-203ENST00000503982 NPC2P61916 151 aa12.79□□□□□ -0.36
LSM6-203ENST00000503982 SPRR4Q96PI1 79 aa12.79□□□□□ -0.36
LSM6-203ENST00000503982 PAM16Q9Y3D7 125 aa12.79□□□□□ -0.36
LSM6-203ENST00000503982 TRBV10-3A0A0K0K1G6 114 aa12.78□□□□□ -0.36
LSM6-203ENST00000503982 DDTP30046 118 aa12.77□□□□□ -0.37
LSM6-203ENST00000503982 LINC00518Q8N0U6 118 aa12.77□□□□□ -0.37
LSM6-203ENST00000503982 LINC00337Q8N6G1 96 aa12.77□□□□□ -0.37
LSM6-203ENST00000503982 KRTAP4-16G5E9R7 235 aaPredicted RBP12.76□□□□□ -0.37
LSM6-203ENST00000503982 C4orf48Q5BLP8 95 aa12.76□□□□□ -0.37
LSM6-203ENST00000503982 SMCR5Q8TEV8 140 aa12.76□□□□□ -0.37
LSM6-203ENST00000503982 CBY1Q9Y3M2 126 aa12.76□□□□□ -0.37
LSM6-203ENST00000503982 MUSTN1Q8IVN3 82 aa12.74□□□□□ -0.37
LSM6-203ENST00000503982 HIGD1BQ9P298 99 aa12.74□□□□□ -0.37
LSM6-203ENST00000503982 CDIP1Q9H305 208 aa12.73□□□□□ -0.37
LSM6-203ENST00000503982 IGLV7-46A0A075B6I9 117 aa12.72□□□□□ -0.37
LSM6-203ENST00000503982 A0A0U1RQV1 116 aa12.72□□□□□ -0.37
LSM6-203ENST00000503982 S100A7L2Q5SY68 101 aa12.72□□□□□ -0.37
LSM6-203ENST00000503982 SLC25A34Q6PIV7 304 aa12.72□□□□□ -0.37
LSM6-203ENST00000503982 SPAG11AQ6PDA7 123 aa12.71□□□□□ -0.37
LSM6-203ENST00000503982 C14orf144Q96I85 54 aa12.71□□□□□ -0.37
LSM6-203ENST00000503982 CTAG1AP78358 180 aa12.69□□□□□ -0.38
LSM6-203ENST00000503982 TRAV23DV6A0A075B6W5 121 aa12.68□□□□□ -0.38
LSM6-203ENST00000503982 C2orf91Q6ZV80 131 aa12.68□□□□□ -0.38
LSM6-203ENST00000503982 GAGE2AQ6NT46 116 aa12.67□□□□□ -0.38
LSM6-203ENST00000503982 Q8NBF4 154 aa12.67□□□□□ -0.38
LSM6-203ENST00000503982 MUC2Q02817 5179 aa12.66□□□□□ -0.38
LSM6-203ENST00000503982 B5MCH6 92 aa12.65□□□□□ -0.38
LSM6-203ENST00000503982 TRAV13-2A0A0B4J235 113 aa12.64□□□□□ -0.39
LSM6-203ENST00000503982 ZNF73O43830 326 aaPredicted RBP12.64□□□□□ -0.39
LSM6-203ENST00000503982 TAL2Q16559 108 aa12.64□□□□□ -0.39
LSM6-203ENST00000503982 TPRXLQ17RH7 258 aa12.64□□□□□ -0.39
LSM6-203ENST00000503982 IGLV9-49A0A0B4J1Y8 123 aa12.63□□□□□ -0.39
LSM6-203ENST00000503982 HIST1H4GQ99525 98 aa12.63□□□□□ -0.39
LSM6-203ENST00000503982 A4D1N5 150 aa12.62□□□□□ -0.39
LSM6-203ENST00000503982 SMIM6P0DI80 62 aa12.62□□□□□ -0.39
LSM6-203ENST00000503982 Q6ZRX8 168 aa12.62□□□□□ -0.39
LSM6-203ENST00000503982 OR13C6PQ8NH95 151 aa12.61□□□□□ -0.39
LSM6-203ENST00000503982 TRBV7-6A0A0J9YX20 115 aa12.59□□□□□ -0.39
LSM6-203ENST00000503982 ERC2-IT1O76042 136 aa12.59□□□□□ -0.39
LSM6-203ENST00000503982 MOBPQ13875 183 aa12.59□□□□□ -0.39
LSM6-203ENST00000503982 LINC00483Q53H64 154 aa12.58□□□□□ -0.4
LSM6-203ENST00000503982 HINT1P49773 126 aaPredicted RBP12.57□□□□□ -0.4
LSM6-203ENST00000503982 UQCR10Q9UDW1 63 aa12.57□□□□□ -0.4
LSM6-203ENST00000503982 LOC105371267A0A1B0GV96 52 aa12.56□□□□□ -0.4
LSM6-203ENST00000503982 SPINK1P00995 79 aa12.56□□□□□ -0.4
LSM6-203ENST00000503982 FP248Q71RG6 208 aaPredicted RBP12.56□□□□□ -0.4
LSM6-203ENST00000503982 Q9BRP9 147 aa12.56□□□□□ -0.4
LSM6-203ENST00000503982 A6NDN8 102 aa12.55□□□□□ -0.4
LSM6-203ENST00000503982 ELOF1P60002 83 aaKnown RBP12.55□□□□□ -0.4
LSM6-203ENST00000503982 C9orf153Q5TBE3 101 aa12.54□□□□□ -0.4
LSM6-203ENST00000503982 C6orf99Q4VX62 202 aa12.53□□□□□ -0.4
LSM6-203ENST00000503982 CEND1Q8N111 149 aa12.53□□□□□ -0.4
LSM6-203ENST00000503982 MUC17Q685J3 4493 aa12.52□□□□□ -0.4
LSM6-203ENST00000503982 A0A0B4J2C4 111 aa12.52□□□□□ -0.41
LSM6-203ENST00000503982 SSBP3-AS1Q7Z2R9 100 aa12.52□□□□□ -0.41
LSM6-203ENST00000503982 HSD52Q0P140 79 aa12.51□□□□□ -0.41
LSM6-203ENST00000503982 TMEM238LA0A1B0GVL6 79 aa12.5□□□□□ -0.41
LSM6-203ENST00000503982 A0A1B0GWB2 263 aa12.5□□□□□ -0.41
LSM6-203ENST00000503982 A6NJY4 79 aa12.5□□□□□ -0.41
LSM6-203ENST00000503982 SMIM11BQ8TCY0 68 aa12.5□□□□□ -0.41
LSM6-203ENST00000503982 DHRS4-AS1Q9P1J3 65 aa12.5□□□□□ -0.41
LSM6-203ENST00000503982 CFC1BP0CG36 223 aa12.49□□□□□ -0.41
LSM6-203ENST00000503982 CFC1P0CG37 223 aa12.49□□□□□ -0.41
LSM6-203ENST00000503982 COX7BP24311 80 aa12.48□□□□□ -0.41
LSM6-203ENST00000503982 ST20-AS1Q8NBB2 130 aa12.46□□□□□ -0.41
LSM6-203ENST00000503982 FXYD2P54710 66 aa12.45□□□□□ -0.42
LSM6-203ENST00000503982 C12orf57Q99622 126 aa12.44□□□□□ -0.42
LSM6-203ENST00000503982 SLC25A20O43772 301 aa12.42□□□□□ -0.42
LSM6-203ENST00000503982 KRTAP13-3Q3SY46 172 aa12.42□□□□□ -0.42
LSM6-203ENST00000503982 RPS29P62273 56 aaKnown RBP12.41□□□□□ -0.42
LSM6-203ENST00000503982 Q8N377 158 aa12.41□□□□□ -0.42
LSM6-203ENST00000503982 RAB37Q96AX2 223 aa12.41□□□□□ -0.42
LSM6-203ENST00000503982 SPRR1BP22528 89 aa12.4□□□□□ -0.42
LSM6-203ENST00000503982 VAMP3Q15836 100 aa12.4□□□□□ -0.42
LSM6-203ENST00000503982 BVES-AS1Q5T3Y7 98 aa12.39□□□□□ -0.43
LSM6-203ENST00000503982 NHP2Q9NX24 153 aaKnown RBP12.39□□□□□ -0.43
LSM6-203ENST00000503982 PRO1854Q9UHT4 67 aa12.39□□□□□ -0.43
LSM6-203ENST00000503982 FAT4Q6V0I7 4981 aa12.38□□□□□ -0.43
LSM6-203ENST00000503982 PRO1933Q9H354 126 aa12.37□□□□□ -0.43
LSM6-203ENST00000503982 HRCT1Q6UXD1 115 aa12.35□□□□□ -0.43
LSM6-203ENST00000503982 LINC00575Q6W349 94 aa12.35□□□□□ -0.43
LSM6-203ENST00000503982 IGLV5-48A0A075B6I7 105 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms