RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 TRAV23DV6A0A075B6W5 121 aa13.46□□□□□ -0.25
CHRD-217ENST00000496527 FAM229BQ4G0N7 80 aa13.46□□□□□ -0.25
CHRD-217ENST00000496527 OR13C6PQ8NH95 151 aa13.46□□□□□ -0.25
CHRD-217ENST00000496527 CBY1Q9Y3M2 126 aa13.46□□□□□ -0.25
CHRD-217ENST00000496527 B5MCH6 92 aa13.45□□□□□ -0.26
CHRD-217ENST00000496527 IFITM1P13164 125 aa13.45□□□□□ -0.26
CHRD-217ENST00000496527 Q6ZVH6 145 aa13.45□□□□□ -0.26
CHRD-217ENST00000496527 LINC00518Q8N0U6 118 aa13.44□□□□□ -0.26
CHRD-217ENST00000496527 TYMSOSQ8TAI1 123 aa13.44□□□□□ -0.26
CHRD-217ENST00000496527 SMCR5Q8TEV8 140 aa13.43□□□□□ -0.26
CHRD-217ENST00000496527 ZNF706Q9Y5V0 76 aaPredicted RBP13.43□□□□□ -0.26
CHRD-217ENST00000496527 ZNF73O43830 326 aaPredicted RBP13.42□□□□□ -0.26
CHRD-217ENST00000496527 SPRR4Q96PI1 79 aa13.41□□□□□ -0.26
CHRD-217ENST00000496527 PPDPFQ9H3Y8 114 aa13.41□□□□□ -0.26
CHRD-217ENST00000496527 HMCN2Q8NDA2 5059 aa13.4□□□□□ -0.26
CHRD-217ENST00000496527 Q6ZRX8 168 aa13.4□□□□□ -0.26
CHRD-217ENST00000496527 MUSTN1Q8IVN3 82 aa13.4□□□□□ -0.26
CHRD-217ENST00000496527 KRTAP13-2Q52LG2 175 aa13.39□□□□□ -0.27
CHRD-217ENST00000496527 HINT1P49773 126 aaPredicted RBP13.38□□□□□ -0.27
CHRD-217ENST00000496527 JOSD1Q15040 202 aaPredicted RBP13.38□□□□□ -0.27
CHRD-217ENST00000496527 Q9BRP9 147 aa13.36□□□□□ -0.27
CHRD-217ENST00000496527 ERC2-IT1O76042 136 aa13.34□□□□□ -0.27
CHRD-217ENST00000496527 A6NDN8 102 aa13.31□□□□□ -0.28
CHRD-217ENST00000496527 GAGE2AQ6NT46 116 aa13.31□□□□□ -0.28
CHRD-217ENST00000496527 TSPAN13O95857 204 aa13.3□□□□□ -0.28
CHRD-217ENST00000496527 COX8AP10176 69 aa13.3□□□□□ -0.28
CHRD-217ENST00000496527 C3orf22Q8N5N4 141 aa13.3□□□□□ -0.28
CHRD-217ENST00000496527 C6orf99Q4VX62 202 aa13.28□□□□□ -0.28
CHRD-217ENST00000496527 LINC00483Q53H64 154 aa13.28□□□□□ -0.28
CHRD-217ENST00000496527 LINC00304Q8N9R0 145 aa13.28□□□□□ -0.28
CHRD-217ENST00000496527 TRAV13-2A0A0B4J235 113 aa13.27□□□□□ -0.29
CHRD-217ENST00000496527 PAM16Q9Y3D7 125 aa13.27□□□□□ -0.29
CHRD-217ENST00000496527 COX7BP24311 80 aa13.26□□□□□ -0.29
CHRD-217ENST00000496527 SPATA45Q537H7 98 aa13.26□□□□□ -0.29
CHRD-217ENST00000496527 VAMP8Q9BV40 100 aa13.26□□□□□ -0.29
CHRD-217ENST00000496527 TMA7Q9Y2S6 64 aaKnown RBP13.26□□□□□ -0.29
CHRD-217ENST00000496527 DLEU1O43261 78 aa13.25□□□□□ -0.29
CHRD-217ENST00000496527 DHRS4-AS1Q9P1J3 65 aa13.25□□□□□ -0.29
CHRD-217ENST00000496527 ELOF1P60002 83 aaKnown RBP13.24□□□□□ -0.29
CHRD-217ENST00000496527 C14orf144Q96I85 54 aa13.24□□□□□ -0.29
CHRD-217ENST00000496527 HIST1H4GQ99525 98 aa13.23□□□□□ -0.29
CHRD-217ENST00000496527 A4D1N5 150 aa13.22□□□□□ -0.29
CHRD-217ENST00000496527 TRBV7-6A0A0J9YX20 115 aa13.21□□□□□ -0.29
CHRD-217ENST00000496527 ST20-AS1Q8NBB2 130 aa13.2□□□□□ -0.3
CHRD-217ENST00000496527 A0A1B0GWB2 263 aa13.19□□□□□ -0.3
CHRD-217ENST00000496527 IGLV9-49A0A0B4J1Y8 123 aa13.18□□□□□ -0.3
CHRD-217ENST00000496527 PRR4Q16378 134 aa13.18□□□□□ -0.3
CHRD-217ENST00000496527 SLC25A34Q6PIV7 304 aa13.18□□□□□ -0.3
CHRD-217ENST00000496527 SPAG11AQ6PDA7 123 aa13.17□□□□□ -0.3
CHRD-217ENST00000496527 SMIM11BQ8TCY0 68 aa13.17□□□□□ -0.3
CHRD-217ENST00000496527 CTAG1AP78358 180 aa13.16□□□□□ -0.3
CHRD-217ENST00000496527 C4orf48Q5BLP8 95 aa13.16□□□□□ -0.3
CHRD-217ENST00000496527 Q8NBF4 154 aa13.16□□□□□ -0.3
CHRD-217ENST00000496527 MOBPQ13875 183 aa13.15□□□□□ -0.3
CHRD-217ENST00000496527 PYY3Q5JQD4 70 aa13.15□□□□□ -0.3
CHRD-217ENST00000496527 HIGD1BQ9P298 99 aa13.15□□□□□ -0.3
CHRD-217ENST00000496527 SSBP3-AS1Q7Z2R9 100 aa13.12□□□□□ -0.31
CHRD-217ENST00000496527 C12orf57Q99622 126 aa13.12□□□□□ -0.31
CHRD-217ENST00000496527 VAMP3Q15836 100 aa13.11□□□□□ -0.31
CHRD-217ENST00000496527 SPRR1BP22528 89 aa13.1□□□□□ -0.31
CHRD-217ENST00000496527 C9orf153Q5TBE3 101 aa13.1□□□□□ -0.31
CHRD-217ENST00000496527 TAL2Q16559 108 aa13.09□□□□□ -0.31
CHRD-217ENST00000496527 C2orf91Q6ZV80 131 aa13.09□□□□□ -0.31
CHRD-217ENST00000496527 LRP2P98164 4655 aa13.09□□□□□ -0.31
CHRD-217ENST00000496527 DEFB105AQ8NG35 78 aa13.08□□□□□ -0.32
CHRD-217ENST00000496527 NHP2Q9NX24 153 aaKnown RBP13.08□□□□□ -0.32
CHRD-217ENST00000496527 RETNLBQ9BQ08 111 aa13.07□□□□□ -0.32
CHRD-217ENST00000496527 LAMTOR3Q9UHA4 124 aa13.07□□□□□ -0.32
CHRD-217ENST00000496527 SLC25A20O43772 301 aa13.05□□□□□ -0.32
CHRD-217ENST00000496527 SPINK1P00995 79 aa13.05□□□□□ -0.32
CHRD-217ENST00000496527 TEX49A0A1B0GTD5 131 aa13.04□□□□□ -0.32
CHRD-217ENST00000496527 CFC1BP0CG36 223 aa13.03□□□□□ -0.32
CHRD-217ENST00000496527 CFC1P0CG37 223 aa13.03□□□□□ -0.32
CHRD-217ENST00000496527 RAB37Q96AX2 223 aa13.03□□□□□ -0.32
CHRD-217ENST00000496527 CEND1Q8N111 149 aa13.02□□□□□ -0.33
CHRD-217ENST00000496527 H7C2G1 150 aa13□□□□□ -0.33
CHRD-217ENST00000496527 LINC00575Q6W349 94 aa13□□□□□ -0.33
CHRD-217ENST00000496527 UBR4Q5T4S7 5183 aa13□□□□□ -0.33
CHRD-217ENST00000496527 IGLV5-48A0A075B6I7 105 aa12.99□□□□□ -0.33
CHRD-217ENST00000496527 A0A0B4J2C4 111 aa12.99□□□□□ -0.33
CHRD-217ENST00000496527 Q1RN00 199 aa12.99□□□□□ -0.33
CHRD-217ENST00000496527 BVES-AS1Q5T3Y7 98 aa12.99□□□□□ -0.33
CHRD-217ENST00000496527 TMEM238LA0A1B0GVL6 79 aa12.98□□□□□ -0.33
CHRD-217ENST00000496527 A6NJY4 79 aa12.98□□□□□ -0.33
CHRD-217ENST00000496527 LINC01547P58512 204 aaPredicted RBP12.98□□□□□ -0.33
CHRD-217ENST00000496527 hADV29S1A0JD25 119 aa12.96□□□□□ -0.33
CHRD-217ENST00000496527 RPS29P62273 56 aaKnown RBP12.96□□□□□ -0.33
CHRD-217ENST00000496527 IGLV7-46A0A075B6I9 117 aa12.95□□□□□ -0.34
CHRD-217ENST00000496527 LPAP08519 4548 aa12.95□□□□□ -0.34
CHRD-217ENST00000496527 SMIM29Q86T20 159 aa12.94□□□□□ -0.34
CHRD-217ENST00000496527 FXYD2P54710 66 aa12.93□□□□□ -0.34
CHRD-217ENST00000496527 Q8N377 158 aa12.93□□□□□ -0.34
CHRD-217ENST00000496527 UQCR10Q9UDW1 63 aa12.93□□□□□ -0.34
CHRD-217ENST00000496527 HSD52Q0P140 79 aa12.92□□□□□ -0.34
CHRD-217ENST00000496527 Q6ZQY7 126 aa12.91□□□□□ -0.34
CHRD-217ENST00000496527 PRO1933Q9H354 126 aa12.91□□□□□ -0.34
CHRD-217ENST00000496527 PRO1854Q9UHT4 67 aa12.91□□□□□ -0.34
CHRD-217ENST00000496527 FP248Q71RG6 208 aaPredicted RBP12.9□□□□□ -0.34
CHRD-217ENST00000496527 HRCT1Q6UXD1 115 aa12.88□□□□□ -0.35
CHRD-217ENST00000496527 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms