RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 CHCHD1Q96BP2 118 aaKnown RBP7.85□□□□□ -1.15
TRAF4-212ENST00000498540 C5orf52A6NGY3 159 aa7.84□□□□□ -1.15
TRAF4-212ENST00000498540 H0Y8G0 127 aa7.84□□□□□ -1.15
TRAF4-212ENST00000498540 EIF4EBP3O60516 100 aaPredicted RBP7.84□□□□□ -1.15
TRAF4-212ENST00000498540 SPRR1BP22528 89 aa7.84□□□□□ -1.15
TRAF4-212ENST00000498540 SOSTDC1Q6X4U4 206 aa7.84□□□□□ -1.15
TRAF4-212ENST00000498540 COX6B2Q6YFQ2 88 aa7.84□□□□□ -1.15
TRAF4-212ENST00000498540 J3QQQ9 107 aa7.82□□□□□ -1.16
TRAF4-212ENST00000498540 NPC2P61916 151 aa7.82□□□□□ -1.16
TRAF4-212ENST00000498540 COMMD7Q86VX2 200 aa7.82□□□□□ -1.16
TRAF4-212ENST00000498540 KRTAP9-7A8MTY7 169 aa7.81□□□□□ -1.16
TRAF4-212ENST00000498540 IFITM2Q01629 132 aa7.81□□□□□ -1.16
TRAF4-212ENST00000498540 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.8□□□□□ -1.16
TRAF4-212ENST00000498540 H7C2G1 150 aa7.8□□□□□ -1.16
TRAF4-212ENST00000498540 RPL37P61927 97 aaKnown RBP7.8□□□□□ -1.16
TRAF4-212ENST00000498540 SLC25A34Q6PIV7 304 aa7.8□□□□□ -1.16
TRAF4-212ENST00000498540 LAMTOR3Q9UHA4 124 aa7.79□□□□□ -1.16
TRAF4-212ENST00000498540 NMUP48645 174 aa7.78□□□□□ -1.16
TRAF4-212ENST00000498540 HINT1P49773 126 aaPredicted RBP7.78□□□□□ -1.16
TRAF4-212ENST00000498540 CD164Q04900 197 aa7.78□□□□□ -1.16
TRAF4-212ENST00000498540 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
TRAF4-212ENST00000498540 HSBP1O75506 76 aa7.77□□□□□ -1.17
TRAF4-212ENST00000498540 LGALS3P17931 250 aaKnown RBP7.77□□□□□ -1.17
TRAF4-212ENST00000498540 PLNP26678 52 aa7.77□□□□□ -1.17
TRAF4-212ENST00000498540 Q1RN00 199 aa7.77□□□□□ -1.17
TRAF4-212ENST00000498540 C1orf195Q5TG92 126 aa7.77□□□□□ -1.17
TRAF4-212ENST00000498540 DHRS4-AS1Q9P1J3 65 aa7.77□□□□□ -1.17
TRAF4-212ENST00000498540 A0A0J9YXY3 114 aa7.75□□□□□ -1.17
TRAF4-212ENST00000498540 HERVK_113P61574 105 aa7.75□□□□□ -1.17
TRAF4-212ENST00000498540 PMCHL2Q9BQD1 86 aa7.75□□□□□ -1.17
TRAF4-212ENST00000498540 Q5XG85 94 aa7.74□□□□□ -1.17
TRAF4-212ENST00000498540 PRO1933Q9H354 126 aa7.74□□□□□ -1.17
TRAF4-212ENST00000498540 CBY1Q9Y3M2 126 aa7.74□□□□□ -1.17
TRAF4-212ENST00000498540 A0A0G2JQZ4 141 aa7.73□□□□□ -1.17
TRAF4-212ENST00000498540 DPM2O94777 84 aa7.73□□□□□ -1.17
TRAF4-212ENST00000498540 LEPROTL1O95214 131 aa7.73□□□□□ -1.17
TRAF4-212ENST00000498540 DEFB105AQ8NG35 78 aa7.73□□□□□ -1.17
TRAF4-212ENST00000498540 OR13C6PQ8NH95 151 aa7.73□□□□□ -1.17
TRAF4-212ENST00000498540 YPEL4Q96NS1 127 aa7.73□□□□□ -1.17
TRAF4-212ENST00000498540 ELOF1P60002 83 aaKnown RBP7.72□□□□□ -1.17
TRAF4-212ENST00000498540 IGKCP01834 107 aa7.71□□□□□ -1.18
TRAF4-212ENST00000498540 APOC3P02656 99 aa7.71□□□□□ -1.18
TRAF4-212ENST00000498540 LINC00310P59036 64 aa7.71□□□□□ -1.18
TRAF4-212ENST00000498540 TAL2Q16559 108 aa7.71□□□□□ -1.18
TRAF4-212ENST00000498540 SPANXCQ9NY87 97 aa7.71□□□□□ -1.18
TRAF4-212ENST00000498540 COX7BP24311 80 aa7.7□□□□□ -1.18
TRAF4-212ENST00000498540 SMIM29Q86T20 159 aa7.7□□□□□ -1.18
TRAF4-212ENST00000498540 TEX49A0A1B0GTD5 131 aa7.69□□□□□ -1.18
TRAF4-212ENST00000498540 AKR1D1P51857 326 aa7.69□□□□□ -1.18
TRAF4-212ENST00000498540 C6orf99Q4VX62 202 aa7.69□□□□□ -1.18
TRAF4-212ENST00000498540 LINC00308Q8TCZ7 52 aa7.69□□□□□ -1.18
TRAF4-212ENST00000498540 LITAFQ99732 161 aa7.69□□□□□ -1.18
TRAF4-212ENST00000498540 SERF1AO75920 110 aa7.68□□□□□ -1.18
TRAF4-212ENST00000498540 SNAPINO95295 136 aa7.68□□□□□ -1.18
TRAF4-212ENST00000498540 SPANXDQ9BXN6 97 aa7.68□□□□□ -1.18
TRAF4-212ENST00000498540 FABP4P15090 132 aa7.67□□□□□ -1.18
TRAF4-212ENST00000498540 Q6Q795 121 aa7.67□□□□□ -1.18
TRAF4-212ENST00000498540 E9PLD3 99 aa7.66□□□□□ -1.18
TRAF4-212ENST00000498540 SVBPQ8N300 66 aa7.66□□□□□ -1.18
TRAF4-212ENST00000498540 HSPB8Q9UJY1 196 aa7.66□□□□□ -1.18
TRAF4-212ENST00000498540 SSPOA2VEC9 5147 aa7.64□□□□□ -1.19
TRAF4-212ENST00000498540 USH2AO75445 5202 aa7.64□□□□□ -1.19
TRAF4-212ENST00000498540 IGLV5-48A0A075B6I7 105 aa7.63□□□□□ -1.19
TRAF4-212ENST00000498540 TRGC2P03986 189 aa7.63□□□□□ -1.19
TRAF4-212ENST00000498540 TIMM17BO60830 172 aa7.62□□□□□ -1.19
TRAF4-212ENST00000498540 NDUFA5Q16718 116 aa7.62□□□□□ -1.19
TRAF4-212ENST00000498540 KRTAP9-8Q9BYQ0 159 aa7.62□□□□□ -1.19
TRAF4-212ENST00000498540 TRBV7-6A0A0J9YX20 115 aa7.6□□□□□ -1.19
TRAF4-212ENST00000498540 TCL1BO95988 128 aa7.6□□□□□ -1.19
TRAF4-212ENST00000498540 CFC1P0CG37 223 aa7.6□□□□□ -1.19
TRAF4-212ENST00000498540 LINC00518Q8N0U6 118 aa7.59□□□□□ -1.19
TRAF4-212ENST00000498540 A0A1B0GWB2 263 aa7.58□□□□□ -1.2
TRAF4-212ENST00000498540 TTTY13Q9BZ97 58 aa7.58□□□□□ -1.2
TRAF4-212ENST00000498540 ZNF815PA8K554 130 aa7.57□□□□□ -1.2
TRAF4-212ENST00000498540 ATP11AUNQ6ZP68 121 aa7.57□□□□□ -1.2
TRAF4-212ENST00000498540 Q75L30 129 aa7.56□□□□□ -1.2
TRAF4-212ENST00000498540 PCP2Q8IVA1 136 aa7.56□□□□□ -1.2
TRAF4-212ENST00000498540 OBSCN-AS1Q96MR7 158 aa7.56□□□□□ -1.2
TRAF4-212ENST00000498540 FCGBPQ9Y6R7 5405 aaPredicted RBP7.53□□□□□ -1.2
TRAF4-212ENST00000498540 SYS1-DBNDD2H3BUS1 97 aa7.52□□□□□ -1.21
TRAF4-212ENST00000498540 A6NDN8 102 aa7.51□□□□□ -1.21
TRAF4-212ENST00000498540 F8WEM9 126 aa7.5□□□□□ -1.21
TRAF4-212ENST00000498540 LINC01545Q5VT33 79 aa7.5□□□□□ -1.21
TRAF4-212ENST00000498540 TRBV7-7A0A0K0K1E9 115 aa7.49□□□□□ -1.21
TRAF4-212ENST00000498540 C20orf202A1L168 122 aa7.49□□□□□ -1.21
TRAF4-212ENST00000498540 A4D1N5 150 aa7.49□□□□□ -1.21
TRAF4-212ENST00000498540 KRTAP19-1Q8IUB9 90 aa7.49□□□□□ -1.21
TRAF4-212ENST00000498540 MT2AP02795 61 aa7.48□□□□□ -1.21
TRAF4-212ENST00000498540 NHP2Q9NX24 153 aaKnown RBP7.48□□□□□ -1.21
TRAF4-212ENST00000498540 CLEC2BQ92478 149 aa7.47□□□□□ -1.21
TRAF4-212ENST00000498540 LCE2BO14633 110 aa7.46□□□□□ -1.22
TRAF4-212ENST00000498540 IGFL1Q6UW32 110 aa7.46□□□□□ -1.22
TRAF4-212ENST00000498540 SCGB1D4Q6XE38 83 aa7.46□□□□□ -1.22
TRAF4-212ENST00000498540 SMIM11BQ8TCY0 68 aa7.46□□□□□ -1.22
TRAF4-212ENST00000498540 IFITM1P13164 125 aa7.45□□□□□ -1.22
TRAF4-212ENST00000498540 Q96NJ1 140 aa7.45□□□□□ -1.22
TRAF4-212ENST00000498540 Q6JHZ5 121 aa7.44□□□□□ -1.22
TRAF4-212ENST00000498540 MUSTN1Q8IVN3 82 aa7.44□□□□□ -1.22
TRAF4-212ENST00000498540 COPS9Q8WXC6 57 aa7.44□□□□□ -1.22
TRAF4-212ENST00000498540 MT1FP04733 61 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms