RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 KRTAP10-11P60412 298 aa4.31□□□□□ -1.72
LINC00939-201ENST00000502479 LIMD2Q9BT23 127 aa4.31□□□□□ -1.72
LINC00939-201ENST00000502479 CSPG4Q6UVK1 2322 aa4.3□□□□□ -1.72
LINC00939-201ENST00000502479 ERC2-IT1O76042 136 aa4.3□□□□□ -1.72
LINC00939-201ENST00000502479 C15orf56Q8N910 161 aa4.3□□□□□ -1.72
LINC00939-201ENST00000502479 CEP295Q9C0D2 2601 aa4.3□□□□□ -1.72
LINC00939-201ENST00000502479 SPINK1P00995 79 aa4.3□□□□□ -1.72
LINC00939-201ENST00000502479 PRR3P79522 188 aaKnown RBP4.3□□□□□ -1.72
LINC00939-201ENST00000502479 TMEM254Q8TBM7 123 aa4.3□□□□□ -1.72
LINC00939-201ENST00000502479 C10orf25Q5T742 122 aa4.3□□□□□ -1.72
LINC00939-201ENST00000502479 REG3GQ6UW15 175 aa4.3□□□□□ -1.72
LINC00939-201ENST00000502479 LINC01547P58512 204 aaPredicted RBP4.29□□□□□ -1.72
LINC00939-201ENST00000502479 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
LINC00939-201ENST00000502479 HIVEP3Q5T1R4 2406 aa4.29□□□□□ -1.72
LINC00939-201ENST00000502479 PTPN13Q12923 2485 aa4.29□□□□□ -1.72
LINC00939-201ENST00000502479 HIVEP2P31629 2446 aa4.29□□□□□ -1.72
LINC00939-201ENST00000502479 C22orf24Q9Y442 160 aa4.29□□□□□ -1.72
LINC00939-201ENST00000502479 FLNCQ14315 2725 aa4.29□□□□□ -1.72
LINC00939-201ENST00000502479 TRBV7-4A0A0J9YYF1 115 aa4.29□□□□□ -1.72
LINC00939-201ENST00000502479 NUPR2A6NF83 97 aa4.28□□□□□ -1.72
LINC00939-201ENST00000502479 PCOTHQ58A44 107 aa4.28□□□□□ -1.72
LINC00939-201ENST00000502479 LINC00528Q8N1L1 170 aa4.28□□□□□ -1.72
LINC00939-201ENST00000502479 TM2D3Q9BRN9 247 aa4.28□□□□□ -1.72
LINC00939-201ENST00000502479 Q8N3U1 123 aa4.28□□□□□ -1.72
LINC00939-201ENST00000502479 COL12A1Q99715 3063 aa4.28□□□□□ -1.72
LINC00939-201ENST00000502479 NCOR2Q9Y618 2525 aa4.28□□□□□ -1.72
LINC00939-201ENST00000502479 hDV103S1A0JD37 113 aa4.27□□□□□ -1.73
LINC00939-201ENST00000502479 Q6ZRX8 168 aa4.27□□□□□ -1.73
LINC00939-201ENST00000502479 C8orf87E5RJ46 101 aa4.27□□□□□ -1.73
LINC00939-201ENST00000502479 KRTAP24-1Q3LI83 254 aa4.27□□□□□ -1.73
LINC00939-201ENST00000502479 AGRNO00468 2067 aa4.27□□□□□ -1.73
LINC00939-201ENST00000502479 A0A087WVE0 104 aa4.27□□□□□ -1.73
LINC00939-201ENST00000502479 IGLV1-50A0A075B6I6 118 aa4.26□□□□□ -1.73
LINC00939-201ENST00000502479 IGLV9-49A0A0B4J1Y8 123 aa4.26□□□□□ -1.73
LINC00939-201ENST00000502479 IGF2RP11717 2491 aa4.26□□□□□ -1.73
LINC00939-201ENST00000502479 MXRA5Q9NR99 2828 aa4.26□□□□□ -1.73
LINC00939-201ENST00000502479 KRTAP26-1Q6PEX3 210 aa4.26□□□□□ -1.73
LINC00939-201ENST00000502479 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.26□□□□□ -1.73
LINC00939-201ENST00000502479 A0A1B0GU69 56 aa4.26□□□□□ -1.73
LINC00939-201ENST00000502479 H0Y9P7 68 aa4.26□□□□□ -1.73
LINC00939-201ENST00000502479 CHD8Q9HCK8 2581 aa4.25□□□□□ -1.73
LINC00939-201ENST00000502479 Q6ZRP5 223 aa4.25□□□□□ -1.73
LINC00939-201ENST00000502479 C1orf137Q5JT78 98 aa4.25□□□□□ -1.73
LINC00939-201ENST00000502479 LINC00588Q9Y4M8 146 aa4.25□□□□□ -1.73
LINC00939-201ENST00000502479 C16orf90A8MZG2 172 aa4.25□□□□□ -1.73
LINC00939-201ENST00000502479 DNAH1Q9P2D7 4330 aa4.24□□□□□ -1.73
LINC00939-201ENST00000502479 IGHV6-1A0A0B4J1U7 121 aa4.24□□□□□ -1.73
LINC00939-201ENST00000502479 CNBPP62633 177 aaKnown RBP4.24□□□□□ -1.73
LINC00939-201ENST00000502479 C9orf129Q5T035 196 aaKnown RBP4.24□□□□□ -1.73
LINC00939-201ENST00000502479 APCP25054 2843 aa4.24□□□□□ -1.73
LINC00939-201ENST00000502479 ATP11AUNQ6ZP68 121 aa4.24□□□□□ -1.73
LINC00939-201ENST00000502479 TLN1Q9Y490 2541 aaKnown RBP4.23□□□□□ -1.73
LINC00939-201ENST00000502479 PKD1L2Q7Z442 2459 aa4.23□□□□□ -1.73
LINC00939-201ENST00000502479 MYO9AB2RTY4 2548 aa4.23□□□□□ -1.73
LINC00939-201ENST00000502479 DYNC2H1Q8NCM8 4307 aaKnown RBP4.22□□□□□ -1.73
LINC00939-201ENST00000502479 FN1P02751 2386 aaKnown RBP4.22□□□□□ -1.73
LINC00939-201ENST00000502479 IGLV5-48A0A075B6I7 105 aa4.22□□□□□ -1.73
LINC00939-201ENST00000502479 RETNLBQ9BQ08 111 aa4.22□□□□□ -1.73
LINC00939-201ENST00000502479 PRLHP81277 87 aa4.21□□□□□ -1.74
LINC00939-201ENST00000502479 SPRR1AP35321 89 aa4.21□□□□□ -1.74
LINC00939-201ENST00000502479 RPL37AP61513 92 aaKnown RBP4.21□□□□□ -1.74
LINC00939-201ENST00000502479 C1orf64Q8NEQ6 169 aa4.21□□□□□ -1.74
LINC00939-201ENST00000502479 Q8NBF4 154 aa4.2□□□□□ -1.74
LINC00939-201ENST00000502479 KLKP1Q107X0 134 aa4.2□□□□□ -1.74
LINC00939-201ENST00000502479 CIRBP-AS1Q8TBR5 109 aa4.2□□□□□ -1.74
LINC00939-201ENST00000502479 A0A087WSZ3 146 aa4.2□□□□□ -1.74
LINC00939-201ENST00000502479 HCG22E2RYF7 251 aa4.2□□□□□ -1.74
LINC00939-201ENST00000502479 H3BPC8 53 aa4.2□□□□□ -1.74
LINC00939-201ENST00000502479 ACYP2P14621 99 aa4.2□□□□□ -1.74
LINC00939-201ENST00000502479 OTOGQ6ZRI0 2925 aa4.19□□□□□ -1.74
LINC00939-201ENST00000502479 SSBP3-AS1Q7Z2R9 100 aa4.19□□□□□ -1.74
LINC00939-201ENST00000502479 Q8NDZ9 215 aa4.19□□□□□ -1.74
LINC00939-201ENST00000502479 TRRAPQ9Y4A5 3859 aa4.18□□□□□ -1.74
LINC00939-201ENST00000502479 IGKV2D-30A0A075B6S6 120 aa4.17□□□□□ -1.74
LINC00939-201ENST00000502479 K7EIL1 84 aa4.17□□□□□ -1.74
LINC00939-201ENST00000502479 IGKV2-30P06310 120 aa4.17□□□□□ -1.74
LINC00939-201ENST00000502479 SPRR4Q96PI1 79 aa4.17□□□□□ -1.74
LINC00939-201ENST00000502479 USP9XQ93008 2570 aaPredicted RBP4.17□□□□□ -1.74
LINC00939-201ENST00000502479 ZANQ9Y493 2812 aa4.17□□□□□ -1.74
LINC00939-201ENST00000502479 Q8N377 158 aa4.17□□□□□ -1.74
LINC00939-201ENST00000502479 C7orf65Q6ZTY9 151 aa4.17□□□□□ -1.74
LINC00939-201ENST00000502479 APLNQ9ULZ1 77 aa4.17□□□□□ -1.74
LINC00939-201ENST00000502479 IGLV8-61A0A075B6I0 122 aa4.17□□□□□ -1.74
LINC00939-201ENST00000502479 C4orf26Q17RF5 130 aa4.17□□□□□ -1.74
LINC00939-201ENST00000502479 MDFIQ99750 246 aa4.17□□□□□ -1.74
LINC00939-201ENST00000502479 Q9BRP9 147 aa4.16□□□□□ -1.74
LINC00939-201ENST00000502479 TLN2Q9Y4G6 2542 aa4.16□□□□□ -1.74
LINC00939-201ENST00000502479 TP53AIP1Q9HCN2 124 aa4.16□□□□□ -1.74
LINC00939-201ENST00000502479 CRIPTQ9P021 101 aa4.16□□□□□ -1.74
LINC00939-201ENST00000502479 CD164Q04900 197 aa4.15□□□□□ -1.74
LINC00939-201ENST00000502479 NBDYA0A0U1RRE5 68 aa4.15□□□□□ -1.75
LINC00939-201ENST00000502479 LINC00476Q8WZB0 136 aa4.14□□□□□ -1.75
LINC00939-201ENST00000502479 KRTAP4-16G5E9R7 235 aaPredicted RBP4.14□□□□□ -1.75
LINC00939-201ENST00000502479 DEFB116Q30KQ4 102 aa4.14□□□□□ -1.75
LINC00939-201ENST00000502479 SPRR1BP22528 89 aa4.13□□□□□ -1.75
LINC00939-201ENST00000502479 ZFYVE26Q68DK2 2539 aa4.13□□□□□ -1.75
LINC00939-201ENST00000502479 M0R2N4 97 aa4.13□□□□□ -1.75
LINC00939-201ENST00000502479 TNP2Q05952 138 aa4.13□□□□□ -1.75
LINC00939-201ENST00000502479 DNAH7Q8WXX0 4024 aa4.12□□□□□ -1.75
LINC00939-201ENST00000502479 FAM168BA1KXE4 195 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms