RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 SYS1-DBNDD2H3BUS1 97 aa7.28□□□□□ -1.24
PTPRF-214ENST00000496043 ERC2-IT1O76042 136 aa7.28□□□□□ -1.24
PTPRF-214ENST00000496043 SPINK1P00995 79 aa7.28□□□□□ -1.24
PTPRF-214ENST00000496043 IGLV6-57P01721 117 aa7.28□□□□□ -1.24
PTPRF-214ENST00000496043 JOSD1Q15040 202 aaPredicted RBP7.28□□□□□ -1.24
PTPRF-214ENST00000496043 ADAMTSL4-AS1Q5T5F5 129 aa7.28□□□□□ -1.24
PTPRF-214ENST00000496043 SSBP3-AS1Q7Z2R9 100 aa7.28□□□□□ -1.24
PTPRF-214ENST00000496043 S100A6P06703 90 aa7.27□□□□□ -1.25
PTPRF-214ENST00000496043 NPC2P61916 151 aa7.27□□□□□ -1.25
PTPRF-214ENST00000496043 Q6ZRX8 168 aa7.27□□□□□ -1.25
PTPRF-214ENST00000496043 FP248Q71RG6 208 aaPredicted RBP7.27□□□□□ -1.25
PTPRF-214ENST00000496043 HIST1H2BLQ99880 126 aa7.27□□□□□ -1.25
PTPRF-214ENST00000496043 MUC2Q02817 5179 aa7.26□□□□□ -1.25
PTPRF-214ENST00000496043 TRAV23DV6A0A075B6W5 121 aa7.26□□□□□ -1.25
PTPRF-214ENST00000496043 SOSTDC1Q6X4U4 206 aa7.26□□□□□ -1.25
PTPRF-214ENST00000496043 Q9BRP9 147 aa7.26□□□□□ -1.25
PTPRF-214ENST00000496043 CBY1Q9Y3M2 126 aa7.26□□□□□ -1.25
PTPRF-214ENST00000496043 IGLV9-49A0A0B4J1Y8 123 aa7.25□□□□□ -1.25
PTPRF-214ENST00000496043 HINT1P49773 126 aaPredicted RBP7.25□□□□□ -1.25
PTPRF-214ENST00000496043 PET117Q6UWS5 81 aa7.25□□□□□ -1.25
PTPRF-214ENST00000496043 ZNF73O43830 326 aaPredicted RBP7.24□□□□□ -1.25
PTPRF-214ENST00000496043 EIF4EBP3O60516 100 aaPredicted RBP7.24□□□□□ -1.25
PTPRF-214ENST00000496043 C3orf79P0CE67 100 aa7.24□□□□□ -1.25
PTPRF-214ENST00000496043 MOBPQ13875 183 aa7.24□□□□□ -1.25
PTPRF-214ENST00000496043 LINC01545Q5VT33 79 aa7.24□□□□□ -1.25
PTPRF-214ENST00000496043 TIMM17BO60830 172 aa7.23□□□□□ -1.25
PTPRF-214ENST00000496043 LINC00308Q8TCZ7 52 aa7.23□□□□□ -1.25
PTPRF-214ENST00000496043 S100A2P29034 98 aa7.22□□□□□ -1.25
PTPRF-214ENST00000496043 KRTDAPP60985 99 aa7.22□□□□□ -1.25
PTPRF-214ENST00000496043 OR13C6PQ8NH95 151 aa7.22□□□□□ -1.25
PTPRF-214ENST00000496043 LITAFQ99732 161 aa7.21□□□□□ -1.26
PTPRF-214ENST00000496043 SPANXCQ9NY87 97 aa7.21□□□□□ -1.26
PTPRF-214ENST00000496043 ZNF815PA8K554 130 aa7.2□□□□□ -1.26
PTPRF-214ENST00000496043 RPS29P62273 56 aaKnown RBP7.2□□□□□ -1.26
PTPRF-214ENST00000496043 MUC17Q685J3 4493 aa7.19□□□□□ -1.26
PTPRF-214ENST00000496043 LINC00518Q8N0U6 118 aa7.19□□□□□ -1.26
PTPRF-214ENST00000496043 ST20-AS1Q8NBB2 130 aa7.19□□□□□ -1.26
PTPRF-214ENST00000496043 SLC25A20O43772 301 aa7.18□□□□□ -1.26
PTPRF-214ENST00000496043 KRTAP13-3Q3SY46 172 aa7.18□□□□□ -1.26
PTPRF-214ENST00000496043 C9orf153Q5TBE3 101 aa7.18□□□□□ -1.26
PTPRF-214ENST00000496043 SPANXDQ9BXN6 97 aa7.18□□□□□ -1.26
PTPRF-214ENST00000496043 Q8N377 158 aa7.17□□□□□ -1.26
PTPRF-214ENST00000496043 DHRS4-AS1Q9P1J3 65 aa7.17□□□□□ -1.26
PTPRF-214ENST00000496043 SLC25A34Q6PIV7 304 aa7.16□□□□□ -1.26
PTPRF-214ENST00000496043 TTTY13Q9BZ97 58 aa7.16□□□□□ -1.26
PTPRF-214ENST00000496043 ATOH7Q8N100 152 aa7.15□□□□□ -1.26
PTPRF-214ENST00000496043 C20orf202A1L168 122 aa7.14□□□□□ -1.27
PTPRF-214ENST00000496043 SPRR1BP22528 89 aa7.14□□□□□ -1.27
PTPRF-214ENST00000496043 COX7BP24311 80 aa7.14□□□□□ -1.27
PTPRF-214ENST00000496043 SCGB1D4Q6XE38 83 aa7.14□□□□□ -1.27
PTPRF-214ENST00000496043 COPS9Q8WXC6 57 aa7.14□□□□□ -1.27
PTPRF-214ENST00000496043 LAMTOR3Q9UHA4 124 aa7.13□□□□□ -1.27
PTPRF-214ENST00000496043 IFITM1P13164 125 aa7.12□□□□□ -1.27
PTPRF-214ENST00000496043 AKR1D1P51857 326 aa7.12□□□□□ -1.27
PTPRF-214ENST00000496043 ELOF1P60002 83 aaKnown RBP7.12□□□□□ -1.27
PTPRF-214ENST00000496043 TAL2Q16559 108 aa7.12□□□□□ -1.27
PTPRF-214ENST00000496043 ASB16-AS1Q495Z4 193 aa7.12□□□□□ -1.27
PTPRF-214ENST00000496043 C6orf99Q4VX62 202 aa7.12□□□□□ -1.27
PTPRF-214ENST00000496043 FAT4Q6V0I7 4981 aa7.12□□□□□ -1.27
PTPRF-214ENST00000496043 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
PTPRF-214ENST00000496043 LCE2AQ5TA79 106 aaPredicted RBP7.11□□□□□ -1.27
PTPRF-214ENST00000496043 Q6ZVH6 145 aa7.11□□□□□ -1.27
PTPRF-214ENST00000496043 TRBV7-6A0A0J9YX20 115 aa7.1□□□□□ -1.27
PTPRF-214ENST00000496043 SCGB1D1O95968 90 aa7.1□□□□□ -1.27
PTPRF-214ENST00000496043 ANKRD39Q53RE8 183 aa7.1□□□□□ -1.27
PTPRF-214ENST00000496043 DEFB105AQ8NG35 78 aa7.1□□□□□ -1.27
PTPRF-214ENST00000496043 A6NDN8 102 aa7.09□□□□□ -1.27
PTPRF-214ENST00000496043 PYY3Q5JQD4 70 aa7.09□□□□□ -1.27
PTPRF-214ENST00000496043 MUSTN1Q8IVN3 82 aa7.09□□□□□ -1.27
PTPRF-214ENST00000496043 TEX49A0A1B0GTD5 131 aa7.08□□□□□ -1.28
PTPRF-214ENST00000496043 HRCT1Q6UXD1 115 aa7.08□□□□□ -1.28
PTPRF-214ENST00000496043 LIMD2Q9BT23 127 aa7.08□□□□□ -1.28
PTPRF-214ENST00000496043 A0A1B0GWB2 263 aa7.07□□□□□ -1.28
PTPRF-214ENST00000496043 LOC105371267A0A1B0GV96 52 aa7.06□□□□□ -1.28
PTPRF-214ENST00000496043 PCP2Q8IVA1 136 aa7.06□□□□□ -1.28
PTPRF-214ENST00000496043 PRO1933Q9H354 126 aa7.06□□□□□ -1.28
PTPRF-214ENST00000496043 TRAV13-2A0A0B4J235 113 aa7.05□□□□□ -1.28
PTPRF-214ENST00000496043 Q1RN00 199 aa7.05□□□□□ -1.28
PTPRF-214ENST00000496043 XP32Q5T750 250 aa7.05□□□□□ -1.28
PTPRF-214ENST00000496043 A4D1N5 150 aa7.04□□□□□ -1.28
PTPRF-214ENST00000496043 CD164Q04900 197 aa7.04□□□□□ -1.28
PTPRF-214ENST00000496043 H7C2G1 150 aa7.02□□□□□ -1.29
PTPRF-214ENST00000496043 SMIM29Q86T20 159 aa7.02□□□□□ -1.29
PTPRF-214ENST00000496043 KRTAP4-1Q9BYQ7 146 aa7.02□□□□□ -1.29
PTPRF-214ENST00000496043 NHP2Q9NX24 153 aaKnown RBP7.02□□□□□ -1.29
PTPRF-214ENST00000496043 PAM16Q9Y3D7 125 aa7.02□□□□□ -1.29
PTPRF-214ENST00000496043 HSBP1L1C9JCN9 74 aa7.01□□□□□ -1.29
PTPRF-214ENST00000496043 LINC01547P58512 204 aaPredicted RBP7.01□□□□□ -1.29
PTPRF-214ENST00000496043 SMIM11BQ8TCY0 68 aa7.01□□□□□ -1.29
PTPRF-214ENST00000496043 IGLV5-48A0A075B6I7 105 aa7□□□□□ -1.29
PTPRF-214ENST00000496043 VAMP3Q15836 100 aa7□□□□□ -1.29
PTPRF-214ENST00000496043 SPATA45Q537H7 98 aa7□□□□□ -1.29
PTPRF-214ENST00000496043 VAMP8Q9BV40 100 aa7□□□□□ -1.29
PTPRF-214ENST00000496043 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
PTPRF-214ENST00000496043 Q5XG85 94 aa6.98□□□□□ -1.29
PTPRF-214ENST00000496043 C9orf92A6NGG3 77 aa6.97□□□□□ -1.29
PTPRF-214ENST00000496043 C14orf144Q96I85 54 aa6.97□□□□□ -1.29
PTPRF-214ENST00000496043 SMIM6P0DI80 62 aa6.96□□□□□ -1.3
PTPRF-214ENST00000496043 COX8AP10176 69 aa6.96□□□□□ -1.3
PTPRF-214ENST00000496043 A0A0G2JQZ4 141 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 633 ms