RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 SPANXA1Q9NS26 97 aa2.01□□□□□ -2.09
UBE3D-205ENST00000503942 CYSLTR1Q9Y271 337 aa2.01□□□□□ -2.09
UBE3D-205ENST00000503942 VPS13BQ7Z7G8 4022 aa2.01□□□□□ -2.09
UBE3D-205ENST00000503942 HIST1H2BKO60814 126 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 HIST1H2BJP06899 126 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 S100A1P23297 94 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 HIST1H2BOP23527 126 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 HIST1H2BBP33778 126 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 HIST1H2BDP58876 126 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 HIST1H2BCP62807 126 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 SS18Q15532 418 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 HIST2H2BEQ16778 126 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 HIST2H2BFQ5QNW6 126 aaPredicted RBP2□□□□□ -2.09
UBE3D-205ENST00000503942 BAGE3Q86Y29 109 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 HIST1H2BHQ93079 126 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 TMEM141Q96I45 108 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 HIST1H2BNQ99877 126 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 HIST1H2BMQ99879 126 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 KRTAP4-1Q9BYQ7 146 aa2□□□□□ -2.09
UBE3D-205ENST00000503942 C11orf86A6NJI1 115 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 C1orf196B1AJZ1 125 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 K7EMI3 77 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 COX7A2LO14548 114 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 HBDP02042 147 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 SPINK8P0C7L1 97 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 FABP4P15090 132 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 NDUFA6P56556 154 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 RAB5BP61020 215 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 Q6ZRU5 148 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 KRTAP13-1Q8IUC0 172 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 CHCHD1Q96BP2 118 aaKnown RBP1.99□□□□□ -2.09
UBE3D-205ENST00000503942 PMCHL2Q9BQD1 86 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 CST9LQ9H4G1 147 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 CDKN2A-AS1Q9UH64 79 aa1.99□□□□□ -2.09
UBE3D-205ENST00000503942 IGHV3-64A0A075B6Q5 118 aa1.98□□□□□ -2.09
UBE3D-205ENST00000503942 GVQW2A0A096LPI5 108 aaPredicted RBP1.98□□□□□ -2.09
UBE3D-205ENST00000503942 IGHV1-58A0A0C4DH39 117 aa1.98□□□□□ -2.09
UBE3D-205ENST00000503942 K7ERS5 55 aa1.98□□□□□ -2.09
UBE3D-205ENST00000503942 M0QXV9 152 aa1.98□□□□□ -2.09
UBE3D-205ENST00000503942 SMR3BP02814 79 aaPredicted RBP1.98□□□□□ -2.09
UBE3D-205ENST00000503942 SPAG11BQ08648 103 aa1.98□□□□□ -2.09
UBE3D-205ENST00000503942 SMAGPQ0VAQ4 97 aa1.98□□□□□ -2.09
UBE3D-205ENST00000503942 C9orf116Q5BN46 136 aaPredicted RBP1.98□□□□□ -2.09
UBE3D-205ENST00000503942 C2orf82Q6UX34 121 aa1.98□□□□□ -2.09
UBE3D-205ENST00000503942 UNQ6190/PRO20217Q6UXQ8 127 aa1.98□□□□□ -2.09
UBE3D-205ENST00000503942 SDIM1Q6ZPB5 146 aa1.98□□□□□ -2.09
UBE3D-205ENST00000503942 C3orf22Q8N5N4 141 aa1.98□□□□□ -2.09
UBE3D-205ENST00000503942 C9orf163Q8N9P6 203 aa1.98□□□□□ -2.09
UBE3D-205ENST00000503942 IFI27L1Q96BM0 104 aa1.98□□□□□ -2.09
UBE3D-205ENST00000503942 C2orf88Q9BSF0 95 aa1.98□□□□□ -2.09
UBE3D-205ENST00000503942 MRPL35Q9NZE8 188 aaKnown RBP1.98□□□□□ -2.09
UBE3D-205ENST00000503942 PKHD1L1Q86WI1 4243 aa1.97□□□□□ -2.09
UBE3D-205ENST00000503942 A0A096LNI7 61 aa1.97□□□□□ -2.09
UBE3D-205ENST00000503942 A0A0B4J2C4 111 aa1.97□□□□□ -2.09
UBE3D-205ENST00000503942 TINCRA0A1B0GVN0 87 aa1.97□□□□□ -2.09
UBE3D-205ENST00000503942 LEPROTL1O95214 131 aa1.97□□□□□ -2.09
UBE3D-205ENST00000503942 SCGB1C2P0DMR2 95 aa1.97□□□□□ -2.09
UBE3D-205ENST00000503942 IGLC3P0DOY3 106 aa1.97□□□□□ -2.09
UBE3D-205ENST00000503942 ZNF22P17026 224 aaPredicted RBP1.97□□□□□ -2.09
UBE3D-205ENST00000503942 CNBPP62633 177 aaKnown RBP1.97□□□□□ -2.09
UBE3D-205ENST00000503942 Q6ZSA8 131 aa1.97□□□□□ -2.09
UBE3D-205ENST00000503942 FAM19A3Q7Z5A8 133 aa1.97□□□□□ -2.09
UBE3D-205ENST00000503942 ANAPC13Q9BS18 74 aa1.97□□□□□ -2.09
UBE3D-205ENST00000503942 TOMM7Q9P0U1 55 aa1.97□□□□□ -2.09
UBE3D-205ENST00000503942 C6orf48Q9UBA6 75 aa1.97□□□□□ -2.09
UBE3D-205ENST00000503942 ABCA13Q86UQ4 5058 aa1.96□□□□□ -2.1
UBE3D-205ENST00000503942 TRAV12-1A0A0B4J245 112 aa1.96□□□□□ -2.1
UBE3D-205ENST00000503942 APOMO95445 188 aa1.96□□□□□ -2.1
UBE3D-205ENST00000503942 C3orf79P0CE67 100 aa1.96□□□□□ -2.1
UBE3D-205ENST00000503942 G0S2P27469 103 aa1.96□□□□□ -2.1
UBE3D-205ENST00000503942 TSPEAR-AS2P59090 65 aa1.96□□□□□ -2.1
UBE3D-205ENST00000503942 HERVK_113P63121 156 aa1.96□□□□□ -2.1
UBE3D-205ENST00000503942 TMEM170BQ5T4T1 132 aa1.96□□□□□ -2.1
UBE3D-205ENST00000503942 SCXQ7RTU7 201 aa1.96□□□□□ -2.1
UBE3D-205ENST00000503942 ZNF625Q96I27 306 aaPredicted RBP1.96□□□□□ -2.1
UBE3D-205ENST00000503942 CARD19Q96LW7 228 aa1.96□□□□□ -2.1
UBE3D-205ENST00000503942 FLG2Q5D862 2391 aaPredicted RBP1.96□□□□□ -2.1
UBE3D-205ENST00000503942 SRRM2Q9UQ35 2752 aaKnown RBP1.96□□□□□ -2.1
UBE3D-205ENST00000503942 LRP1Q07954 4544 aaKnown RBP1.96□□□□□ -2.1
UBE3D-205ENST00000503942 FAT3Q8TDW7 4589 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 LINC01549A6NIU2 74 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 F8VRH5 84 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 SYS1-DBNDD2H3BUS1 97 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 NDUFA1O15239 70 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 SEC11AP67812 179 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 CD164Q04900 197 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 ATOH7Q8N100 152 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 HIST3H2BBQ8N257 126 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 OR10D4PQ8NGN7 298 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 SPACA4Q8TDM5 124 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 COX7B2Q8TF08 81 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 PACRGQ96M98 296 aaPredicted RBP1.95□□□□□ -2.1
UBE3D-205ENST00000503942 HIST1H2BLQ99880 126 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 HSPB8Q9UJY1 196 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 MYCBP2O75592 4640 aa1.95□□□□□ -2.1
UBE3D-205ENST00000503942 IGKV2D-26A0A0A0MRZ7 120 aa1.94□□□□□ -2.1
UBE3D-205ENST00000503942 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.94□□□□□ -2.1
UBE3D-205ENST00000503942 LOC107984640A0A0U1RRK4 108 aa1.94□□□□□ -2.1
UBE3D-205ENST00000503942 DPM2O94777 84 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms