RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 J3QL48 77 aa5.48□□□□□ -1.53
U2AF1-212ENST00000496462 VPS25Q9BRG1 176 aa5.48□□□□□ -1.53
U2AF1-212ENST00000496462 A0A1W2PNN7 141 aa5.48□□□□□ -1.53
U2AF1-212ENST00000496462 XGP55808 180 aa5.48□□□□□ -1.53
U2AF1-212ENST00000496462 ADAMTSL4-AS1Q5T5F5 129 aa5.48□□□□□ -1.53
U2AF1-212ENST00000496462 C6orf99Q4VX62 202 aa5.47□□□□□ -1.53
U2AF1-212ENST00000496462 DNAH10Q8IVF4 4471 aa5.47□□□□□ -1.53
U2AF1-212ENST00000496462 SERTAD4-AS1Q5TG53 156 aa5.47□□□□□ -1.53
U2AF1-212ENST00000496462 SPINK6Q6UWN8 80 aa5.46□□□□□ -1.53
U2AF1-212ENST00000496462 KIAA1109Q2LD37 5005 aa5.46□□□□□ -1.54
U2AF1-212ENST00000496462 TRBV7-6A0A0J9YX20 115 aa5.46□□□□□ -1.54
U2AF1-212ENST00000496462 FAM168BA1KXE4 195 aa5.46□□□□□ -1.54
U2AF1-212ENST00000496462 ATXN8Q156A1 80 aa5.46□□□□□ -1.54
U2AF1-212ENST00000496462 Q5VSD8 79 aa5.46□□□□□ -1.54
U2AF1-212ENST00000496462 LINC00337Q8N6G1 96 aa5.46□□□□□ -1.54
U2AF1-212ENST00000496462 IGLV1-50A0A075B6I6 118 aa5.46□□□□□ -1.54
U2AF1-212ENST00000496462 ZNF861PO60384 105 aa5.46□□□□□ -1.54
U2AF1-212ENST00000496462 IGLV7-43P04211 117 aa5.46□□□□□ -1.54
U2AF1-212ENST00000496462 HAMPP81172 84 aa5.45□□□□□ -1.54
U2AF1-212ENST00000496462 GTF2H5Q6ZYL4 71 aa5.45□□□□□ -1.54
U2AF1-212ENST00000496462 hADV29S1A0JD25 119 aa5.45□□□□□ -1.54
U2AF1-212ENST00000496462 PSORS1C2Q9UIG4 136 aa5.45□□□□□ -1.54
U2AF1-212ENST00000496462 A0A1B0GX51 115 aa5.44□□□□□ -1.54
U2AF1-212ENST00000496462 PRR3P79522 188 aaKnown RBP5.44□□□□□ -1.54
U2AF1-212ENST00000496462 KCNQ1DNQ9H478 68 aa5.44□□□□□ -1.54
U2AF1-212ENST00000496462 CRYGAP11844 174 aa5.44□□□□□ -1.54
U2AF1-212ENST00000496462 C9orf153Q5TBE3 101 aa5.44□□□□□ -1.54
U2AF1-212ENST00000496462 Q8N1X5 172 aa5.44□□□□□ -1.54
U2AF1-212ENST00000496462 DEFB105AQ8NG35 78 aa5.44□□□□□ -1.54
U2AF1-212ENST00000496462 TRBV20-1A0A075B6N2 111 aa5.43□□□□□ -1.54
U2AF1-212ENST00000496462 GAGE2AQ6NT46 116 aa5.43□□□□□ -1.54
U2AF1-212ENST00000496462 Q6ZSA8 131 aa5.43□□□□□ -1.54
U2AF1-212ENST00000496462 FAM30AQ9NZY2 134 aa5.43□□□□□ -1.54
U2AF1-212ENST00000496462 ORMDL1Q9P0S3 153 aa5.42□□□□□ -1.54
U2AF1-212ENST00000496462 SMCR5Q8TEV8 140 aa5.42□□□□□ -1.54
U2AF1-212ENST00000496462 FXYD2P54710 66 aa5.42□□□□□ -1.54
U2AF1-212ENST00000496462 PRLHP81277 87 aa5.42□□□□□ -1.54
U2AF1-212ENST00000496462 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.42□□□□□ -1.54
U2AF1-212ENST00000496462 SMIM11BQ8TCY0 68 aa5.42□□□□□ -1.54
U2AF1-212ENST00000496462 IGLV6-57P01721 117 aa5.41□□□□□ -1.54
U2AF1-212ENST00000496462 FLG2Q5D862 2391 aaPredicted RBP5.41□□□□□ -1.54
U2AF1-212ENST00000496462 UBE2V1Q13404 147 aa5.41□□□□□ -1.54
U2AF1-212ENST00000496462 LITAFQ99732 161 aa5.41□□□□□ -1.54
U2AF1-212ENST00000496462 SOSTDC1Q6X4U4 206 aa5.4□□□□□ -1.54
U2AF1-212ENST00000496462 TEX49A0A1B0GTD5 131 aa5.4□□□□□ -1.54
U2AF1-212ENST00000496462 H0Y9J4 135 aa5.4□□□□□ -1.54
U2AF1-212ENST00000496462 Q6ZRX8 168 aa5.4□□□□□ -1.54
U2AF1-212ENST00000496462 C2orf91Q6ZV80 131 aa5.4□□□□□ -1.54
U2AF1-212ENST00000496462 DNAH2Q9P225 4427 aa5.4□□□□□ -1.55
U2AF1-212ENST00000496462 PPDPFLQ8WWR9 84 aa5.4□□□□□ -1.55
U2AF1-212ENST00000496462 H3BUT2 72 aa5.4□□□□□ -1.55
U2AF1-212ENST00000496462 PKHD1P08F94 4074 aa5.39□□□□□ -1.55
U2AF1-212ENST00000496462 TMEM256-PLSCR3K7ERE1 68 aa5.38□□□□□ -1.55
U2AF1-212ENST00000496462 ELOF1P60002 83 aaKnown RBP5.37□□□□□ -1.55
U2AF1-212ENST00000496462 TYMSOSQ8TAI1 123 aa5.37□□□□□ -1.55
U2AF1-212ENST00000496462 K7ERJ3 54 aa5.37□□□□□ -1.55
U2AF1-212ENST00000496462 Q6JHZ5 121 aa5.37□□□□□ -1.55
U2AF1-212ENST00000496462 SPCS1Q9Y6A9 102 aa5.37□□□□□ -1.55
U2AF1-212ENST00000496462 DNAH11Q96DT5 4516 aa5.36□□□□□ -1.55
U2AF1-212ENST00000496462 DNAH6Q9C0G6 4158 aa5.36□□□□□ -1.55
U2AF1-212ENST00000496462 SRRM2Q9UQ35 2752 aaKnown RBP5.36□□□□□ -1.55
U2AF1-212ENST00000496462 TRACP01848 142 aa5.36□□□□□ -1.55
U2AF1-212ENST00000496462 Q6ZQY7 126 aa5.36□□□□□ -1.55
U2AF1-212ENST00000496462 HECTD4Q9Y4D8 3996 aa5.36□□□□□ -1.55
U2AF1-212ENST00000496462 C9orf118A6NHY6 69 aa5.36□□□□□ -1.55
U2AF1-212ENST00000496462 PANO1I0J062 215 aa5.36□□□□□ -1.55
U2AF1-212ENST00000496462 SPAG11AQ6PDA7 123 aa5.36□□□□□ -1.55
U2AF1-212ENST00000496462 DSCR8Q96T75 97 aa5.36□□□□□ -1.55
U2AF1-212ENST00000496462 OXTP01178 125 aa5.35□□□□□ -1.55
U2AF1-212ENST00000496462 FAT2Q9NYQ8 4349 aa5.35□□□□□ -1.55
U2AF1-212ENST00000496462 IGLV9-49A0A0B4J1Y8 123 aa5.35□□□□□ -1.55
U2AF1-212ENST00000496462 B5MCH6 92 aa5.35□□□□□ -1.55
U2AF1-212ENST00000496462 FAM229BQ4G0N7 80 aa5.35□□□□□ -1.55
U2AF1-212ENST00000496462 LINC00575Q6W349 94 aa5.35□□□□□ -1.55
U2AF1-212ENST00000496462 A0A1B0GV72 72 aa5.35□□□□□ -1.55
U2AF1-212ENST00000496462 LIMD2Q9BT23 127 aa5.34□□□□□ -1.55
U2AF1-212ENST00000496462 TCL1BO95988 128 aa5.34□□□□□ -1.55
U2AF1-212ENST00000496462 PDE6GP18545 87 aa5.34□□□□□ -1.55
U2AF1-212ENST00000496462 Q9BRP9 147 aa5.34□□□□□ -1.55
U2AF1-212ENST00000496462 SS18L2Q9UHA2 77 aa5.34□□□□□ -1.55
U2AF1-212ENST00000496462 DYNC1H1Q14204 4646 aaKnown RBP5.34□□□□□ -1.55
U2AF1-212ENST00000496462 DMBT1Q9UGM3 2413 aaPredicted RBP5.34□□□□□ -1.55
U2AF1-212ENST00000496462 JMJD7-PLA2G4BH0Y9G9 81 aa5.34□□□□□ -1.56
U2AF1-212ENST00000496462 SSBP3-AS1Q7Z2R9 100 aa5.34□□□□□ -1.56
U2AF1-212ENST00000496462 KRTAP4-5Q9BYR2 181 aa5.34□□□□□ -1.56
U2AF1-212ENST00000496462 DNAH17Q9UFH2 4485 aa5.34□□□□□ -1.56
U2AF1-212ENST00000496462 TAX1BP3O14907 124 aa5.33□□□□□ -1.56
U2AF1-212ENST00000496462 BAALC-AS2P0C853 105 aa5.33□□□□□ -1.56
U2AF1-212ENST00000496462 J3QR89 54 aa5.33□□□□□ -1.56
U2AF1-212ENST00000496462 TRIAP1O43715 76 aa5.33□□□□□ -1.56
U2AF1-212ENST00000496462 ANKRD29Q8N6D5 301 aa5.33□□□□□ -1.56
U2AF1-212ENST00000496462 Q8NBF4 154 aa5.33□□□□□ -1.56
U2AF1-212ENST00000496462 HERC2O95714 4834 aa5.32□□□□□ -1.56
U2AF1-212ENST00000496462 C9JAW5 83 aa5.32□□□□□ -1.56
U2AF1-212ENST00000496462 H3BMG7 143 aa5.31□□□□□ -1.56
U2AF1-212ENST00000496462 SPRR1AP35321 89 aa5.31□□□□□ -1.56
U2AF1-212ENST00000496462 DNAH5Q8TE73 4624 aa5.31□□□□□ -1.56
U2AF1-212ENST00000496462 SPRR4Q96PI1 79 aa5.31□□□□□ -1.56
U2AF1-212ENST00000496462 KRTAP17-1Q9BYP8 105 aa5.31□□□□□ -1.56
U2AF1-212ENST00000496462 LRP1BQ9NZR2 4599 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 227 ms