RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 H0Y9J4 135 aa8.96□□□□□ -0.98
HDAC9-226ENST00000496026 SPRR1AP35321 89 aa8.96□□□□□ -0.98
HDAC9-226ENST00000496026 TAL2Q16559 108 aa8.96□□□□□ -0.98
HDAC9-226ENST00000496026 VPS13BQ7Z7G8 4022 aa8.95□□□□□ -0.98
HDAC9-226ENST00000496026 ZNF73O43830 326 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-226ENST00000496026 KRTAP13-1Q8IUC0 172 aa8.95□□□□□ -0.98
HDAC9-226ENST00000496026 PRO1933Q9H354 126 aa8.95□□□□□ -0.98
HDAC9-226ENST00000496026 HINT1P49773 126 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-226ENST00000496026 CEND1Q8N111 149 aa8.94□□□□□ -0.98
HDAC9-226ENST00000496026 C12orf57Q99622 126 aa8.94□□□□□ -0.98
HDAC9-226ENST00000496026 KRTAP4-16G5E9R7 235 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-226ENST00000496026 HIGD2AQ9BW72 106 aa8.93□□□□□ -0.98
HDAC9-226ENST00000496026 B5MCH6 92 aa8.92□□□□□ -0.98
HDAC9-226ENST00000496026 HSD52Q0P140 79 aa8.92□□□□□ -0.98
HDAC9-226ENST00000496026 TMEM238LA0A1B0GVL6 79 aa8.91□□□□□ -0.98
HDAC9-226ENST00000496026 A6NJY4 79 aa8.91□□□□□ -0.98
HDAC9-226ENST00000496026 OXTP01178 125 aa8.91□□□□□ -0.98
HDAC9-226ENST00000496026 C6orf99Q4VX62 202 aa8.9□□□□□ -0.98
HDAC9-226ENST00000496026 Q6ZRX8 168 aa8.9□□□□□ -0.98
HDAC9-226ENST00000496026 RAB37Q96AX2 223 aa8.9□□□□□ -0.98
HDAC9-226ENST00000496026 CFC1BP0CG36 223 aa8.89□□□□□ -0.99
HDAC9-226ENST00000496026 CFC1P0CG37 223 aa8.89□□□□□ -0.99
HDAC9-226ENST00000496026 RPL13AP40429 203 aaKnown RBP8.89□□□□□ -0.99
HDAC9-226ENST00000496026 ABCA13Q86UQ4 5058 aa8.88□□□□□ -0.99
HDAC9-226ENST00000496026 KRTAP29-1A8MX34 341 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-226ENST00000496026 FXYD2P54710 66 aa8.88□□□□□ -0.99
HDAC9-226ENST00000496026 SMIM11BQ8TCY0 68 aa8.88□□□□□ -0.99
HDAC9-226ENST00000496026 A0A0B4J2C4 111 aa8.87□□□□□ -0.99
HDAC9-226ENST00000496026 TSTD3H0UI37 97 aa8.87□□□□□ -0.99
HDAC9-226ENST00000496026 J3QL48 77 aa8.87□□□□□ -0.99
HDAC9-226ENST00000496026 COX7BP24311 80 aa8.87□□□□□ -0.99
HDAC9-226ENST00000496026 SMCR5Q8TEV8 140 aa8.87□□□□□ -0.99
HDAC9-226ENST00000496026 KRTAP3-3Q9BYR6 98 aa8.87□□□□□ -0.99
HDAC9-226ENST00000496026 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
HDAC9-226ENST00000496026 LINC01600Q96MT4 127 aa8.86□□□□□ -0.99
HDAC9-226ENST00000496026 PCLOQ9Y6V0 5065 aa8.86□□□□□ -0.99
HDAC9-226ENST00000496026 FLG2Q5D862 2391 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-226ENST00000496026 TRBV7-6A0A0J9YX20 115 aa8.85□□□□□ -0.99
HDAC9-226ENST00000496026 H7C2G1 150 aa8.85□□□□□ -0.99
HDAC9-226ENST00000496026 ELOF1P60002 83 aaKnown RBP8.85□□□□□ -0.99
HDAC9-226ENST00000496026 Q9BRP9 147 aa8.85□□□□□ -0.99
HDAC9-226ENST00000496026 A0A1B0GWB2 263 aa8.84□□□□□ -0.99
HDAC9-226ENST00000496026 KRTAP1-4P0C5Y4 121 aa8.84□□□□□ -0.99
HDAC9-226ENST00000496026 VAMP3Q15836 100 aa8.84□□□□□ -0.99
HDAC9-226ENST00000496026 NHP2Q9NX24 153 aaKnown RBP8.84□□□□□ -0.99
HDAC9-226ENST00000496026 ZNF706Q9Y5V0 76 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-226ENST00000496026 DHRS4-AS1Q9P1J3 65 aa8.83□□□□□ -1
HDAC9-226ENST00000496026 PRO1854Q9UHT4 67 aa8.83□□□□□ -1
HDAC9-226ENST00000496026 PKHD1L1Q86WI1 4243 aa8.82□□□□□ -1
HDAC9-226ENST00000496026 ERC2-IT1O76042 136 aa8.82□□□□□ -1
HDAC9-226ENST00000496026 CTAG1AP78358 180 aa8.82□□□□□ -1
HDAC9-226ENST00000496026 Q1RN00 199 aa8.82□□□□□ -1
HDAC9-226ENST00000496026 BVES-AS1Q5T3Y7 98 aa8.81□□□□□ -1
HDAC9-226ENST00000496026 PRR26Q8N8Z3 221 aa8.81□□□□□ -1
HDAC9-226ENST00000496026 SPRR4Q96PI1 79 aa8.81□□□□□ -1
HDAC9-226ENST00000496026 ANAPC11Q9NYG5 84 aa8.81□□□□□ -1
HDAC9-226ENST00000496026 K7ERJ3 54 aa8.79□□□□□ -1
HDAC9-226ENST00000496026 M0R143 59 aa8.79□□□□□ -1
HDAC9-226ENST00000496026 CRYGAP11844 174 aa8.79□□□□□ -1
HDAC9-226ENST00000496026 MT1HL1P0DM35 61 aa8.78□□□□□ -1
HDAC9-226ENST00000496026 FAM229BQ4G0N7 80 aa8.78□□□□□ -1
HDAC9-226ENST00000496026 GAGE2AQ6NT46 116 aa8.78□□□□□ -1
HDAC9-226ENST00000496026 SLC25A20O43772 301 aa8.77□□□□□ -1.01
HDAC9-226ENST00000496026 KRTAP10-8P60410 259 aa8.77□□□□□ -1.01
HDAC9-226ENST00000496026 A0A087X002 238 aa8.76□□□□□ -1.01
HDAC9-226ENST00000496026 ST20-AS1Q8NBB2 130 aa8.76□□□□□ -1.01
HDAC9-226ENST00000496026 LINC00575Q6W349 94 aa8.75□□□□□ -1.01
HDAC9-226ENST00000496026 PSMB2P49721 201 aa8.74□□□□□ -1.01
HDAC9-226ENST00000496026 LINC00483Q53H64 154 aa8.74□□□□□ -1.01
HDAC9-226ENST00000496026 TYMSOSQ8TAI1 123 aa8.74□□□□□ -1.01
HDAC9-226ENST00000496026 MYCBP2O75592 4640 aa8.74□□□□□ -1.01
HDAC9-226ENST00000496026 hADV29S1A0JD25 119 aa8.73□□□□□ -1.01
HDAC9-226ENST00000496026 DEFB105AQ8NG35 78 aa8.73□□□□□ -1.01
HDAC9-226ENST00000496026 H0YGX0 51 aa8.72□□□□□ -1.01
HDAC9-226ENST00000496026 TRIAP1O43715 76 aa8.71□□□□□ -1.02
HDAC9-226ENST00000496026 TSPAN13O95857 204 aa8.71□□□□□ -1.02
HDAC9-226ENST00000496026 BATFQ16520 125 aa8.71□□□□□ -1.02
HDAC9-226ENST00000496026 KRTAP13-2Q52LG2 175 aa8.71□□□□□ -1.02
HDAC9-226ENST00000496026 SNCGO76070 127 aa8.7□□□□□ -1.02
HDAC9-226ENST00000496026 C3orf22Q8N5N4 141 aa8.7□□□□□ -1.02
HDAC9-226ENST00000496026 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
HDAC9-226ENST00000496026 COX6CP09669 75 aa8.69□□□□□ -1.02
HDAC9-226ENST00000496026 IGLV9-49A0A0B4J1Y8 123 aa8.68□□□□□ -1.02
HDAC9-226ENST00000496026 TEX49A0A1B0GTD5 131 aa8.68□□□□□ -1.02
HDAC9-226ENST00000496026 SPRR1BP22528 89 aa8.67□□□□□ -1.02
HDAC9-226ENST00000496026 Q6ZQY7 126 aa8.67□□□□□ -1.02
HDAC9-226ENST00000496026 LAMTOR3Q9UHA4 124 aa8.67□□□□□ -1.02
HDAC9-226ENST00000496026 FAT3Q8TDW7 4589 aa8.66□□□□□ -1.02
HDAC9-226ENST00000496026 IGLV5-48A0A075B6I7 105 aa8.66□□□□□ -1.02
HDAC9-226ENST00000496026 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-226ENST00000496026 FAM218AQ96MZ4 157 aa8.66□□□□□ -1.02
HDAC9-226ENST00000496026 SCGB1C2P0DMR2 95 aa8.65□□□□□ -1.02
HDAC9-226ENST00000496026 MOBPQ13875 183 aa8.65□□□□□ -1.02
HDAC9-226ENST00000496026 C9orf153Q5TBE3 101 aa8.65□□□□□ -1.02
HDAC9-226ENST00000496026 LINC01547P58512 204 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-226ENST00000496026 CLEC2BQ92478 149 aa8.64□□□□□ -1.03
HDAC9-226ENST00000496026 DMBT1Q9UGM3 2413 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-226ENST00000496026 A0A1B0GX51 115 aa8.63□□□□□ -1.03
HDAC9-226ENST00000496026 Q8N377 158 aa8.63□□□□□ -1.03
HDAC9-226ENST00000496026 LINC00304Q8N9R0 145 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms