RNA–Protein interactions for RNA: ENST00000498648.5

STRADB-210, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-210ENST00000498648 SNHG12Q9BXW3 62 aa2.25□□□□□ -2.05
STRADB-210ENST00000498648 C22orf24Q9Y442 160 aa2.25□□□□□ -2.05
STRADB-210ENST00000498648 ANK3Q12955 4377 aaKnown RBP2.25□□□□□ -2.05
STRADB-210ENST00000498648 RYR1P21817 5038 aa2.25□□□□□ -2.05
STRADB-210ENST00000498648 IGKV3-7A0A075B6H7 116 aa2.24□□□□□ -2.05
STRADB-210ENST00000498648 TRGV2A0A075B6R0 118 aa2.24□□□□□ -2.05
STRADB-210ENST00000498648 TRBV10-1A0A0K0K1A3 114 aa2.24□□□□□ -2.05
STRADB-210ENST00000498648 TMEM262E9PQX1 116 aa2.24□□□□□ -2.05
STRADB-210ENST00000498648 JMJD7-PLA2G4BH0Y9G9 81 aa2.24□□□□□ -2.05
STRADB-210ENST00000498648 M0R1W7 72 aa2.24□□□□□ -2.05
STRADB-210ENST00000498648 M0R2N4 97 aa2.24□□□□□ -2.05
STRADB-210ENST00000498648 PRB3Q04118 309 aaPredicted RBP2.24□□□□□ -2.05
STRADB-210ENST00000498648 WT1-ASQ06250 92 aa2.24□□□□□ -2.05
STRADB-210ENST00000498648 IQCJQ1A5X6 159 aa2.24□□□□□ -2.05
STRADB-210ENST00000498648 NDUFA11Q86Y39 141 aa2.24□□□□□ -2.05
STRADB-210ENST00000498648 DMAC1Q96GE9 116 aa2.24□□□□□ -2.05
STRADB-210ENST00000498648 ODF3Q96PU9 254 aa2.24□□□□□ -2.05
STRADB-210ENST00000498648 TMEM167BQ9NRX6 74 aa2.24□□□□□ -2.05
STRADB-210ENST00000498648 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.24□□□□□ -2.05
STRADB-210ENST00000498648 PRKDCP78527 4128 aaKnown RBP2.23□□□□□ -2.05
STRADB-210ENST00000498648 HIVEP2P31629 2446 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 IGLC7A0M8Q6 106 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 COX6B1P14854 86 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 PDE6GP18545 87 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 RBM3P98179 157 aaKnown RBP2.23□□□□□ -2.05
STRADB-210ENST00000498648 PLGLAQ15195 96 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 COL5A1-AS1Q5SY13 56 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 C10orf113Q5VZT2 155 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
STRADB-210ENST00000498648 C5orf38Q86SI9 138 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 SBSPONQ8IVN8 264 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 FAM167A-AS1Q96KT0 104 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 TRGV9Q99603 122 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 DPH3P1Q9H4G8 78 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 ARL2-SNX15V9GYD0 113 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 USF3Q68DE3 2245 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 WNK1Q9H4A3 2382 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 ZGRF1Q86YA3 2104 aa2.23□□□□□ -2.05
STRADB-210ENST00000498648 LOC110117498A0A087WWA1 95 aa2.22□□□□□ -2.05
STRADB-210ENST00000498648 EFNA4P52798 201 aa2.22□□□□□ -2.05
STRADB-210ENST00000498648 FXYD3Q14802 87 aa2.22□□□□□ -2.05
STRADB-210ENST00000498648 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
STRADB-210ENST00000498648 MINOS1Q5TGZ0 78 aa2.22□□□□□ -2.05
STRADB-210ENST00000498648 VMO1Q7Z5L0 202 aa2.22□□□□□ -2.05
STRADB-210ENST00000498648 IFI27L1Q96BM0 104 aa2.22□□□□□ -2.05
STRADB-210ENST00000498648 ZNF625Q96I27 306 aaPredicted RBP2.22□□□□□ -2.05
STRADB-210ENST00000498648 TMEM14CQ9P0S9 112 aa2.22□□□□□ -2.05
STRADB-210ENST00000498648 HILPDAQ9Y5L2 63 aa2.22□□□□□ -2.05
STRADB-210ENST00000498648 TRRAPQ9Y4A5 3859 aa2.22□□□□□ -2.05
STRADB-210ENST00000498648 ROS1P08922 2347 aa2.22□□□□□ -2.05
STRADB-210ENST00000498648 PLCE1Q9P212 2302 aa2.22□□□□□ -2.05
STRADB-210ENST00000498648 RYR2Q92736 4967 aa2.21□□□□□ -2.06
STRADB-210ENST00000498648 I3L2K1 104 aa2.21□□□□□ -2.06
STRADB-210ENST00000498648 NDUFA3O95167 84 aa2.21□□□□□ -2.06
STRADB-210ENST00000498648 DNAL4O96015 105 aa2.21□□□□□ -2.06
STRADB-210ENST00000498648 IGLC1P0CG04 106 aa2.21□□□□□ -2.06
STRADB-210ENST00000498648 APELAP0DMC3 54 aa2.21□□□□□ -2.06
STRADB-210ENST00000498648 KRTAP10-7P60409 375 aaPredicted RBP2.21□□□□□ -2.06
STRADB-210ENST00000498648 UBE2L3P68036 154 aaKnown RBP2.21□□□□□ -2.06
STRADB-210ENST00000498648 LINC00322Q6ZN03 302 aaPredicted RBP2.21□□□□□ -2.06
STRADB-210ENST00000498648 BAGE2Q86Y30 109 aa2.21□□□□□ -2.06
STRADB-210ENST00000498648 Q8N6K4 173 aa2.21□□□□□ -2.06
STRADB-210ENST00000498648 WFDC10AQ9H1F0 79 aa2.21□□□□□ -2.06
STRADB-210ENST00000498648 MRPL35Q9NZE8 188 aaKnown RBP2.21□□□□□ -2.06
STRADB-210ENST00000498648 VWFP04275 2813 aa2.21□□□□□ -2.06
STRADB-210ENST00000498648 K7EIM0 57 aa2.2□□□□□ -2.06
STRADB-210ENST00000498648 KRTAP10-10P60014 251 aa2.2□□□□□ -2.06
STRADB-210ENST00000498648 SPTSSBQ8NFR3 76 aa2.2□□□□□ -2.06
STRADB-210ENST00000498648 FAM103A1Q9BTL3 118 aaKnown RBP2.2□□□□□ -2.06
STRADB-210ENST00000498648 BPESC1Q9GZL8 116 aa2.2□□□□□ -2.06
STRADB-210ENST00000498648 SNURFQ9Y675 71 aa2.2□□□□□ -2.06
STRADB-210ENST00000498648 V9GYV3 84 aa2.2□□□□□ -2.06
STRADB-210ENST00000498648 DOCK11Q5JSL3 2073 aa2.2□□□□□ -2.06
STRADB-210ENST00000498648 ARFGEF3Q5TH69 2177 aa2.2□□□□□ -2.06
STRADB-210ENST00000498648 TRAV12-3A0A0B4J271 114 aa2.19□□□□□ -2.06
STRADB-210ENST00000498648 TRBV6-1A0A0K0K1D8 114 aa2.19□□□□□ -2.06
STRADB-210ENST00000498648 TRBV10-3A0A0K0K1G6 114 aa2.19□□□□□ -2.06
STRADB-210ENST00000498648 SMIM27A0A1W2PRY6 76 aa2.19□□□□□ -2.06
STRADB-210ENST00000498648 CCKP06307 115 aa2.19□□□□□ -2.06
STRADB-210ENST00000498648 PYY3Q5JQD4 70 aa2.19□□□□□ -2.06
STRADB-210ENST00000498648 CCL19Q99731 98 aa2.19□□□□□ -2.06
STRADB-210ENST00000498648 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
STRADB-210ENST00000498648 TNCP24821 2201 aa2.18□□□□□ -2.06
STRADB-210ENST00000498648 HERC2O95714 4834 aa2.18□□□□□ -2.06
STRADB-210ENST00000498648 TRAV23DV6A0A075B6W5 121 aa2.18□□□□□ -2.06
STRADB-210ENST00000498648 SPINK4O60575 86 aa2.18□□□□□ -2.06
STRADB-210ENST00000498648 IGLC2P0DOY2 106 aa2.18□□□□□ -2.06
STRADB-210ENST00000498648 ATP5EP56381 51 aaPredicted RBP2.18□□□□□ -2.06
STRADB-210ENST00000498648 Q0VG73 95 aa2.18□□□□□ -2.06
STRADB-210ENST00000498648 KLK9Q2XQG4 91 aa2.18□□□□□ -2.06
STRADB-210ENST00000498648 RABAC1Q9UI14 185 aa2.18□□□□□ -2.06
STRADB-210ENST00000498648 TENM3Q9P273 2699 aa2.17□□□□□ -2.06
STRADB-210ENST00000498648 UBR4Q5T4S7 5183 aa2.17□□□□□ -2.06
STRADB-210ENST00000498648 RBAKDNA6NC62 111 aa2.17□□□□□ -2.06
STRADB-210ENST00000498648 HIGD1CA8MV81 97 aa2.17□□□□□ -2.06
STRADB-210ENST00000498648 HCG22E2RYF7 251 aa2.17□□□□□ -2.06
STRADB-210ENST00000498648 G3V318 75 aa2.17□□□□□ -2.06
STRADB-210ENST00000498648 PCOTHQ58A44 107 aa2.17□□□□□ -2.06
STRADB-210ENST00000498648 GDF5OSQ5U4N7 250 aa2.17□□□□□ -2.06
STRADB-210ENST00000498648 Q86TA4 180 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms