RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 XAGE1AQ9HD64 81 aa1.36□□□□□ -2.19
RIF1-212ENST00000498041 C6orf48Q9UBA6 75 aa1.36□□□□□ -2.19
RIF1-212ENST00000498041 UQCR10Q9UDW1 63 aa1.36□□□□□ -2.19
RIF1-212ENST00000498041 PRO0255Q9UI72 69 aa1.36□□□□□ -2.19
RIF1-212ENST00000498041 HSPB8Q9UJY1 196 aa1.36□□□□□ -2.19
RIF1-212ENST00000498041 LAMTOR2Q9Y2Q5 125 aa1.36□□□□□ -2.19
RIF1-212ENST00000498041 C22orf24Q9Y442 160 aa1.36□□□□□ -2.19
RIF1-212ENST00000498041 CSDC2Q9Y534 153 aaKnown RBP1.36□□□□□ -2.19
RIF1-212ENST00000498041 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
RIF1-212ENST00000498041 COL7A1Q02388 2944 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 TRAV12-1A0A0B4J245 112 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 IGHV1-58A0A0C4DH39 117 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 SMIM9A6NGZ8 99 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 LYRM9A8MSI8 78 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 M0R143 59 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 NCR3O14931 201 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 S100A7P31151 101 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 CCL18P55774 89 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 KRTAP13-1Q8IUC0 172 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 LINC00337Q8N6G1 96 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 COX7B2Q8TF08 81 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 ORAOV1Q8WV07 137 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 CARD19Q96LW7 228 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 B9D2Q9BPU9 175 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 C2orf88Q9BSF0 95 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 NHP2Q9NX24 153 aaKnown RBP1.35□□□□□ -2.19
RIF1-212ENST00000498041 CRCT1Q9UGL9 99 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 CBY1Q9Y3M2 126 aa1.35□□□□□ -2.19
RIF1-212ENST00000498041 TRAV10A0A0B4J240 114 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 TINCRA0A1B0GVN0 87 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 UBE2L6O14933 153 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 ERC2-IT1O76042 136 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 TSPAN13O95857 204 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 LY6G6CO95867 125 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 TCL1BO95988 128 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 PSMB2P49721 201 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 LINC00158P58513 81 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 S100A12P80511 92 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 MRPL23Q16540 153 aaKnown RBP1.34□□□□□ -2.19
RIF1-212ENST00000498041 LELP1Q5T871 98 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 SPINT4Q6UDR6 99 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.34□□□□□ -2.19
RIF1-212ENST00000498041 Q6ZRN7 208 aaPredicted RBP1.34□□□□□ -2.19
RIF1-212ENST00000498041 PHF5AQ7RTV0 110 aaKnown RBP1.34□□□□□ -2.19
RIF1-212ENST00000498041 MRPL52Q86TS9 123 aaKnown RBP1.34□□□□□ -2.19
RIF1-212ENST00000498041 SPANXA2-OT1Q8N9U9 137 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 LINC00308Q8TCZ7 52 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 TIMM21Q9BVV7 248 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 GEMIN7Q9H840 131 aaKnown RBP1.34□□□□□ -2.19
RIF1-212ENST00000498041 C8orf17Q9NRJ1 99 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 NDUFA12Q9UI09 145 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 MRPS16Q9Y3D3 137 aaKnown RBP1.34□□□□□ -2.19
RIF1-212ENST00000498041 ICOSQ9Y6W8 199 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 RNF213Q63HN8 5207 aa1.34□□□□□ -2.19
RIF1-212ENST00000498041 DNAH7Q8WXX0 4024 aa1.33□□□□□ -2.2
RIF1-212ENST00000498041 A0A096LNI7 61 aa1.33□□□□□ -2.2
RIF1-212ENST00000498041 IGKV2-24A0A0C4DH68 120 aa1.33□□□□□ -2.2
RIF1-212ENST00000498041 TMEM238C9JI98 176 aa1.33□□□□□ -2.2
RIF1-212ENST00000498041 TSTD3H0UI37 97 aa1.33□□□□□ -2.2
RIF1-212ENST00000498041 LGALS3P17931 250 aaKnown RBP1.33□□□□□ -2.2
RIF1-212ENST00000498041 SS18Q15532 418 aa1.33□□□□□ -2.2
RIF1-212ENST00000498041 MEIG1Q5JSS6 88 aa1.33□□□□□ -2.2
RIF1-212ENST00000498041 SAMD13Q5VXD3 122 aa1.33□□□□□ -2.2
RIF1-212ENST00000498041 FAM19A3Q7Z5A8 133 aa1.33□□□□□ -2.2
RIF1-212ENST00000498041 SND1-IT1Q9HBX3 110 aa1.33□□□□□ -2.2
RIF1-212ENST00000498041 SPANXA1Q9NS26 97 aa1.33□□□□□ -2.2
RIF1-212ENST00000498041 TRAV8-4A0A0B4J246 113 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 IBA57-AS1B1ANH7 110 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 H3BMG7 143 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 H3BRM9 83 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 NDUFA1O15239 70 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 SIVA1O15304 175 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 DLEU1O43261 78 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 SMR3BP02814 79 aaPredicted RBP1.32□□□□□ -2.2
RIF1-212ENST00000498041 RPL18AQ02543 176 aaKnown RBP1.32□□□□□ -2.2
RIF1-212ENST00000498041 SPAG11BQ08648 103 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 HSD52Q0P140 79 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 SCGB1D4Q6XE38 83 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 FAM19A5Q7Z5A7 132 aaPredicted RBP1.32□□□□□ -2.2
RIF1-212ENST00000498041 C3orf22Q8N5N4 141 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 SMIM11BQ8TCY0 68 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 ERG28Q9UKR5 140 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 MGAM2Q2M2H8 2515 aa1.32□□□□□ -2.2
RIF1-212ENST00000498041 DNAH10Q8IVF4 4471 aa1.31□□□□□ -2.2
RIF1-212ENST00000498041 LOC107984156A0A0G2JMH3 177 aa1.31□□□□□ -2.2
RIF1-212ENST00000498041 TRBV10-3A0A0K0K1G6 114 aa1.31□□□□□ -2.2
RIF1-212ENST00000498041 NBDYA0A0U1RRE5 68 aa1.31□□□□□ -2.2
RIF1-212ENST00000498041 HSBP1L1C9JCN9 74 aa1.31□□□□□ -2.2
RIF1-212ENST00000498041 COX7A2LO14548 114 aa1.31□□□□□ -2.2
RIF1-212ENST00000498041 PPP1R17O96001 155 aa1.31□□□□□ -2.2
RIF1-212ENST00000498041 VAMP3Q15836 100 aa1.31□□□□□ -2.2
RIF1-212ENST00000498041 MIAQ16674 131 aa1.31□□□□□ -2.2
RIF1-212ENST00000498041 MRPL55Q7Z7F7 128 aaKnown RBP1.31□□□□□ -2.2
RIF1-212ENST00000498041 ARL17AQ8IVW1 177 aa1.31□□□□□ -2.2
RIF1-212ENST00000498041 UBE2DNLQ8IWF7 75 aa1.31□□□□□ -2.2
RIF1-212ENST00000498041 OR13C6PQ8NH95 151 aa1.31□□□□□ -2.2
RIF1-212ENST00000498041 SPANXB1Q9NS25 103 aaPredicted RBP1.31□□□□□ -2.2
RIF1-212ENST00000498041 HIGD1BQ9P298 99 aa1.31□□□□□ -2.2
RIF1-212ENST00000498041 DNAH1Q9P2D7 4330 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms