RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 NDUFA12Q9UI09 145 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 UBE2D4Q9Y2X8 147 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 CSDC2Q9Y534 153 aaKnown RBP3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.8□□□□□ -1.8
CACNA1C-229ENST00000496818 IGHV3-73A0A0B4J1V6 119 aa3.8□□□□□ -1.8
CACNA1C-229ENST00000496818 TRAV13-2A0A0B4J235 113 aa3.8□□□□□ -1.8
CACNA1C-229ENST00000496818 TRBV10-1A0A0K0K1A3 114 aa3.8□□□□□ -1.8
CACNA1C-229ENST00000496818 TEX49A0A1B0GTD5 131 aa3.8□□□□□ -1.8
CACNA1C-229ENST00000496818 TRBV6-4A0A1B0GX49 114 aa3.8□□□□□ -1.8
CACNA1C-229ENST00000496818 COX7CP15954 63 aa3.8□□□□□ -1.8
CACNA1C-229ENST00000496818 HIST1H4AP62805 103 aaKnown RBP3.8□□□□□ -1.8
CACNA1C-229ENST00000496818 HERVK_113P63121 156 aa3.8□□□□□ -1.8
CACNA1C-229ENST00000496818 C9orf153Q5TBE3 101 aa3.8□□□□□ -1.8
CACNA1C-229ENST00000496818 Q6ZSA8 131 aa3.8□□□□□ -1.8
CACNA1C-229ENST00000496818 HERC1Q15751 4861 aa3.79□□□□□ -1.8
CACNA1C-229ENST00000496818 DMBT1Q9UGM3 2413 aaPredicted RBP3.79□□□□□ -1.8
CACNA1C-229ENST00000496818 H0YGX0 51 aa3.79□□□□□ -1.8
CACNA1C-229ENST00000496818 H3BQ85 93 aa3.79□□□□□ -1.8
CACNA1C-229ENST00000496818 CCDC179H3BU77 68 aa3.79□□□□□ -1.8
CACNA1C-229ENST00000496818 SCXQ7RTU7 201 aa3.79□□□□□ -1.8
CACNA1C-229ENST00000496818 IGHV3-64A0A075B6Q5 118 aa3.78□□□□□ -1.8
CACNA1C-229ENST00000496818 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.78□□□□□ -1.8
CACNA1C-229ENST00000496818 TRBV10-3A0A0K0K1G6 114 aa3.78□□□□□ -1.8
CACNA1C-229ENST00000496818 FAM236AA0A1B0GUQ0 79 aa3.78□□□□□ -1.8
CACNA1C-229ENST00000496818 FAM236BA0A1B0GV22 79 aa3.78□□□□□ -1.8
CACNA1C-229ENST00000496818 IGKV2-29A2NJV5 120 aaPredicted RBP3.78□□□□□ -1.8
CACNA1C-229ENST00000496818 LECT2O14960 151 aa3.78□□□□□ -1.8
CACNA1C-229ENST00000496818 OXTP01178 125 aa3.78□□□□□ -1.8
CACNA1C-229ENST00000496818 DAZ4Q86SG3 579 aaKnown RBP3.78□□□□□ -1.8
CACNA1C-229ENST00000496818 DAZ3Q9NR90 486 aaKnown RBP3.78□□□□□ -1.8
CACNA1C-229ENST00000496818 IGKV2D-24A0A075B6R9 120 aa3.77□□□□□ -1.81
CACNA1C-229ENST00000496818 RPL28P46779 137 aaKnown RBP3.77□□□□□ -1.81
CACNA1C-229ENST00000496818 RPL36AP83881 106 aaKnown RBP3.77□□□□□ -1.81
CACNA1C-229ENST00000496818 C14orf177Q52M58 125 aa3.77□□□□□ -1.81
CACNA1C-229ENST00000496818 Q6JHZ5 121 aa3.77□□□□□ -1.81
CACNA1C-229ENST00000496818 Q9UF83 564 aa3.77□□□□□ -1.81
CACNA1C-229ENST00000496818 NDUFC2O95298 119 aa3.76□□□□□ -1.81
CACNA1C-229ENST00000496818 DNAL4O96015 105 aa3.76□□□□□ -1.81
CACNA1C-229ENST00000496818 CRPP02741 224 aa3.76□□□□□ -1.81
CACNA1C-229ENST00000496818 RPL37AP61513 92 aaKnown RBP3.76□□□□□ -1.81
CACNA1C-229ENST00000496818 RPL18AQ02543 176 aaKnown RBP3.76□□□□□ -1.81
CACNA1C-229ENST00000496818 RNASE13Q5GAN3 156 aaKnown RBP3.76□□□□□ -1.81
CACNA1C-229ENST00000496818 SERP2Q8N6R1 65 aa3.76□□□□□ -1.81
CACNA1C-229ENST00000496818 LINC00308Q8TCZ7 52 aa3.76□□□□□ -1.81
CACNA1C-229ENST00000496818 MYCBP2O75592 4640 aa3.75□□□□□ -1.81
CACNA1C-229ENST00000496818 JMJD7-PLA2G4BH0Y9G9 81 aa3.75□□□□□ -1.81
CACNA1C-229ENST00000496818 H7C2G1 150 aa3.75□□□□□ -1.81
CACNA1C-229ENST00000496818 LINC00694P0DN24 101 aa3.75□□□□□ -1.81
CACNA1C-229ENST00000496818 ADAMTSL4-AS1Q5T5F5 129 aa3.75□□□□□ -1.81
CACNA1C-229ENST00000496818 LINC00242Q5T6M2 205 aa3.75□□□□□ -1.81
CACNA1C-229ENST00000496818 OBSCN-AS1Q96MR7 158 aa3.75□□□□□ -1.81
CACNA1C-229ENST00000496818 CDKN2A-AS1Q9UH64 79 aa3.75□□□□□ -1.81
CACNA1C-229ENST00000496818 A0A1B0GUV1 79 aa3.74□□□□□ -1.81
CACNA1C-229ENST00000496818 hADV29S1A0JD25 119 aa3.74□□□□□ -1.81
CACNA1C-229ENST00000496818 SMIM1B2RUZ4 78 aa3.74□□□□□ -1.81
CACNA1C-229ENST00000496818 FAT1Q14517 4588 aa3.74□□□□□ -1.81
CACNA1C-229ENST00000496818 NTM-AS1Q6ZSK4 140 aa3.74□□□□□ -1.81
CACNA1C-229ENST00000496818 CIRBP-AS1Q8TBR5 109 aa3.74□□□□□ -1.81
CACNA1C-229ENST00000496818 TMEM243Q9BU79 118 aa3.74□□□□□ -1.81
CACNA1C-229ENST00000496818 CDC42SE2Q9NRR3 84 aa3.74□□□□□ -1.81
CACNA1C-229ENST00000496818 BAALC-AS2P0C853 105 aa3.73□□□□□ -1.81
CACNA1C-229ENST00000496818 ATP5EP56381 51 aaPredicted RBP3.73□□□□□ -1.81
CACNA1C-229ENST00000496818 COX6A2Q02221 97 aa3.73□□□□□ -1.81
CACNA1C-229ENST00000496818 LINC01561Q8N1V8 128 aa3.73□□□□□ -1.81
CACNA1C-229ENST00000496818 ZNF625Q96I27 306 aaPredicted RBP3.73□□□□□ -1.81
CACNA1C-229ENST00000496818 CHCHD5Q9BSY4 110 aa3.73□□□□□ -1.81
CACNA1C-229ENST00000496818 KLK12Q9UKR0 248 aa3.73□□□□□ -1.81
CACNA1C-229ENST00000496818 UBE2L6O14933 153 aa3.72□□□□□ -1.81
CACNA1C-229ENST00000496818 NDUFC1O43677 76 aa3.72□□□□□ -1.81
CACNA1C-229ENST00000496818 PDE6GP18545 87 aa3.72□□□□□ -1.81
CACNA1C-229ENST00000496818 LINC01547P58512 204 aaPredicted RBP3.72□□□□□ -1.81
CACNA1C-229ENST00000496818 CLEC2BQ92478 149 aa3.72□□□□□ -1.81
CACNA1C-229ENST00000496818 TRAV13-1A0A0B4J241 112 aa3.71□□□□□ -1.82
CACNA1C-229ENST00000496818 ANGP03950 147 aaKnown RBP3.71□□□□□ -1.82
CACNA1C-229ENST00000496818 KRTAP10-4P60372 401 aaPredicted RBP3.71□□□□□ -1.82
CACNA1C-229ENST00000496818 C2orf48Q96LS8 159 aa3.71□□□□□ -1.82
CACNA1C-229ENST00000496818 TRBV6-8A0A0A6YYG3 113 aa3.7□□□□□ -1.82
CACNA1C-229ENST00000496818 IGLV9-49A0A0B4J1Y8 123 aa3.7□□□□□ -1.82
CACNA1C-229ENST00000496818 TMEM256-PLSCR3K7ERE1 68 aa3.7□□□□□ -1.82
CACNA1C-229ENST00000496818 FAM19A5Q7Z5A7 132 aaPredicted RBP3.7□□□□□ -1.82
CACNA1C-229ENST00000496818 SMIM29Q86T20 159 aa3.7□□□□□ -1.82
CACNA1C-229ENST00000496818 LINC00167Q96N53 147 aa3.7□□□□□ -1.82
CACNA1C-229ENST00000496818 ORMDL1Q9P0S3 153 aa3.7□□□□□ -1.82
CACNA1C-229ENST00000496818 FLG2Q5D862 2391 aaPredicted RBP3.7□□□□□ -1.82
CACNA1C-229ENST00000496818 LOC107984640A0A0U1RRK4 108 aa3.69□□□□□ -1.82
CACNA1C-229ENST00000496818 CCKP06307 115 aa3.69□□□□□ -1.82
CACNA1C-229ENST00000496818 NPC2P61916 151 aa3.69□□□□□ -1.82
CACNA1C-229ENST00000496818 SOSTDC1Q6X4U4 206 aa3.69□□□□□ -1.82
CACNA1C-229ENST00000496818 Q6ZRU5 148 aa3.69□□□□□ -1.82
CACNA1C-229ENST00000496818 SMCR5Q8TEV8 140 aa3.69□□□□□ -1.82
CACNA1C-229ENST00000496818 COX7B2Q8TF08 81 aa3.69□□□□□ -1.82
CACNA1C-229ENST00000496818 VPS13BQ7Z7G8 4022 aa3.68□□□□□ -1.82
CACNA1C-229ENST00000496818 A0A087WZ39 114 aa3.68□□□□□ -1.82
CACNA1C-229ENST00000496818 IGHV3OR16-9A0A0B4J2B5 98 aa3.68□□□□□ -1.82
CACNA1C-229ENST00000496818 COX17Q14061 63 aa3.68□□□□□ -1.82
CACNA1C-229ENST00000496818 CLPSL2Q6UWE3 100 aa3.68□□□□□ -1.82
CACNA1C-229ENST00000496818 C7orf33Q8WU49 177 aa3.68□□□□□ -1.82
CACNA1C-229ENST00000496818 DPH3Q96FX2 82 aa3.68□□□□□ -1.82
CACNA1C-229ENST00000496818 UBL5Q9BZL1 73 aa3.68□□□□□ -1.82
CACNA1C-229ENST00000496818 SND1-IT1Q9HBX3 110 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms