RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 SCGB1D1O95968 90 aa4.08□□□□□ -1.76
SH3RF1-202ENST00000502315 ZNF22P17026 224 aaPredicted RBP4.08□□□□□ -1.76
SH3RF1-202ENST00000502315 SPRR1AP35321 89 aa4.08□□□□□ -1.76
SH3RF1-202ENST00000502315 HERV-K104P63124 156 aa4.08□□□□□ -1.76
SH3RF1-202ENST00000502315 PRLHP81277 87 aa4.08□□□□□ -1.76
SH3RF1-202ENST00000502315 ZNF625Q96I27 306 aaPredicted RBP4.08□□□□□ -1.76
SH3RF1-202ENST00000502315 KCNQ1DNQ9H478 68 aa4.08□□□□□ -1.76
SH3RF1-202ENST00000502315 TMEM238C9JI98 176 aa4.07□□□□□ -1.76
SH3RF1-202ENST00000502315 LINC00483Q53H64 154 aa4.07□□□□□ -1.76
SH3RF1-202ENST00000502315 RETNLBQ9BQ08 111 aa4.07□□□□□ -1.76
SH3RF1-202ENST00000502315 LOC107984156A0A0G2JMH3 177 aa4.06□□□□□ -1.76
SH3RF1-202ENST00000502315 H0Y8G0 127 aa4.06□□□□□ -1.76
SH3RF1-202ENST00000502315 SYS1-DBNDD2H3BUS1 97 aa4.06□□□□□ -1.76
SH3RF1-202ENST00000502315 LINC01547P58512 204 aaPredicted RBP4.06□□□□□ -1.76
SH3RF1-202ENST00000502315 KRTAP13-3Q3SY46 172 aa4.06□□□□□ -1.76
SH3RF1-202ENST00000502315 ARL17AQ8IVW1 177 aa4.06□□□□□ -1.76
SH3RF1-202ENST00000502315 ATOH7Q8N100 152 aa4.06□□□□□ -1.76
SH3RF1-202ENST00000502315 IFI27L1Q96BM0 104 aa4.06□□□□□ -1.76
SH3RF1-202ENST00000502315 PMCHL2Q9BQD1 86 aa4.06□□□□□ -1.76
SH3RF1-202ENST00000502315 HIGD2AQ9BW72 106 aa4.06□□□□□ -1.76
SH3RF1-202ENST00000502315 HSPB8Q9UJY1 196 aa4.06□□□□□ -1.76
SH3RF1-202ENST00000502315 TRAV12-1A0A0B4J245 112 aa4.05□□□□□ -1.76
SH3RF1-202ENST00000502315 PCP4L1A6NKN8 68 aa4.05□□□□□ -1.76
SH3RF1-202ENST00000502315 KRTAP4-16G5E9R7 235 aaPredicted RBP4.05□□□□□ -1.76
SH3RF1-202ENST00000502315 SLC25A20O43772 301 aa4.05□□□□□ -1.76
SH3RF1-202ENST00000502315 LINC00158P58513 81 aa4.05□□□□□ -1.76
SH3RF1-202ENST00000502315 TMEM170BQ5T4T1 132 aa4.05□□□□□ -1.76
SH3RF1-202ENST00000502315 PET117Q6UWS5 81 aa4.05□□□□□ -1.76
SH3RF1-202ENST00000502315 C3orf22Q8N5N4 141 aa4.05□□□□□ -1.76
SH3RF1-202ENST00000502315 DAND5Q8N907 189 aa4.05□□□□□ -1.76
SH3RF1-202ENST00000502315 MAP1LC3CQ9BXW4 147 aa4.05□□□□□ -1.76
SH3RF1-202ENST00000502315 PRO1933Q9H354 126 aa4.05□□□□□ -1.76
SH3RF1-202ENST00000502315 CBY1Q9Y3M2 126 aa4.05□□□□□ -1.76
SH3RF1-202ENST00000502315 TRBV10-2A0A0K0K1G8 114 aa4.04□□□□□ -1.76
SH3RF1-202ENST00000502315 LINC01545Q5VT33 79 aa4.04□□□□□ -1.76
SH3RF1-202ENST00000502315 TMEM238LA0A1B0GVL6 79 aa4.03□□□□□ -1.76
SH3RF1-202ENST00000502315 ETDCA0A1B0GVM5 59 aa4.03□□□□□ -1.76
SH3RF1-202ENST00000502315 TMEM223A0PJW6 202 aa4.03□□□□□ -1.76
SH3RF1-202ENST00000502315 C20orf202A1L168 122 aa4.03□□□□□ -1.76
SH3RF1-202ENST00000502315 C11orf86A6NJI1 115 aa4.03□□□□□ -1.76
SH3RF1-202ENST00000502315 Q8NBF4 154 aa4.03□□□□□ -1.76
SH3RF1-202ENST00000502315 SMCR5Q8TEV8 140 aa4.03□□□□□ -1.76
SH3RF1-202ENST00000502315 PAM16Q9Y3D7 125 aa4.03□□□□□ -1.76
SH3RF1-202ENST00000502315 CHTOPQ9Y3Y2 248 aaKnown RBP4.03□□□□□ -1.76
SH3RF1-202ENST00000502315 SPATA45Q537H7 98 aa4.02□□□□□ -1.77
SH3RF1-202ENST00000502315 BOD1L2Q8IYS8 172 aa4.02□□□□□ -1.77
SH3RF1-202ENST00000502315 Q8N377 158 aa4.02□□□□□ -1.77
SH3RF1-202ENST00000502315 Q8NDZ9 215 aa4.02□□□□□ -1.77
SH3RF1-202ENST00000502315 VAMP8Q9BV40 100 aa4.02□□□□□ -1.77
SH3RF1-202ENST00000502315 MYMXA0A1B0GTQ4 84 aa4.01□□□□□ -1.77
SH3RF1-202ENST00000502315 NDUFC2O95298 119 aa4.01□□□□□ -1.77
SH3RF1-202ENST00000502315 B5MCH6 92 aa4□□□□□ -1.77
SH3RF1-202ENST00000502315 NMUP48645 174 aa4□□□□□ -1.77
SH3RF1-202ENST00000502315 ANKRD39Q53RE8 183 aa4□□□□□ -1.77
SH3RF1-202ENST00000502315 MEIG1Q5JSS6 88 aa4□□□□□ -1.77
SH3RF1-202ENST00000502315 SLC25A34Q6PIV7 304 aa4□□□□□ -1.77
SH3RF1-202ENST00000502315 MIR7-3HGQ8N6C7 128 aa4□□□□□ -1.77
SH3RF1-202ENST00000502315 TSTD3H0UI37 97 aa3.99□□□□□ -1.77
SH3RF1-202ENST00000502315 DPM2O94777 84 aa3.99□□□□□ -1.77
SH3RF1-202ENST00000502315 IGKCP01834 107 aa3.99□□□□□ -1.77
SH3RF1-202ENST00000502315 SMIM13P0DJ93 91 aa3.99□□□□□ -1.77
SH3RF1-202ENST00000502315 Q6ZRX8 168 aa3.99□□□□□ -1.77
SH3RF1-202ENST00000502315 SPANXB1Q9NS25 103 aaPredicted RBP3.99□□□□□ -1.77
SH3RF1-202ENST00000502315 TRBV10-3A0A0K0K1G6 114 aa3.98□□□□□ -1.77
SH3RF1-202ENST00000502315 HSBP1L1C9JCN9 74 aa3.98□□□□□ -1.77
SH3RF1-202ENST00000502315 IGLV6-57P01721 117 aa3.98□□□□□ -1.77
SH3RF1-202ENST00000502315 CFC1BP0CG36 223 aa3.98□□□□□ -1.77
SH3RF1-202ENST00000502315 DDTP30046 118 aa3.98□□□□□ -1.77
SH3RF1-202ENST00000502315 HINT1P49773 126 aaPredicted RBP3.98□□□□□ -1.77
SH3RF1-202ENST00000502315 GAGE2AQ6NT46 116 aa3.98□□□□□ -1.77
SH3RF1-202ENST00000502315 C14orf144Q96I85 54 aa3.98□□□□□ -1.77
SH3RF1-202ENST00000502315 PLNP26678 52 aa3.97□□□□□ -1.77
SH3RF1-202ENST00000502315 MIEN1Q9BRT3 115 aa3.97□□□□□ -1.77
SH3RF1-202ENST00000502315 LIMD2Q9BT23 127 aa3.97□□□□□ -1.77
SH3RF1-202ENST00000502315 A0A0U1RRA0 63 aa3.96□□□□□ -1.78
SH3RF1-202ENST00000502315 NCR3O14931 201 aa3.96□□□□□ -1.78
SH3RF1-202ENST00000502315 LEPROTO15243 131 aa3.96□□□□□ -1.78
SH3RF1-202ENST00000502315 CD164Q04900 197 aa3.96□□□□□ -1.78
SH3RF1-202ENST00000502315 MOBPQ13875 183 aa3.96□□□□□ -1.78
SH3RF1-202ENST00000502315 S100A7L2Q5SY68 101 aa3.96□□□□□ -1.78
SH3RF1-202ENST00000502315 TTTY13Q9BZ97 58 aa3.96□□□□□ -1.78
SH3RF1-202ENST00000502315 UQCR10Q9UDW1 63 aa3.96□□□□□ -1.78
SH3RF1-202ENST00000502315 IGLV9-49A0A0B4J1Y8 123 aa3.95□□□□□ -1.78
SH3RF1-202ENST00000502315 COX8AP10176 69 aa3.95□□□□□ -1.78
SH3RF1-202ENST00000502315 SPRR1BP22528 89 aa3.95□□□□□ -1.78
SH3RF1-202ENST00000502315 HERVK_113P61574 105 aa3.95□□□□□ -1.78
SH3RF1-202ENST00000502315 PCP2Q8IVA1 136 aa3.95□□□□□ -1.78
SH3RF1-202ENST00000502315 Q9BRP9 147 aa3.95□□□□□ -1.78
SH3RF1-202ENST00000502315 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
SH3RF1-202ENST00000502315 TRAV23DV6A0A075B6W5 121 aa3.94□□□□□ -1.78
SH3RF1-202ENST00000502315 ZNF73O43830 326 aaPredicted RBP3.94□□□□□ -1.78
SH3RF1-202ENST00000502315 ERC2-IT1O76042 136 aa3.94□□□□□ -1.78
SH3RF1-202ENST00000502315 Q5XG85 94 aa3.94□□□□□ -1.78
SH3RF1-202ENST00000502315 C2orf91Q6ZV80 131 aa3.94□□□□□ -1.78
SH3RF1-202ENST00000502315 KRTAP4-1Q9BYQ7 146 aa3.94□□□□□ -1.78
SH3RF1-202ENST00000502315 DHRS4-AS1Q9P1J3 65 aa3.94□□□□□ -1.78
SH3RF1-202ENST00000502315 E9PLD3 99 aa3.93□□□□□ -1.78
SH3RF1-202ENST00000502315 J3QQQ9 107 aa3.93□□□□□ -1.78
SH3RF1-202ENST00000502315 TSPEAR-AS2P59090 65 aa3.93□□□□□ -1.78
SH3RF1-202ENST00000502315 LGALS3P17931 250 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms