RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	DDT	P30046	118 aa		6.24	□□□□□ -1.41
FXR1-222	ENST00000498658	SNRPE	P62304	92 aa	Known RBP	6.24	□□□□□ -1.41
FXR1-222	ENST00000498658	TYMSOS	Q8TAI1	123 aa		6.24	□□□□□ -1.41
FXR1-222	ENST00000498658	HIGD2A	Q9BW72	106 aa		6.24	□□□□□ -1.41
FXR1-222	ENST00000498658	S100A6	P06703	90 aa		6.23	□□□□□ -1.41
FXR1-222	ENST00000498658	ADAMTSL4-AS1	Q5T5F5	129 aa		6.23	□□□□□ -1.41
FXR1-222	ENST00000498658	COPS9	Q8WXC6	57 aa		6.23	□□□□□ -1.41
FXR1-222	ENST00000498658		A0A087X002	238 aa		6.22	□□□□□ -1.41
FXR1-222	ENST00000498658	IGLV6-57	P01721	117 aa		6.22	□□□□□ -1.41
FXR1-222	ENST00000498658	SPANXC	Q9NY87	97 aa		6.22	□□□□□ -1.41
FXR1-222	ENST00000498658	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6.21	□□□□□ -1.42
FXR1-222	ENST00000498658	NPC2	P61916	151 aa		6.21	□□□□□ -1.42
FXR1-222	ENST00000498658	SCGB1D4	Q6XE38	83 aa		6.21	□□□□□ -1.42
FXR1-222	ENST00000498658	HIST3H2BB	Q8N257	126 aa		6.21	□□□□□ -1.42
FXR1-222	ENST00000498658	LINC00308	Q8TCZ7	52 aa		6.21	□□□□□ -1.42
FXR1-222	ENST00000498658	TRAV23DV6	A0A075B6W5	121 aa		6.2	□□□□□ -1.42
FXR1-222	ENST00000498658	HINT1	P49773	126 aa	Predicted RBP	6.2	□□□□□ -1.42
FXR1-222	ENST00000498658	CTAG1A	P78358	180 aa		6.2	□□□□□ -1.42
FXR1-222	ENST00000498658	JOSD1	Q15040	202 aa	Predicted RBP	6.2	□□□□□ -1.42
FXR1-222	ENST00000498658	KRTAP19-4	Q3LI73	84 aa		6.2	□□□□□ -1.42
FXR1-222	ENST00000498658	SOSTDC1	Q6X4U4	206 aa		6.2	□□□□□ -1.42
FXR1-222	ENST00000498658		Q6ZVH6	145 aa		6.2	□□□□□ -1.42
FXR1-222	ENST00000498658	LINC00518	Q8N0U6	118 aa		6.2	□□□□□ -1.42
FXR1-222	ENST00000498658	LITAF	Q99732	161 aa		6.2	□□□□□ -1.42
FXR1-222	ENST00000498658	HIST1H2BL	Q99880	126 aa		6.2	□□□□□ -1.42
FXR1-222	ENST00000498658	ANAPC11	Q9NYG5	84 aa		6.2	□□□□□ -1.42
FXR1-222	ENST00000498658		B5MCH6	92 aa		6.19	□□□□□ -1.42
FXR1-222	ENST00000498658	HSBP1L1	C9JCN9	74 aa		6.19	□□□□□ -1.42
FXR1-222	ENST00000498658	SPRR4	Q96PI1	79 aa		6.19	□□□□□ -1.42
FXR1-222	ENST00000498658	PPDPF	Q9H3Y8	114 aa		6.19	□□□□□ -1.42
FXR1-222	ENST00000498658	IFITM1	P13164	125 aa		6.18	□□□□□ -1.42
FXR1-222	ENST00000498658	ATOH7	Q8N100	152 aa		6.18	□□□□□ -1.42
FXR1-222	ENST00000498658	SMCR5	Q8TEV8	140 aa		6.18	□□□□□ -1.42
FXR1-222	ENST00000498658	SPANXD	Q9BXN6	97 aa		6.18	□□□□□ -1.42
FXR1-222	ENST00000498658	LRP2	P98164	4655 aa		6.17	□□□□□ -1.42
FXR1-222	ENST00000498658	ZNF73	O43830	326 aa	Predicted RBP	6.17	□□□□□ -1.42
FXR1-222	ENST00000498658	KRTAP13-2	Q52LG2	175 aa		6.17	□□□□□ -1.42
FXR1-222	ENST00000498658		Q6ZRX8	168 aa		6.17	□□□□□ -1.42
FXR1-222	ENST00000498658	LINC00304	Q8N9R0	145 aa		6.17	□□□□□ -1.42
FXR1-222	ENST00000498658	OR13C6P	Q8NH95	151 aa		6.17	□□□□□ -1.42
FXR1-222	ENST00000498658	TTTY13	Q9BZ97	58 aa		6.17	□□□□□ -1.42
FXR1-222	ENST00000498658	SPAG11A	Q6PDA7	123 aa		6.16	□□□□□ -1.42
FXR1-222	ENST00000498658	UBR4	Q5T4S7	5183 aa		6.15	□□□□□ -1.42
FXR1-222	ENST00000498658	C5orf52	A6NGY3	159 aa		6.15	□□□□□ -1.42
FXR1-222	ENST00000498658	TSPAN13	O95857	204 aa		6.15	□□□□□ -1.42
FXR1-222	ENST00000498658	PRR4	Q16378	134 aa		6.14	□□□□□ -1.43
FXR1-222	ENST00000498658	LINC00483	Q53H64	154 aa		6.14	□□□□□ -1.43
FXR1-222	ENST00000498658	PCP2	Q8IVA1	136 aa		6.14	□□□□□ -1.43
FXR1-222	ENST00000498658	GAGE2A	Q6NT46	116 aa		6.13	□□□□□ -1.43
FXR1-222	ENST00000498658	KRTAP4-12	Q9BQ66	201 aa		6.13	□□□□□ -1.43
FXR1-222	ENST00000498658		Q9BRP9	147 aa		6.13	□□□□□ -1.43
FXR1-222	ENST00000498658	SCGB1D1	O95968	90 aa		6.12	□□□□□ -1.43
FXR1-222	ENST00000498658	C3orf22	Q8N5N4	141 aa		6.12	□□□□□ -1.43
FXR1-222	ENST00000498658	DHRS4-AS1	Q9P1J3	65 aa		6.12	□□□□□ -1.43
FXR1-222	ENST00000498658	ERC2-IT1	O76042	136 aa		6.11	□□□□□ -1.43
FXR1-222	ENST00000498658	MUSTN1	Q8IVN3	82 aa		6.11	□□□□□ -1.43
FXR1-222	ENST00000498658	TRAV13-2	A0A0B4J235	113 aa		6.1	□□□□□ -1.43
FXR1-222	ENST00000498658	TRBV7-6	A0A0J9YX20	115 aa		6.1	□□□□□ -1.43
FXR1-222	ENST00000498658	COX7B	P24311	80 aa		6.1	□□□□□ -1.43
FXR1-222	ENST00000498658	SLC25A34	Q6PIV7	304 aa		6.1	□□□□□ -1.43
FXR1-222	ENST00000498658	SSBP3-AS1	Q7Z2R9	100 aa		6.1	□□□□□ -1.43
FXR1-222	ENST00000498658	KRTAP19-1	Q8IUB9	90 aa		6.1	□□□□□ -1.43
FXR1-222	ENST00000498658	KRTAP9-2	Q9BYQ4	174 aa		6.1	□□□□□ -1.43
FXR1-222	ENST00000498658		A6NDN8	102 aa		6.09	□□□□□ -1.43
FXR1-222	ENST00000498658	ELOF1	P60002	83 aa	Known RBP	6.09	□□□□□ -1.43
FXR1-222	ENST00000498658	C6orf99	Q4VX62	202 aa		6.09	□□□□□ -1.43
FXR1-222	ENST00000498658		A4D1N5	150 aa		6.08	□□□□□ -1.44
FXR1-222	ENST00000498658	SPINK1	P00995	79 aa		6.08	□□□□□ -1.44
FXR1-222	ENST00000498658		Q8NBF4	154 aa		6.08	□□□□□ -1.44
FXR1-222	ENST00000498658	LPA	P08519	4548 aa		6.07	□□□□□ -1.44
FXR1-222	ENST00000498658	IGLV9-49	A0A0B4J1Y8	123 aa		6.07	□□□□□ -1.44
FXR1-222	ENST00000498658		A0A1B0GWB2	263 aa		6.07	□□□□□ -1.44
FXR1-222	ENST00000498658	MOBP	Q13875	183 aa		6.07	□□□□□ -1.44
FXR1-222	ENST00000498658	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.05	□□□□□ -1.44
FXR1-222	ENST00000498658	DLEU1	O43261	78 aa		6.05	□□□□□ -1.44
FXR1-222	ENST00000498658	COX8A	P10176	69 aa		6.05	□□□□□ -1.44
FXR1-222	ENST00000498658	SPRR1B	P22528	89 aa		6.05	□□□□□ -1.44
FXR1-222	ENST00000498658	RPS29	P62273	56 aa	Known RBP	6.05	□□□□□ -1.44
FXR1-222	ENST00000498658	C9orf153	Q5TBE3	101 aa		6.05	□□□□□ -1.44
FXR1-222	ENST00000498658	ST20-AS1	Q8NBB2	130 aa		6.05	□□□□□ -1.44
FXR1-222	ENST00000498658	NHP2	Q9NX24	153 aa	Known RBP	6.05	□□□□□ -1.44
FXR1-222	ENST00000498658	KRTAP9-6	A0A140TA67	174 aa		6.04	□□□□□ -1.44
FXR1-222	ENST00000498658	C9orf118	A6NHY6	69 aa		6.04	□□□□□ -1.44
FXR1-222	ENST00000498658	VAMP3	Q15836	100 aa		6.04	□□□□□ -1.44
FXR1-222	ENST00000498658	FP248	Q71RG6	208 aa	Predicted RBP	6.04	□□□□□ -1.44
FXR1-222	ENST00000498658	LAMTOR3	Q9UHA4	124 aa		6.04	□□□□□ -1.44
FXR1-222	ENST00000498658	TAL2	Q16559	108 aa		6.03	□□□□□ -1.44
FXR1-222	ENST00000498658	HIST1H4G	Q99525	98 aa		6.03	□□□□□ -1.44
FXR1-222	ENST00000498658	IGLV7-46	A0A075B6I9	117 aa		6.02	□□□□□ -1.45
FXR1-222	ENST00000498658	TEX49	A0A1B0GTD5	131 aa		6.02	□□□□□ -1.45
FXR1-222	ENST00000498658	SLC25A20	O43772	301 aa		6.02	□□□□□ -1.45
FXR1-222	ENST00000498658	SMIM11B	Q8TCY0	68 aa		6.02	□□□□□ -1.45
FXR1-222	ENST00000498658	RETNLB	Q9BQ08	111 aa		6.02	□□□□□ -1.45
FXR1-222	ENST00000498658	VAMP8	Q9BV40	100 aa		6.02	□□□□□ -1.45
FXR1-222	ENST00000498658	TPRXL	Q17RH7	258 aa		6.01	□□□□□ -1.45
FXR1-222	ENST00000498658	SPATA45	Q537H7	98 aa		6	□□□□□ -1.45
FXR1-222	ENST00000498658	DEFB105A	Q8NG35	78 aa		6	□□□□□ -1.45
FXR1-222	ENST00000498658	HIGD1B	Q9P298	99 aa		6	□□□□□ -1.45
FXR1-222	ENST00000498658	PAM16	Q9Y3D7	125 aa		6	□□□□□ -1.45
FXR1-222	ENST00000498658	IGLV5-48	A0A075B6I7	105 aa		5.99	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 196 ms