RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 PRR34Q9NV39 138 aa10.76□□□□□ -0.69
HMGXB3-202ENST00000503427 BAHCC1Q9P281 2608 aa10.75□□□□□ -0.69
HMGXB3-202ENST00000503427 RPL37AP61513 92 aaKnown RBP10.75□□□□□ -0.69
HMGXB3-202ENST00000503427 C5orf42Q9H799 3197 aa10.74□□□□□ -0.69
HMGXB3-202ENST00000503427 IGLV1-50A0A075B6I6 118 aa10.74□□□□□ -0.69
HMGXB3-202ENST00000503427 SPAG11AQ6PDA7 123 aa10.74□□□□□ -0.69
HMGXB3-202ENST00000503427 SERTAD4-AS1Q5TG53 156 aa10.73□□□□□ -0.69
HMGXB3-202ENST00000503427 FLNAP21333 2647 aaKnown RBP10.73□□□□□ -0.69
HMGXB3-202ENST00000503427 A8MWP4 228 aa10.72□□□□□ -0.69
HMGXB3-202ENST00000503427 FAM168BA1KXE4 195 aa10.72□□□□□ -0.69
HMGXB3-202ENST00000503427 TEP1Q99973 2627 aaKnown RBP10.72□□□□□ -0.69
HMGXB3-202ENST00000503427 K7EQZ3 153 aa10.71□□□□□ -0.69
HMGXB3-202ENST00000503427 ITPR3Q14573 2671 aa10.71□□□□□ -0.69
HMGXB3-202ENST00000503427 LAMA3Q16787 3333 aa10.71□□□□□ -0.69
HMGXB3-202ENST00000503427 TRANK1O15050 2925 aa10.71□□□□□ -0.7
HMGXB3-202ENST00000503427 CHTF8P0CG12 524 aa10.7□□□□□ -0.7
HMGXB3-202ENST00000503427 LINC00313P59037 77 aa10.7□□□□□ -0.7
HMGXB3-202ENST00000503427 KLKP1Q107X0 134 aa10.68□□□□□ -0.7
HMGXB3-202ENST00000503427 LOC101927531A0A1B0GV80 90 aa10.67□□□□□ -0.7
HMGXB3-202ENST00000503427 MKI67P46013 3256 aaKnown RBP10.67□□□□□ -0.7
HMGXB3-202ENST00000503427 C15orf56Q8N910 161 aa10.66□□□□□ -0.7
HMGXB3-202ENST00000503427 ZNF292O60281 2723 aa10.66□□□□□ -0.7
HMGXB3-202ENST00000503427 C8orf87E5RJ46 101 aa10.63□□□□□ -0.71
HMGXB3-202ENST00000503427 IGFL1Q6UW32 110 aa10.63□□□□□ -0.71
HMGXB3-202ENST00000503427 Q8N377 158 aa10.63□□□□□ -0.71
HMGXB3-202ENST00000503427 MRPL34Q9BQ48 92 aaKnown RBP10.63□□□□□ -0.71
HMGXB3-202ENST00000503427 C9orf129Q5T035 196 aaKnown RBP10.61□□□□□ -0.71
HMGXB3-202ENST00000503427 FAM229AH3BQW9 127 aa10.6□□□□□ -0.71
HMGXB3-202ENST00000503427 TYMSOSQ8TAI1 123 aa10.6□□□□□ -0.71
HMGXB3-202ENST00000503427 TLX1NBP0CAT3 122 aa10.6□□□□□ -0.71
HMGXB3-202ENST00000503427 PLA2G2DQ9UNK4 145 aa10.6□□□□□ -0.71
HMGXB3-202ENST00000503427 PRR15Q8IV56 129 aa10.59□□□□□ -0.71
HMGXB3-202ENST00000503427 ATP11AUNQ6ZP68 121 aa10.58□□□□□ -0.72
HMGXB3-202ENST00000503427 COA5Q86WW8 74 aa10.57□□□□□ -0.72
HMGXB3-202ENST00000503427 ZNF575Q86XF7 245 aa10.57□□□□□ -0.72
HMGXB3-202ENST00000503427 CYP4F30PQ9H0H9 118 aa10.57□□□□□ -0.72
HMGXB3-202ENST00000503427 H7BZZ5 65 aa10.56□□□□□ -0.72
HMGXB3-202ENST00000503427 BRCA2P51587 3418 aa10.56□□□□□ -0.72
HMGXB3-202ENST00000503427 A8MUN3 132 aa10.56□□□□□ -0.72
HMGXB3-202ENST00000503427 BPTFQ12830 3046 aa10.55□□□□□ -0.72
HMGXB3-202ENST00000503427 LINC01600Q96MT4 127 aa10.54□□□□□ -0.72
HMGXB3-202ENST00000503427 C8orf17Q9NRJ1 99 aa10.53□□□□□ -0.72
HMGXB3-202ENST00000503427 Q96NJ1 140 aa10.52□□□□□ -0.73
HMGXB3-202ENST00000503427 C9orf163Q8N9P6 203 aa10.51□□□□□ -0.73
HMGXB3-202ENST00000503427 PRUNE2Q8WUY3 3088 aa10.5□□□□□ -0.73
HMGXB3-202ENST00000503427 OBSCN-AS1Q96MR7 158 aa10.49□□□□□ -0.73
HMGXB3-202ENST00000503427 A0A087WTM6 91 aa10.49□□□□□ -0.73
HMGXB3-202ENST00000503427 A0A1B0GVX0 72 aa10.48□□□□□ -0.73
HMGXB3-202ENST00000503427 APLNQ9ULZ1 77 aa10.48□□□□□ -0.73
HMGXB3-202ENST00000503427 SSBP3-AS1Q7Z2R9 100 aa10.47□□□□□ -0.73
HMGXB3-202ENST00000503427 ZNF861PO60384 105 aa10.47□□□□□ -0.73
HMGXB3-202ENST00000503427 IGLV8-61A0A075B6I0 122 aa10.46□□□□□ -0.74
HMGXB3-202ENST00000503427 WIPF1O43516 503 aa10.46□□□□□ -0.74
HMGXB3-202ENST00000503427 A0A1W2PNM2 257 aa10.45□□□□□ -0.74
HMGXB3-202ENST00000503427 PLA2G1BP04054 148 aaKnown RBP10.45□□□□□ -0.74
HMGXB3-202ENST00000503427 STAB1Q9NY15 2570 aa10.45□□□□□ -0.74
HMGXB3-202ENST00000503427 A0A0G2JQZ4 141 aa10.44□□□□□ -0.74
HMGXB3-202ENST00000503427 A0A1W2PNN7 141 aa10.44□□□□□ -0.74
HMGXB3-202ENST00000503427 CNBPP62633 177 aaKnown RBP10.44□□□□□ -0.74
HMGXB3-202ENST00000503427 UQCR11O14957 56 aa10.42□□□□□ -0.74
HMGXB3-202ENST00000503427 IGLV5-48A0A075B6I7 105 aa10.42□□□□□ -0.74
HMGXB3-202ENST00000503427 LINC00336Q6ZUF6 198 aa10.42□□□□□ -0.74
HMGXB3-202ENST00000503427 DSCR10P59022 87 aa10.41□□□□□ -0.74
HMGXB3-202ENST00000503427 CHD6Q8TD26 2715 aa10.41□□□□□ -0.74
HMGXB3-202ENST00000503427 J3QL48 77 aa10.4□□□□□ -0.74
HMGXB3-202ENST00000503427 FAM104AQ969W3 186 aa10.4□□□□□ -0.74
HMGXB3-202ENST00000503427 DSPP15924 2871 aaKnown RBP10.4□□□□□ -0.74
HMGXB3-202ENST00000503427 MGAQ8IWI9 3026 aa10.4□□□□□ -0.74
HMGXB3-202ENST00000503427 CR1P17927 2039 aa10.39□□□□□ -0.75
HMGXB3-202ENST00000503427 IGLV5-37A0A075B6J1 123 aa10.39□□□□□ -0.75
HMGXB3-202ENST00000503427 COL6A5A8TX70 2615 aa10.38□□□□□ -0.75
HMGXB3-202ENST00000503427 CASC10Q5T4H9 136 aa10.37□□□□□ -0.75
HMGXB3-202ENST00000503427 SPANXA2-OT1Q8N9U9 137 aa10.36□□□□□ -0.75
HMGXB3-202ENST00000503427 IGSF10Q6WRI0 2623 aa10.36□□□□□ -0.75
HMGXB3-202ENST00000503427 UNC79Q9P2D8 2635 aa10.36□□□□□ -0.75
HMGXB3-202ENST00000503427 SPRR4Q96PI1 79 aa10.34□□□□□ -0.75
HMGXB3-202ENST00000503427 GCN1Q92616 2671 aaKnown RBP10.33□□□□□ -0.76
HMGXB3-202ENST00000503427 TEX15Q9BXT5 2789 aa10.31□□□□□ -0.76
HMGXB3-202ENST00000503427 LINC00304Q8N9R0 145 aa10.31□□□□□ -0.76
HMGXB3-202ENST00000503427 IGLV7-43P04211 117 aa10.31□□□□□ -0.76
HMGXB3-202ENST00000503427 MIR22HGQ0VDD5 57 aa10.31□□□□□ -0.76
HMGXB3-202ENST00000503427 PSORS1C2Q9UIG4 136 aa10.31□□□□□ -0.76
HMGXB3-202ENST00000503427 OCR1Q9BZK8 76 aa10.3□□□□□ -0.76
HMGXB3-202ENST00000503427 ANAPC11Q9NYG5 84 aa10.29□□□□□ -0.76
HMGXB3-202ENST00000503427 WDFY4Q6ZS81 3184 aa10.29□□□□□ -0.76
HMGXB3-202ENST00000503427 AKAP13Q12802 2813 aa10.25□□□□□ -0.77
HMGXB3-202ENST00000503427 TRIOO75962 3097 aa10.22□□□□□ -0.77
HMGXB3-202ENST00000503427 CFAP54Q96N23 3096 aa10.21□□□□□ -0.77
HMGXB3-202ENST00000503427 SPINT4Q6UDR6 99 aa10.2□□□□□ -0.78
HMGXB3-202ENST00000503427 CD164Q04900 197 aa10.2□□□□□ -0.78
HMGXB3-202ENST00000503427 KTN1-AS1Q86SY8 53 aa10.19□□□□□ -0.78
HMGXB3-202ENST00000503427 SMR3BP02814 79 aaPredicted RBP10.17□□□□□ -0.78
HMGXB3-202ENST00000503427 C9orf92A6NGG3 77 aa10.17□□□□□ -0.78
HMGXB3-202ENST00000503427 Q1T7F1 81 aa10.17□□□□□ -0.78
HMGXB3-202ENST00000503427 LAMA2P24043 3122 aaKnown RBP10.16□□□□□ -0.78
HMGXB3-202ENST00000503427 CDC42SE1Q9NRR8 79 aa10.16□□□□□ -0.78
HMGXB3-202ENST00000503427 TNP2Q05952 138 aa10.14□□□□□ -0.79
HMGXB3-202ENST00000503427 XIRP2A4UGR9 3374 aa10.13□□□□□ -0.79
HMGXB3-202ENST00000503427 NBEAL1Q6ZS30 2694 aa10.13□□□□□ -0.79
HMGXB3-202ENST00000503427 UNC80Q8N2C7 3258 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms