RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 PRO1933Q9H354 126 aa8.17□□□□□ -1.1
PDLIM7-210ENST00000503827 MYMXA0A1B0GTQ4 84 aa8.16□□□□□ -1.1
PDLIM7-210ENST00000503827 LINC00846Q9NV44 126 aa8.16□□□□□ -1.1
PDLIM7-210ENST00000503827 C20orf202A1L168 122 aa8.15□□□□□ -1.1
PDLIM7-210ENST00000503827 MIEN1Q9BRT3 115 aa8.15□□□□□ -1.1
PDLIM7-210ENST00000503827 hCG_2014768A0A024R1R8 64 aa8.14□□□□□ -1.11
PDLIM7-210ENST00000503827 LINC00614P0C842 121 aa8.14□□□□□ -1.11
PDLIM7-210ENST00000503827 FABP9Q0Z7S8 132 aa8.14□□□□□ -1.11
PDLIM7-210ENST00000503827 PMCHL1Q16048 86 aa8.14□□□□□ -1.11
PDLIM7-210ENST00000503827 ATP11AUNQ6ZP68 121 aa8.14□□□□□ -1.11
PDLIM7-210ENST00000503827 SMIM29Q86T20 159 aa8.14□□□□□ -1.11
PDLIM7-210ENST00000503827 NDUFC2O95298 119 aa8.13□□□□□ -1.11
PDLIM7-210ENST00000503827 MT2AP02795 61 aa8.13□□□□□ -1.11
PDLIM7-210ENST00000503827 Q1RN00 199 aa8.12□□□□□ -1.11
PDLIM7-210ENST00000503827 COX19Q49B96 90 aa8.12□□□□□ -1.11
PDLIM7-210ENST00000503827 COMMD7Q86VX2 200 aa8.12□□□□□ -1.11
PDLIM7-210ENST00000503827 URB1-AS1Q96HZ7 61 aa8.12□□□□□ -1.11
PDLIM7-210ENST00000503827 DHRS4-AS1Q9P1J3 65 aa8.11□□□□□ -1.11
PDLIM7-210ENST00000503827 CBY1Q9Y3M2 126 aa8.11□□□□□ -1.11
PDLIM7-210ENST00000503827 S100PP25815 95 aa8.1□□□□□ -1.11
PDLIM7-210ENST00000503827 AKR1D1P51857 326 aa8.1□□□□□ -1.11
PDLIM7-210ENST00000503827 TRAV12-1A0A0B4J245 112 aa8.09□□□□□ -1.11
PDLIM7-210ENST00000503827 SEC11CQ9BY50 192 aa8.09□□□□□ -1.11
PDLIM7-210ENST00000503827 TAL2Q16559 108 aa8.08□□□□□ -1.12
PDLIM7-210ENST00000503827 C18orf32Q8TCD1 76 aa8.07□□□□□ -1.12
PDLIM7-210ENST00000503827 KRTAP9-3Q9BYQ3 159 aa8.07□□□□□ -1.12
PDLIM7-210ENST00000503827 MT1FP04733 61 aa8.06□□□□□ -1.12
PDLIM7-210ENST00000503827 IFITM2Q01629 132 aa8.06□□□□□ -1.12
PDLIM7-210ENST00000503827 C10orf91Q5T1B1 145 aa8.06□□□□□ -1.12
PDLIM7-210ENST00000503827 DEFB105AQ8NG35 78 aa8.06□□□□□ -1.12
PDLIM7-210ENST00000503827 TCL1BO95988 128 aa8.05□□□□□ -1.12
PDLIM7-210ENST00000503827 KRTAP6-3Q3LI67 103 aa8.05□□□□□ -1.12
PDLIM7-210ENST00000503827 Q75L30 129 aa8.05□□□□□ -1.12
PDLIM7-210ENST00000503827 TRBV20-1A0A075B6N2 111 aa8.04□□□□□ -1.12
PDLIM7-210ENST00000503827 TEX49A0A1B0GTD5 131 aa8.04□□□□□ -1.12
PDLIM7-210ENST00000503827 KRTAP10-10P60014 251 aa8.04□□□□□ -1.12
PDLIM7-210ENST00000503827 RPS10P5Q9NQ39 176 aa8.04□□□□□ -1.12
PDLIM7-210ENST00000503827 TSPEAR-AS2P59090 65 aa8.03□□□□□ -1.12
PDLIM7-210ENST00000503827 IFI27L1Q96BM0 104 aa8.03□□□□□ -1.12
PDLIM7-210ENST00000503827 A0A0G2JQZ4 141 aa8.02□□□□□ -1.13
PDLIM7-210ENST00000503827 PCP2Q8IVA1 136 aa8.02□□□□□ -1.13
PDLIM7-210ENST00000503827 LEPROTO15243 131 aa8.01□□□□□ -1.13
PDLIM7-210ENST00000503827 NPC2P61916 151 aa8.01□□□□□ -1.13
PDLIM7-210ENST00000503827 RHEBQ15382 184 aa8.01□□□□□ -1.13
PDLIM7-210ENST00000503827 KRTAP19-6Q3LI70 58 aa8.01□□□□□ -1.13
PDLIM7-210ENST00000503827 SOSTDC1Q6X4U4 206 aa8□□□□□ -1.13
PDLIM7-210ENST00000503827 OR13C6PQ8NH95 151 aa8□□□□□ -1.13
PDLIM7-210ENST00000503827 OBSCN-AS1Q96MR7 158 aa7.99□□□□□ -1.13
PDLIM7-210ENST00000503827 COX7BP24311 80 aa7.98□□□□□ -1.13
PDLIM7-210ENST00000503827 ELOF1P60002 83 aaKnown RBP7.98□□□□□ -1.13
PDLIM7-210ENST00000503827 J3QQQ9 107 aa7.97□□□□□ -1.13
PDLIM7-210ENST00000503827 EIF4EBP3O60516 100 aaPredicted RBP7.97□□□□□ -1.13
PDLIM7-210ENST00000503827 NMUP48645 174 aa7.97□□□□□ -1.13
PDLIM7-210ENST00000503827 TRAPPC1Q9Y5R8 145 aa7.97□□□□□ -1.13
PDLIM7-210ENST00000503827 LGALS3P17931 250 aaKnown RBP7.95□□□□□ -1.14
PDLIM7-210ENST00000503827 C6orf99Q4VX62 202 aa7.93□□□□□ -1.14
PDLIM7-210ENST00000503827 ADAMTSL4-AS1Q5T5F5 129 aa7.93□□□□□ -1.14
PDLIM7-210ENST00000503827 SPANXCQ9NY87 97 aa7.93□□□□□ -1.14
PDLIM7-210ENST00000503827 FAM236DA0A1B0GTK5 79 aa7.92□□□□□ -1.14
PDLIM7-210ENST00000503827 H0Y8G0 127 aa7.92□□□□□ -1.14
PDLIM7-210ENST00000503827 FAM236CP0DP71 79 aa7.92□□□□□ -1.14
PDLIM7-210ENST00000503827 HERVK_113P61574 105 aa7.92□□□□□ -1.14
PDLIM7-210ENST00000503827 IGLV5-48A0A075B6I7 105 aa7.91□□□□□ -1.14
PDLIM7-210ENST00000503827 CHCHD1Q96BP2 118 aaKnown RBP7.91□□□□□ -1.14
PDLIM7-210ENST00000503827 SPANXDQ9BXN6 97 aa7.91□□□□□ -1.14
PDLIM7-210ENST00000503827 Q96NJ1 140 aa7.9□□□□□ -1.14
PDLIM7-210ENST00000503827 C20orf166-AS1Q96NR2 134 aa7.9□□□□□ -1.14
PDLIM7-210ENST00000503827 A0A0J9YXY3 114 aa7.89□□□□□ -1.15
PDLIM7-210ENST00000503827 TMEM218A2RU14 115 aa7.89□□□□□ -1.15
PDLIM7-210ENST00000503827 PLNP26678 52 aa7.88□□□□□ -1.15
PDLIM7-210ENST00000503827 LINC00308Q8TCZ7 52 aa7.87□□□□□ -1.15
PDLIM7-210ENST00000503827 TRBV7-6A0A0J9YX20 115 aa7.86□□□□□ -1.15
PDLIM7-210ENST00000503827 UQCC3Q6UW78 93 aa7.85□□□□□ -1.15
PDLIM7-210ENST00000503827 IGFL1Q6UW32 110 aa7.84□□□□□ -1.15
PDLIM7-210ENST00000503827 A0A1B0GWB2 263 aa7.83□□□□□ -1.16
PDLIM7-210ENST00000503827 F8WEM9 126 aa7.83□□□□□ -1.16
PDLIM7-210ENST00000503827 HSBP1O75506 76 aa7.83□□□□□ -1.16
PDLIM7-210ENST00000503827 DPM2O94777 84 aa7.83□□□□□ -1.16
PDLIM7-210ENST00000503827 LINC00518Q8N0U6 118 aa7.83□□□□□ -1.16
PDLIM7-210ENST00000503827 NEBP20929 6669 aa7.83□□□□□ -1.16
PDLIM7-210ENST00000503827 TRBV7-7A0A0K0K1E9 115 aa7.82□□□□□ -1.16
PDLIM7-210ENST00000503827 A8MUU9 505 aa7.82□□□□□ -1.16
PDLIM7-210ENST00000503827 RBM12B-AS1Q9P1G2 102 aa7.81□□□□□ -1.16
PDLIM7-210ENST00000503827 IGKCP01834 107 aa7.8□□□□□ -1.16
PDLIM7-210ENST00000503827 LEPROTL1O95214 131 aa7.79□□□□□ -1.16
PDLIM7-210ENST00000503827 CLLU1Q5K131 121 aa7.79□□□□□ -1.16
PDLIM7-210ENST00000503827 LITAFQ99732 161 aa7.79□□□□□ -1.16
PDLIM7-210ENST00000503827 PMCHL2Q9BQD1 86 aa7.78□□□□□ -1.16
PDLIM7-210ENST00000503827 NHP2Q9NX24 153 aaKnown RBP7.78□□□□□ -1.16
PDLIM7-210ENST00000503827 TIMM17BO60830 172 aa7.77□□□□□ -1.17
PDLIM7-210ENST00000503827 KRTAP20-1Q3LI63 56 aa7.77□□□□□ -1.17
PDLIM7-210ENST00000503827 Q6JHZ5 121 aa7.77□□□□□ -1.17
PDLIM7-210ENST00000503827 CLEC2BQ92478 149 aa7.77□□□□□ -1.17
PDLIM7-210ENST00000503827 A4D1N5 150 aa7.76□□□□□ -1.17
PDLIM7-210ENST00000503827 E9PLD3 99 aa7.76□□□□□ -1.17
PDLIM7-210ENST00000503827 LST1O00453 97 aa7.76□□□□□ -1.17
PDLIM7-210ENST00000503827 MPLKIPQ8TAP9 179 aa7.73□□□□□ -1.17
PDLIM7-210ENST00000503827 HSPB8Q9UJY1 196 aa7.72□□□□□ -1.17
PDLIM7-210ENST00000503827 TRAV13-2A0A0B4J235 113 aa7.71□□□□□ -1.18
PDLIM7-210ENST00000503827 ZNF815PA8K554 130 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms