RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 HIST1H2BJP06899 126 aa9.67□□□□□ -0.86
CDKN2A-209ENST00000498628 HIST1H2BOP23527 126 aa9.67□□□□□ -0.86
CDKN2A-209ENST00000498628 HIST1H2BBP33778 126 aa9.67□□□□□ -0.86
CDKN2A-209ENST00000498628 HIST1H2BDP58876 126 aa9.67□□□□□ -0.86
CDKN2A-209ENST00000498628 HIST1H2BCP62807 126 aa9.67□□□□□ -0.86
CDKN2A-209ENST00000498628 MOBPQ13875 183 aa9.67□□□□□ -0.86
CDKN2A-209ENST00000498628 HIST2H2BEQ16778 126 aa9.67□□□□□ -0.86
CDKN2A-209ENST00000498628 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.67□□□□□ -0.86
CDKN2A-209ENST00000498628 HIST1H2BHQ93079 126 aa9.67□□□□□ -0.86
CDKN2A-209ENST00000498628 HIST1H2BNQ99877 126 aa9.67□□□□□ -0.86
CDKN2A-209ENST00000498628 HIST1H2BMQ99879 126 aa9.67□□□□□ -0.86
CDKN2A-209ENST00000498628 C5orf52A6NGY3 159 aa9.66□□□□□ -0.86
CDKN2A-209ENST00000498628 TIMM17BO60830 172 aa9.66□□□□□ -0.86
CDKN2A-209ENST00000498628 RPS29P62273 56 aaKnown RBP9.66□□□□□ -0.86
CDKN2A-209ENST00000498628 SOSTDC1Q6X4U4 206 aa9.66□□□□□ -0.86
CDKN2A-209ENST00000498628 SPANXCQ9NY87 97 aa9.66□□□□□ -0.86
CDKN2A-209ENST00000498628 LINC01545Q5VT33 79 aa9.65□□□□□ -0.86
CDKN2A-209ENST00000498628 OR13C6PQ8NH95 151 aa9.65□□□□□ -0.86
CDKN2A-209ENST00000498628 MUC2Q02817 5179 aa9.64□□□□□ -0.87
CDKN2A-209ENST00000498628 LINC00308Q8TCZ7 52 aa9.64□□□□□ -0.87
CDKN2A-209ENST00000498628 ZNF815PA8K554 130 aa9.63□□□□□ -0.87
CDKN2A-209ENST00000498628 C9orf153Q5TBE3 101 aa9.63□□□□□ -0.87
CDKN2A-209ENST00000498628 LINC00518Q8N0U6 118 aa9.62□□□□□ -0.87
CDKN2A-209ENST00000498628 SLC25A20O43772 301 aa9.61□□□□□ -0.87
CDKN2A-209ENST00000498628 EIF4EBP3O60516 100 aaPredicted RBP9.61□□□□□ -0.87
CDKN2A-209ENST00000498628 SLC25A34Q6PIV7 304 aa9.61□□□□□ -0.87
CDKN2A-209ENST00000498628 SPANXDQ9BXN6 97 aa9.61□□□□□ -0.87
CDKN2A-209ENST00000498628 COPS9Q8WXC6 57 aa9.6□□□□□ -0.87
CDKN2A-209ENST00000498628 LITAFQ99732 161 aa9.6□□□□□ -0.87
CDKN2A-209ENST00000498628 DHRS4-AS1Q9P1J3 65 aa9.6□□□□□ -0.87
CDKN2A-209ENST00000498628 C20orf202A1L168 122 aa9.59□□□□□ -0.87
CDKN2A-209ENST00000498628 C3orf79P0CE67 100 aa9.58□□□□□ -0.88
CDKN2A-209ENST00000498628 MUC17Q685J3 4493 aa9.58□□□□□ -0.88
CDKN2A-209ENST00000498628 AKR1D1P51857 326 aa9.57□□□□□ -0.88
CDKN2A-209ENST00000498628 KRTDAPP60985 99 aa9.57□□□□□ -0.88
CDKN2A-209ENST00000498628 KRTAP13-3Q3SY46 172 aa9.57□□□□□ -0.88
CDKN2A-209ENST00000498628 SCGB1D4Q6XE38 83 aa9.57□□□□□ -0.88
CDKN2A-209ENST00000498628 Q8N377 158 aa9.57□□□□□ -0.88
CDKN2A-209ENST00000498628 ST20-AS1Q8NBB2 130 aa9.56□□□□□ -0.88
CDKN2A-209ENST00000498628 COA6Q5JTJ3 125 aaKnown RBP9.55□□□□□ -0.88
CDKN2A-209ENST00000498628 LAMTOR3Q9UHA4 124 aa9.55□□□□□ -0.88
CDKN2A-209ENST00000498628 COX7BP24311 80 aa9.54□□□□□ -0.88
CDKN2A-209ENST00000498628 SPRR1BP22528 89 aa9.53□□□□□ -0.88
CDKN2A-209ENST00000498628 SEC61BP60468 96 aaKnown RBP9.53□□□□□ -0.88
CDKN2A-209ENST00000498628 IFITM1P13164 125 aa9.52□□□□□ -0.89
CDKN2A-209ENST00000498628 ELOF1P60002 83 aaKnown RBP9.52□□□□□ -0.89
CDKN2A-209ENST00000498628 C6orf99Q4VX62 202 aa9.52□□□□□ -0.89
CDKN2A-209ENST00000498628 Q6ZVH6 145 aa9.52□□□□□ -0.89
CDKN2A-209ENST00000498628 LIMD2Q9BT23 127 aa9.52□□□□□ -0.89
CDKN2A-209ENST00000498628 TTTY13Q9BZ97 58 aa9.52□□□□□ -0.89
CDKN2A-209ENST00000498628 TAL2Q16559 108 aa9.51□□□□□ -0.89
CDKN2A-209ENST00000498628 ASB16-AS1Q495Z4 193 aa9.51□□□□□ -0.89
CDKN2A-209ENST00000498628 TRBV7-6A0A0J9YX20 115 aa9.5□□□□□ -0.89
CDKN2A-209ENST00000498628 TEX49A0A1B0GTD5 131 aa9.47□□□□□ -0.89
CDKN2A-209ENST00000498628 A0A1B0GWB2 263 aa9.47□□□□□ -0.89
CDKN2A-209ENST00000498628 A6NDN8 102 aa9.47□□□□□ -0.89
CDKN2A-209ENST00000498628 SNRPEP62304 92 aaKnown RBP9.47□□□□□ -0.89
CDKN2A-209ENST00000498628 FAT4Q6V0I7 4981 aa9.47□□□□□ -0.89
CDKN2A-209ENST00000498628 ANKRD39Q53RE8 183 aa9.46□□□□□ -0.9
CDKN2A-209ENST00000498628 DEFB105AQ8NG35 78 aa9.46□□□□□ -0.9
CDKN2A-209ENST00000498628 A4D1N5 150 aa9.45□□□□□ -0.9
CDKN2A-209ENST00000498628 LCE2AQ5TA79 106 aaPredicted RBP9.45□□□□□ -0.9
CDKN2A-209ENST00000498628 PRO1933Q9H354 126 aa9.45□□□□□ -0.9
CDKN2A-209ENST00000498628 HRCT1Q6UXD1 115 aa9.44□□□□□ -0.9
CDKN2A-209ENST00000498628 MUSTN1Q8IVN3 82 aa9.44□□□□□ -0.9
CDKN2A-209ENST00000498628 ATOH7Q8N100 152 aa9.44□□□□□ -0.9
CDKN2A-209ENST00000498628 TRAV13-2A0A0B4J235 113 aa9.43□□□□□ -0.9
CDKN2A-209ENST00000498628 CD164Q04900 197 aa9.43□□□□□ -0.9
CDKN2A-209ENST00000498628 NHP2Q9NX24 153 aaKnown RBP9.43□□□□□ -0.9
CDKN2A-209ENST00000498628 Q1RN00 199 aa9.42□□□□□ -0.9
CDKN2A-209ENST00000498628 XP32Q5T750 250 aa9.41□□□□□ -0.9
CDKN2A-209ENST00000498628 H7C2G1 150 aa9.4□□□□□ -0.9
CDKN2A-209ENST00000498628 PCP2Q8IVA1 136 aa9.4□□□□□ -0.9
CDKN2A-209ENST00000498628 HSBP1L1C9JCN9 74 aa9.39□□□□□ -0.91
CDKN2A-209ENST00000498628 S100A2P29034 98 aa9.39□□□□□ -0.91
CDKN2A-209ENST00000498628 LINC01547P58512 204 aaPredicted RBP9.39□□□□□ -0.91
CDKN2A-209ENST00000498628 VAMP3Q15836 100 aa9.39□□□□□ -0.91
CDKN2A-209ENST00000498628 IGLV5-48A0A075B6I7 105 aa9.36□□□□□ -0.91
CDKN2A-209ENST00000498628 SMIM29Q86T20 159 aa9.34□□□□□ -0.91
CDKN2A-209ENST00000498628 SMIM11BQ8TCY0 68 aa9.34□□□□□ -0.91
CDKN2A-209ENST00000498628 Q5XG85 94 aa9.33□□□□□ -0.92
CDKN2A-209ENST00000498628 F8WEM9 126 aa9.32□□□□□ -0.92
CDKN2A-209ENST00000498628 S100A6P06703 90 aa9.32□□□□□ -0.92
CDKN2A-209ENST00000498628 HIST3H2BBQ8N257 126 aa9.32□□□□□ -0.92
CDKN2A-209ENST00000498628 KRTAP9-2Q9BYQ4 174 aa9.32□□□□□ -0.92
CDKN2A-209ENST00000498628 HIST1H2BLQ99880 126 aa9.31□□□□□ -0.92
CDKN2A-209ENST00000498628 C9orf92A6NGG3 77 aa9.3□□□□□ -0.92
CDKN2A-209ENST00000498628 TCL1BO95988 128 aa9.29□□□□□ -0.92
CDKN2A-209ENST00000498628 KRTAP4-1Q9BYQ7 146 aa9.29□□□□□ -0.92
CDKN2A-209ENST00000498628 S100A1P23297 94 aa9.28□□□□□ -0.92
CDKN2A-209ENST00000498628 hADV29S1A0JD25 119 aa9.26□□□□□ -0.93
CDKN2A-209ENST00000498628 LINC00575Q6W349 94 aa9.26□□□□□ -0.93
CDKN2A-209ENST00000498628 PCOTHQ58A44 107 aa9.25□□□□□ -0.93
CDKN2A-209ENST00000498628 C1orf195Q5TG92 126 aa9.25□□□□□ -0.93
CDKN2A-209ENST00000498628 IGLV8-61A0A075B6I0 122 aa9.23□□□□□ -0.93
CDKN2A-209ENST00000498628 SCGB1D1O95968 90 aa9.23□□□□□ -0.93
CDKN2A-209ENST00000498628 Q6JHZ5 121 aa9.23□□□□□ -0.93
CDKN2A-209ENST00000498628 HIST1H4GQ99525 98 aa9.23□□□□□ -0.93
CDKN2A-209ENST00000498628 BVES-AS1Q5T3Y7 98 aa9.22□□□□□ -0.93
CDKN2A-209ENST00000498628 Q6ZQY7 126 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms