RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 MYMXA0A1B0GTQ4 84 aa8.09□□□□□ -1.11
HDAC6-236ENST00000498808 SLC25A34Q6PIV7 304 aa8.09□□□□□ -1.11
HDAC6-236ENST00000498808 LAMTOR3Q9UHA4 124 aa8.09□□□□□ -1.11
HDAC6-236ENST00000498808 MACF1Q9UPN3 7388 aaKnown RBP8.09□□□□□ -1.11
HDAC6-236ENST00000498808 SYNE2Q8WXH0 6885 aaKnown RBP8.08□□□□□ -1.12
HDAC6-236ENST00000498808 COX19Q49B96 90 aa8.08□□□□□ -1.12
HDAC6-236ENST00000498808 TRAV12-1A0A0B4J245 112 aa8.07□□□□□ -1.12
HDAC6-236ENST00000498808 LCE2BO14633 110 aa8.07□□□□□ -1.12
HDAC6-236ENST00000498808 NDUFC2O95298 119 aa8.07□□□□□ -1.12
HDAC6-236ENST00000498808 TSPEAR-AS2P59090 65 aa8.07□□□□□ -1.12
HDAC6-236ENST00000498808 SEC11CQ9BY50 192 aa8.07□□□□□ -1.12
HDAC6-236ENST00000498808 RPS10P5Q9NQ39 176 aa8.07□□□□□ -1.12
HDAC6-236ENST00000498808 S100PP25815 95 aa8.06□□□□□ -1.12
HDAC6-236ENST00000498808 SMIM29Q86T20 159 aa8.05□□□□□ -1.12
HDAC6-236ENST00000498808 PRO1933Q9H354 126 aa8.05□□□□□ -1.12
HDAC6-236ENST00000498808 Q1RN00 199 aa8.04□□□□□ -1.12
HDAC6-236ENST00000498808 MIEN1Q9BRT3 115 aa8.04□□□□□ -1.12
HDAC6-236ENST00000498808 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-236ENST00000498808 MT2AP02795 61 aa8.03□□□□□ -1.12
HDAC6-236ENST00000498808 SOSTDC1Q6X4U4 206 aa8.03□□□□□ -1.12
HDAC6-236ENST00000498808 HINT1P49773 126 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-236ENST00000498808 IFI27L1Q96BM0 104 aa8.02□□□□□ -1.13
HDAC6-236ENST00000498808 A0A0G2JQZ4 141 aa8.01□□□□□ -1.13
HDAC6-236ENST00000498808 DHRS4-AS1Q9P1J3 65 aa8.01□□□□□ -1.13
HDAC6-236ENST00000498808 COMMD7Q86VX2 200 aa8□□□□□ -1.13
HDAC6-236ENST00000498808 NPC2P61916 151 aa7.99□□□□□ -1.13
HDAC6-236ENST00000498808 LEPROTO15243 131 aa7.98□□□□□ -1.13
HDAC6-236ENST00000498808 AKR1D1P51857 326 aa7.98□□□□□ -1.13
HDAC6-236ENST00000498808 MT1FP04733 61 aa7.97□□□□□ -1.13
HDAC6-236ENST00000498808 IFITM2Q01629 132 aa7.97□□□□□ -1.13
HDAC6-236ENST00000498808 TAL2Q16559 108 aa7.97□□□□□ -1.13
HDAC6-236ENST00000498808 DEFB105AQ8NG35 78 aa7.97□□□□□ -1.13
HDAC6-236ENST00000498808 TRAPPC1Q9Y5R8 145 aa7.97□□□□□ -1.13
HDAC6-236ENST00000498808 TMEM218A2RU14 115 aa7.96□□□□□ -1.14
HDAC6-236ENST00000498808 ATP11AUNQ6ZP68 121 aa7.96□□□□□ -1.14
HDAC6-236ENST00000498808 KRTAP9-3Q9BYQ3 159 aa7.96□□□□□ -1.14
HDAC6-236ENST00000498808 CBY1Q9Y3M2 126 aa7.96□□□□□ -1.14
HDAC6-236ENST00000498808 C20orf202A1L168 122 aa7.95□□□□□ -1.14
HDAC6-236ENST00000498808 J3QQQ9 107 aa7.95□□□□□ -1.14
HDAC6-236ENST00000498808 ADAMTSL4-AS1Q5T5F5 129 aa7.95□□□□□ -1.14
HDAC6-236ENST00000498808 TEX49A0A1B0GTD5 131 aa7.94□□□□□ -1.14
HDAC6-236ENST00000498808 ELOF1P60002 83 aaKnown RBP7.94□□□□□ -1.14
HDAC6-236ENST00000498808 Q75L30 129 aa7.94□□□□□ -1.14
HDAC6-236ENST00000498808 RHEBQ15382 184 aa7.93□□□□□ -1.14
HDAC6-236ENST00000498808 NMUP48645 174 aa7.92□□□□□ -1.14
HDAC6-236ENST00000498808 H0Y8G0 127 aa7.91□□□□□ -1.14
HDAC6-236ENST00000498808 TCL1BO95988 128 aa7.91□□□□□ -1.14
HDAC6-236ENST00000498808 COX7BP24311 80 aa7.91□□□□□ -1.14
HDAC6-236ENST00000498808 OR13C6PQ8NH95 151 aa7.91□□□□□ -1.14
HDAC6-236ENST00000498808 CHCHD1Q96BP2 118 aaKnown RBP7.9□□□□□ -1.14
HDAC6-236ENST00000498808 LGALS3P17931 250 aaKnown RBP7.89□□□□□ -1.15
HDAC6-236ENST00000498808 C6orf99Q4VX62 202 aa7.89□□□□□ -1.15
HDAC6-236ENST00000498808 UQCC3Q6UW78 93 aa7.89□□□□□ -1.15
HDAC6-236ENST00000498808 OBSCN-AS1Q96MR7 158 aa7.89□□□□□ -1.15
HDAC6-236ENST00000498808 A0A0J9YXY3 114 aa7.88□□□□□ -1.15
HDAC6-236ENST00000498808 CLLU1Q5K131 121 aa7.88□□□□□ -1.15
HDAC6-236ENST00000498808 C10orf91Q5T1B1 145 aa7.88□□□□□ -1.15
HDAC6-236ENST00000498808 PCP2Q8IVA1 136 aa7.88□□□□□ -1.15
HDAC6-236ENST00000498808 SPANXCQ9NY87 97 aa7.88□□□□□ -1.15
HDAC6-236ENST00000498808 IGLV5-48A0A075B6I7 105 aa7.87□□□□□ -1.15
HDAC6-236ENST00000498808 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
HDAC6-236ENST00000498808 KRTAP19-6Q3LI70 58 aa7.86□□□□□ -1.15
HDAC6-236ENST00000498808 SPANXDQ9BXN6 97 aa7.86□□□□□ -1.15
HDAC6-236ENST00000498808 PLNP26678 52 aa7.85□□□□□ -1.15
HDAC6-236ENST00000498808 HERVK_113P61574 105 aa7.85□□□□□ -1.15
HDAC6-236ENST00000498808 KRTAP6-3Q3LI67 103 aa7.85□□□□□ -1.15
HDAC6-236ENST00000498808 LINC00308Q8TCZ7 52 aa7.85□□□□□ -1.15
HDAC6-236ENST00000498808 LITAFQ99732 161 aa7.83□□□□□ -1.16
HDAC6-236ENST00000498808 PMCHL2Q9BQD1 86 aa7.83□□□□□ -1.16
HDAC6-236ENST00000498808 LINC00846Q9NV44 126 aa7.83□□□□□ -1.16
HDAC6-236ENST00000498808 TRBV20-1A0A075B6N2 111 aa7.82□□□□□ -1.16
HDAC6-236ENST00000498808 HSBP1O75506 76 aa7.82□□□□□ -1.16
HDAC6-236ENST00000498808 DPM2O94777 84 aa7.81□□□□□ -1.16
HDAC6-236ENST00000498808 TRBV7-6A0A0J9YX20 115 aa7.79□□□□□ -1.16
HDAC6-236ENST00000498808 LEPROTL1O95214 131 aa7.78□□□□□ -1.16
HDAC6-236ENST00000498808 IGKCP01834 107 aa7.78□□□□□ -1.16
HDAC6-236ENST00000498808 Q96NJ1 140 aa7.78□□□□□ -1.16
HDAC6-236ENST00000498808 A0A1B0GWB2 263 aa7.77□□□□□ -1.17
HDAC6-236ENST00000498808 C20orf166-AS1Q96NR2 134 aa7.77□□□□□ -1.17
HDAC6-236ENST00000498808 E9PLD3 99 aa7.76□□□□□ -1.17
HDAC6-236ENST00000498808 TRBV7-7A0A0K0K1E9 115 aa7.75□□□□□ -1.17
HDAC6-236ENST00000498808 LINC00518Q8N0U6 118 aa7.75□□□□□ -1.17
HDAC6-236ENST00000498808 A8MUU9 505 aa7.74□□□□□ -1.17
HDAC6-236ENST00000498808 TIMM17BO60830 172 aa7.74□□□□□ -1.17
HDAC6-236ENST00000498808 LINC00310P59036 64 aa7.74□□□□□ -1.17
HDAC6-236ENST00000498808 IGFL1Q6UW32 110 aa7.74□□□□□ -1.17
HDAC6-236ENST00000498808 FAM236DA0A1B0GTK5 79 aa7.73□□□□□ -1.17
HDAC6-236ENST00000498808 FAM236CP0DP71 79 aa7.73□□□□□ -1.17
HDAC6-236ENST00000498808 F8WEM9 126 aa7.71□□□□□ -1.18
HDAC6-236ENST00000498808 FABP4P15090 132 aa7.7□□□□□ -1.18
HDAC6-236ENST00000498808 CLEC2BQ92478 149 aa7.7□□□□□ -1.18
HDAC6-236ENST00000498808 YPEL4Q96NS1 127 aa7.7□□□□□ -1.18
HDAC6-236ENST00000498808 SERF1AO75920 110 aa7.69□□□□□ -1.18
HDAC6-236ENST00000498808 HSPB8Q9UJY1 196 aa7.69□□□□□ -1.18
HDAC6-236ENST00000498808 KRTAP16-1A8MUX0 517 aa7.68□□□□□ -1.18
HDAC6-236ENST00000498808 Q6JHZ5 121 aa7.68□□□□□ -1.18
HDAC6-236ENST00000498808 MPLKIPQ8TAP9 179 aa7.68□□□□□ -1.18
HDAC6-236ENST00000498808 NEBP20929 6669 aa7.67□□□□□ -1.18
HDAC6-236ENST00000498808 A4D1N5 150 aa7.67□□□□□ -1.18
HDAC6-236ENST00000498808 NHP2Q9NX24 153 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms