RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ZNF706Q9Y5V0 76 aaPredicted RBP7.55□□□□□ -1.2
HSPG2-213ENST00000498495 TRAV23DV6A0A075B6W5 121 aa7.54□□□□□ -1.2
HSPG2-213ENST00000498495 B5MCH6 92 aa7.54□□□□□ -1.2
HSPG2-213ENST00000498495 HSBP1L1C9JCN9 74 aa7.54□□□□□ -1.2
HSPG2-213ENST00000498495 LINC00518Q8N0U6 118 aa7.54□□□□□ -1.2
HSPG2-213ENST00000498495 SPRR4Q96PI1 79 aa7.54□□□□□ -1.2
HSPG2-213ENST00000498495 HINT1P49773 126 aaPredicted RBP7.53□□□□□ -1.2
HSPG2-213ENST00000498495 KRTAP13-2Q52LG2 175 aa7.53□□□□□ -1.2
HSPG2-213ENST00000498495 COPS9Q8WXC6 57 aa7.53□□□□□ -1.2
HSPG2-213ENST00000498495 SPANXDQ9BXN6 97 aa7.53□□□□□ -1.2
HSPG2-213ENST00000498495 HMCN2Q8NDA2 5059 aa7.53□□□□□ -1.2
HSPG2-213ENST00000498495 C5orf52A6NGY3 159 aa7.52□□□□□ -1.21
HSPG2-213ENST00000498495 ZNF73O43830 326 aaPredicted RBP7.52□□□□□ -1.21
HSPG2-213ENST00000498495 TSPAN13O95857 204 aa7.52□□□□□ -1.21
HSPG2-213ENST00000498495 SCGB1D1O95968 90 aa7.52□□□□□ -1.21
HSPG2-213ENST00000498495 IFITM1P13164 125 aa7.52□□□□□ -1.21
HSPG2-213ENST00000498495 Q6ZVH6 145 aa7.52□□□□□ -1.21
HSPG2-213ENST00000498495 JOSD1Q15040 202 aaPredicted RBP7.51□□□□□ -1.21
HSPG2-213ENST00000498495 Q6ZRX8 168 aa7.51□□□□□ -1.21
HSPG2-213ENST00000498495 MUSTN1Q8IVN3 82 aa7.5□□□□□ -1.21
HSPG2-213ENST00000498495 GAGE2AQ6NT46 116 aa7.49□□□□□ -1.21
HSPG2-213ENST00000498495 Q9BRP9 147 aa7.49□□□□□ -1.21
HSPG2-213ENST00000498495 PPDPFQ9H3Y8 114 aa7.49□□□□□ -1.21
HSPG2-213ENST00000498495 ERC2-IT1O76042 136 aa7.48□□□□□ -1.21
HSPG2-213ENST00000498495 C3orf22Q8N5N4 141 aa7.48□□□□□ -1.21
HSPG2-213ENST00000498495 LINC00304Q8N9R0 145 aa7.48□□□□□ -1.21
HSPG2-213ENST00000498495 A6NDN8 102 aa7.46□□□□□ -1.22
HSPG2-213ENST00000498495 PRR4Q16378 134 aa7.46□□□□□ -1.22
HSPG2-213ENST00000498495 LINC00483Q53H64 154 aa7.45□□□□□ -1.22
HSPG2-213ENST00000498495 C6orf99Q4VX62 202 aa7.44□□□□□ -1.22
HSPG2-213ENST00000498495 C4orf48Q5BLP8 95 aa7.44□□□□□ -1.22
HSPG2-213ENST00000498495 COX7BP24311 80 aa7.43□□□□□ -1.22
HSPG2-213ENST00000498495 SPAG11AQ6PDA7 123 aa7.43□□□□□ -1.22
HSPG2-213ENST00000498495 TRAV13-2A0A0B4J235 113 aa7.42□□□□□ -1.22
HSPG2-213ENST00000498495 CTAG1AP78358 180 aa7.42□□□□□ -1.22
HSPG2-213ENST00000498495 DHRS4-AS1Q9P1J3 65 aa7.42□□□□□ -1.22
HSPG2-213ENST00000498495 IGLV9-49A0A0B4J1Y8 123 aa7.41□□□□□ -1.22
HSPG2-213ENST00000498495 ELOF1P60002 83 aaKnown RBP7.41□□□□□ -1.22
HSPG2-213ENST00000498495 ST20-AS1Q8NBB2 130 aa7.41□□□□□ -1.22
HSPG2-213ENST00000498495 TRBV7-6A0A0J9YX20 115 aa7.4□□□□□ -1.22
HSPG2-213ENST00000498495 COX8AP10176 69 aa7.4□□□□□ -1.22
HSPG2-213ENST00000498495 SSBP3-AS1Q7Z2R9 100 aa7.4□□□□□ -1.22
HSPG2-213ENST00000498495 Q8NBF4 154 aa7.4□□□□□ -1.22
HSPG2-213ENST00000498495 MOBPQ13875 183 aa7.39□□□□□ -1.23
HSPG2-213ENST00000498495 A0A1B0GWB2 263 aa7.38□□□□□ -1.23
HSPG2-213ENST00000498495 A4D1N5 150 aa7.38□□□□□ -1.23
HSPG2-213ENST00000498495 DLEU1O43261 78 aa7.38□□□□□ -1.23
HSPG2-213ENST00000498495 C14orf144Q96I85 54 aa7.38□□□□□ -1.23
HSPG2-213ENST00000498495 HIST1H4GQ99525 98 aa7.38□□□□□ -1.23
HSPG2-213ENST00000498495 RETNLBQ9BQ08 111 aa7.38□□□□□ -1.23
HSPG2-213ENST00000498495 PAM16Q9Y3D7 125 aa7.38□□□□□ -1.23
HSPG2-213ENST00000498495 TAL2Q16559 108 aa7.37□□□□□ -1.23
HSPG2-213ENST00000498495 SPATA45Q537H7 98 aa7.37□□□□□ -1.23
HSPG2-213ENST00000498495 SLC25A34Q6PIV7 304 aa7.37□□□□□ -1.23
HSPG2-213ENST00000498495 SMIM11BQ8TCY0 68 aa7.37□□□□□ -1.23
HSPG2-213ENST00000498495 VAMP8Q9BV40 100 aa7.37□□□□□ -1.23
HSPG2-213ENST00000498495 SPINK1P00995 79 aa7.36□□□□□ -1.23
HSPG2-213ENST00000498495 C9orf153Q5TBE3 101 aa7.36□□□□□ -1.23
HSPG2-213ENST00000498495 UBR4Q5T4S7 5183 aa7.35□□□□□ -1.23
HSPG2-213ENST00000498495 SPRR1BP22528 89 aa7.35□□□□□ -1.23
HSPG2-213ENST00000498495 VAMP3Q15836 100 aa7.35□□□□□ -1.23
HSPG2-213ENST00000498495 DEFB105AQ8NG35 78 aa7.35□□□□□ -1.23
HSPG2-213ENST00000498495 LAMTOR3Q9UHA4 124 aa7.35□□□□□ -1.23
HSPG2-213ENST00000498495 LRP2P98164 4655 aa7.35□□□□□ -1.23
HSPG2-213ENST00000498495 LPAP08519 4548 aa7.33□□□□□ -1.24
HSPG2-213ENST00000498495 NHP2Q9NX24 153 aaKnown RBP7.33□□□□□ -1.24
HSPG2-213ENST00000498495 IGLV7-46A0A075B6I9 117 aa7.32□□□□□ -1.24
HSPG2-213ENST00000498495 TEX49A0A1B0GTD5 131 aa7.32□□□□□ -1.24
HSPG2-213ENST00000498495 C12orf57Q99622 126 aa7.32□□□□□ -1.24
HSPG2-213ENST00000498495 HIGD1BQ9P298 99 aa7.32□□□□□ -1.24
HSPG2-213ENST00000498495 TMA7Q9Y2S6 64 aaKnown RBP7.32□□□□□ -1.24
HSPG2-213ENST00000498495 SLC25A20O43772 301 aa7.31□□□□□ -1.24
HSPG2-213ENST00000498495 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
HSPG2-213ENST00000498495 Q1RN00 199 aa7.29□□□□□ -1.24
HSPG2-213ENST00000498495 PYY3Q5JQD4 70 aa7.28□□□□□ -1.24
HSPG2-213ENST00000498495 LINC00575Q6W349 94 aa7.28□□□□□ -1.24
HSPG2-213ENST00000498495 RAB37Q96AX2 223 aa7.28□□□□□ -1.24
HSPG2-213ENST00000498495 IGLV5-48A0A075B6I7 105 aa7.27□□□□□ -1.25
HSPG2-213ENST00000498495 CFC1BP0CG36 223 aa7.27□□□□□ -1.25
HSPG2-213ENST00000498495 CFC1P0CG37 223 aa7.27□□□□□ -1.25
HSPG2-213ENST00000498495 BVES-AS1Q5T3Y7 98 aa7.27□□□□□ -1.25
HSPG2-213ENST00000498495 C2orf91Q6ZV80 131 aa7.27□□□□□ -1.25
HSPG2-213ENST00000498495 FP248Q71RG6 208 aaPredicted RBP7.27□□□□□ -1.25
HSPG2-213ENST00000498495 hADV29S1A0JD25 119 aa7.26□□□□□ -1.25
HSPG2-213ENST00000498495 H7C2G1 150 aa7.26□□□□□ -1.25
HSPG2-213ENST00000498495 LINC01547P58512 204 aaPredicted RBP7.26□□□□□ -1.25
HSPG2-213ENST00000498495 SMIM29Q86T20 159 aa7.26□□□□□ -1.25
HSPG2-213ENST00000498495 CDIP1Q9H305 208 aa7.26□□□□□ -1.25
HSPG2-213ENST00000498495 PRO1933Q9H354 126 aa7.26□□□□□ -1.25
HSPG2-213ENST00000498495 TPRXLQ17RH7 258 aa7.25□□□□□ -1.25
HSPG2-213ENST00000498495 HRCT1Q6UXD1 115 aa7.25□□□□□ -1.25
HSPG2-213ENST00000498495 CEND1Q8N111 149 aa7.25□□□□□ -1.25
HSPG2-213ENST00000498495 Q8N377 158 aa7.25□□□□□ -1.25
HSPG2-213ENST00000498495 A0A0B4J2C4 111 aa7.23□□□□□ -1.25
HSPG2-213ENST00000498495 TMEM238LA0A1B0GVL6 79 aa7.23□□□□□ -1.25
HSPG2-213ENST00000498495 A6NJY4 79 aa7.23□□□□□ -1.25
HSPG2-213ENST00000498495 Q6ZQY7 126 aa7.22□□□□□ -1.25
HSPG2-213ENST00000498495 SNCGO76070 127 aa7.21□□□□□ -1.26
HSPG2-213ENST00000498495 CD164Q04900 197 aa7.21□□□□□ -1.26
HSPG2-213ENST00000498495 LIMD2Q9BT23 127 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms