RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 KRTAP10-9P60411 292 aa7.1□□□□□ -1.27
TRAPPC12-223ENST00000497597 Q6ZTC4 211 aa7.1□□□□□ -1.27
TRAPPC12-223ENST00000497597 LINC00208Q96KT6 92 aa7.1□□□□□ -1.27
TRAPPC12-223ENST00000497597 UBR5O95071 2799 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC12-223ENST00000497597 IGKV2D-24A0A075B6R9 120 aa7.1□□□□□ -1.27
TRAPPC12-223ENST00000497597 Q6ZRP5 223 aa7.1□□□□□ -1.27
TRAPPC12-223ENST00000497597 ZNF469Q96JG9 3925 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC12-223ENST00000497597 CMC4P56277 68 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC12-223ENST00000497597 UBE2BP63146 152 aa7.09□□□□□ -1.27
TRAPPC12-223ENST00000497597 ST20-AS1Q8NBB2 130 aa7.09□□□□□ -1.27
TRAPPC12-223ENST00000497597 LINC00612Q8N6U2 182 aa7.08□□□□□ -1.28
TRAPPC12-223ENST00000497597 PRR15LQ9BU68 103 aa7.08□□□□□ -1.28
TRAPPC12-223ENST00000497597 hDV103S1A0JD37 113 aa7.08□□□□□ -1.28
TRAPPC12-223ENST00000497597 ELOF1P60002 83 aaKnown RBP7.08□□□□□ -1.28
TRAPPC12-223ENST00000497597 HIVEP1P15822 2718 aa7.08□□□□□ -1.28
TRAPPC12-223ENST00000497597 KPRPQ5T749 579 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC12-223ENST00000497597 Q6ZRU5 148 aa7.07□□□□□ -1.28
TRAPPC12-223ENST00000497597 ETDCA0A1B0GVM5 59 aa7.07□□□□□ -1.28
TRAPPC12-223ENST00000497597 M0R378 163 aa7.07□□□□□ -1.28
TRAPPC12-223ENST00000497597 C1orf137Q5JT78 98 aa7.07□□□□□ -1.28
TRAPPC12-223ENST00000497597 VWFP04275 2813 aa7.07□□□□□ -1.28
TRAPPC12-223ENST00000497597 A6NED7 52 aa7.06□□□□□ -1.28
TRAPPC12-223ENST00000497597 H3BQ85 93 aa7.06□□□□□ -1.28
TRAPPC12-223ENST00000497597 K7EQZ3 153 aa7.06□□□□□ -1.28
TRAPPC12-223ENST00000497597 MP68P56378 58 aa7.06□□□□□ -1.28
TRAPPC12-223ENST00000497597 CSNK1G2-AS1Q8NCQ2 148 aa7.06□□□□□ -1.28
TRAPPC12-223ENST00000497597 PKD1L1Q8TDX9 2849 aa7.06□□□□□ -1.28
TRAPPC12-223ENST00000497597 IGSF10Q6WRI0 2623 aa7.06□□□□□ -1.28
TRAPPC12-223ENST00000497597 A0A096LNI7 61 aa7.05□□□□□ -1.28
TRAPPC12-223ENST00000497597 IGLV1-51P01701 117 aa7.04□□□□□ -1.28
TRAPPC12-223ENST00000497597 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC12-223ENST00000497597 ERC2-IT1O76042 136 aa7.03□□□□□ -1.28
TRAPPC12-223ENST00000497597 VPREB1P12018 145 aa7.03□□□□□ -1.28
TRAPPC12-223ENST00000497597 IGHV4-30-4P0DP06 118 aa7.02□□□□□ -1.28
TRAPPC12-223ENST00000497597 LINC00528Q8N1L1 170 aa7.02□□□□□ -1.29
TRAPPC12-223ENST00000497597 C19orf73Q9NVV2 129 aa7.01□□□□□ -1.29
TRAPPC12-223ENST00000497597 X6R8D5 127 aa7.01□□□□□ -1.29
TRAPPC12-223ENST00000497597 FSHBP01225 129 aa7.01□□□□□ -1.29
TRAPPC12-223ENST00000497597 RPL37AP61513 92 aaKnown RBP7.01□□□□□ -1.29
TRAPPC12-223ENST00000497597 PRR15Q8IV56 129 aa7.01□□□□□ -1.29
TRAPPC12-223ENST00000497597 Q8N377 158 aa7.01□□□□□ -1.29
TRAPPC12-223ENST00000497597 A0A1W2PNM2 257 aa7□□□□□ -1.29
TRAPPC12-223ENST00000497597 FASNP49327 2511 aaKnown RBP7□□□□□ -1.29
TRAPPC12-223ENST00000497597 LELP1Q5T871 98 aa6.99□□□□□ -1.29
TRAPPC12-223ENST00000497597 HELZ2Q9BYK8 2649 aaKnown RBP6.99□□□□□ -1.29
TRAPPC12-223ENST00000497597 B9D2Q9BPU9 175 aa6.99□□□□□ -1.29
TRAPPC12-223ENST00000497597 SYCNQ0VAF6 134 aa6.98□□□□□ -1.29
TRAPPC12-223ENST00000497597 C7orf33Q8WU49 177 aa6.98□□□□□ -1.29
TRAPPC12-223ENST00000497597 HCG22E2RYF7 251 aa6.98□□□□□ -1.29
TRAPPC12-223ENST00000497597 PSCAO43653 123 aa6.98□□□□□ -1.29
TRAPPC12-223ENST00000497597 SPART-AS1P0CW21 52 aa6.98□□□□□ -1.29
TRAPPC12-223ENST00000497597 PCOTHQ58A44 107 aa6.98□□□□□ -1.29
TRAPPC12-223ENST00000497597 NOTCH1P46531 2555 aa6.98□□□□□ -1.29
TRAPPC12-223ENST00000497597 A0A087WSZ3 146 aa6.98□□□□□ -1.29
TRAPPC12-223ENST00000497597 LYRM9A8MSI8 78 aa6.97□□□□□ -1.29
TRAPPC12-223ENST00000497597 EGFEM1PQ0D2K5 195 aa6.97□□□□□ -1.29
TRAPPC12-223ENST00000497597 SERTAD4-AS1Q5TG53 156 aa6.97□□□□□ -1.29
TRAPPC12-223ENST00000497597 FAM168BA1KXE4 195 aa6.96□□□□□ -1.3
TRAPPC12-223ENST00000497597 UBE2AP49459 152 aa6.96□□□□□ -1.3
TRAPPC12-223ENST00000497597 DEFB113Q30KQ7 82 aa6.96□□□□□ -1.3
TRAPPC12-223ENST00000497597 Q1T7F1 81 aa6.95□□□□□ -1.3
TRAPPC12-223ENST00000497597 OTOGQ6ZRI0 2925 aa6.95□□□□□ -1.3
TRAPPC12-223ENST00000497597 COL6A5A8TX70 2615 aa6.95□□□□□ -1.3
TRAPPC12-223ENST00000497597 H0Y9P7 68 aa6.95□□□□□ -1.3
TRAPPC12-223ENST00000497597 Q8NBF4 154 aa6.95□□□□□ -1.3
TRAPPC12-223ENST00000497597 SRRM2Q9UQ35 2752 aaKnown RBP6.94□□□□□ -1.3
TRAPPC12-223ENST00000497597 H0Y9J4 135 aa6.94□□□□□ -1.3
TRAPPC12-223ENST00000497597 DSCR10P59022 87 aa6.94□□□□□ -1.3
TRAPPC12-223ENST00000497597 IGKV2-24A0A0C4DH68 120 aa6.94□□□□□ -1.3
TRAPPC12-223ENST00000497597 CD164Q04900 197 aa6.94□□□□□ -1.3
TRAPPC12-223ENST00000497597 HECTD1Q9ULT8 2610 aa6.93□□□□□ -1.3
TRAPPC12-223ENST00000497597 NDUFB1O75438 58 aa6.93□□□□□ -1.3
TRAPPC12-223ENST00000497597 NDUFS5O43920 106 aa6.92□□□□□ -1.3
TRAPPC12-223ENST00000497597 SPAG11AQ6PDA7 123 aa6.92□□□□□ -1.3
TRAPPC12-223ENST00000497597 APOC4P55056 127 aa6.92□□□□□ -1.3
TRAPPC12-223ENST00000497597 RBM12B-AS1Q9P1G2 102 aa6.92□□□□□ -1.3
TRAPPC12-223ENST00000497597 NBEAL1Q6ZS30 2694 aa6.91□□□□□ -1.3
TRAPPC12-223ENST00000497597 Q5VV11 94 aa6.91□□□□□ -1.3
TRAPPC12-223ENST00000497597 ITPR2Q14571 2701 aa6.91□□□□□ -1.3
TRAPPC12-223ENST00000497597 C16orf90A8MZG2 172 aa6.91□□□□□ -1.3
TRAPPC12-223ENST00000497597 PRLHP81277 87 aa6.91□□□□□ -1.3
TRAPPC12-223ENST00000497597 MAST4O15021 2626 aa6.9□□□□□ -1.31
TRAPPC12-223ENST00000497597 LINC00476Q8WZB0 136 aa6.9□□□□□ -1.31
TRAPPC12-223ENST00000497597 DHRS4-AS1Q9P1J3 65 aa6.9□□□□□ -1.31
TRAPPC12-223ENST00000497597 CSMD3Q7Z407 3707 aa6.9□□□□□ -1.31
TRAPPC12-223ENST00000497597 GVQW2A0A096LPI5 108 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC12-223ENST00000497597 CASC2Q6XLA1 102 aa6.89□□□□□ -1.31
TRAPPC12-223ENST00000497597 FLNBO75369 2602 aaKnown RBP6.89□□□□□ -1.31
TRAPPC12-223ENST00000497597 FBN1P35555 2871 aaKnown RBP6.88□□□□□ -1.31
TRAPPC12-223ENST00000497597 C15orf56Q8N910 161 aa6.88□□□□□ -1.31
TRAPPC12-223ENST00000497597 Q9BRP9 147 aa6.88□□□□□ -1.31
TRAPPC12-223ENST00000497597 PRR34Q9NV39 138 aa6.88□□□□□ -1.31
TRAPPC12-223ENST00000497597 Q6ZRX8 168 aa6.88□□□□□ -1.31
TRAPPC12-223ENST00000497597 KTN1-AS1Q86SY8 53 aa6.87□□□□□ -1.31
TRAPPC12-223ENST00000497597 SMR3AQ99954 134 aa6.87□□□□□ -1.31
TRAPPC12-223ENST00000497597 LIMD2Q9BT23 127 aa6.86□□□□□ -1.31
TRAPPC12-223ENST00000497597 IGLV5-48A0A075B6I7 105 aa6.86□□□□□ -1.31
TRAPPC12-223ENST00000497597 Q8N9P0 234 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC12-223ENST00000497597 TRRAPQ9Y4A5 3859 aa6.85□□□□□ -1.31
TRAPPC12-223ENST00000497597 COA5Q86WW8 74 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms