RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 PCP2Q8IVA1 136 aa8.43□□□□□ -1.06
SCAP-213ENST00000494938 TYMSOSQ8TAI1 123 aa8.43□□□□□ -1.06
SCAP-213ENST00000494938 SMCR5Q8TEV8 140 aa8.43□□□□□ -1.06
SCAP-213ENST00000494938 S100A7L2Q5SY68 101 aa8.42□□□□□ -1.06
SCAP-213ENST00000494938 SPRR4Q96PI1 79 aa8.42□□□□□ -1.06
SCAP-213ENST00000494938 LPAP08519 4548 aa8.42□□□□□ -1.06
SCAP-213ENST00000494938 S100A12P80511 92 aa8.41□□□□□ -1.06
SCAP-213ENST00000494938 SPANXCQ9NY87 97 aa8.41□□□□□ -1.06
SCAP-213ENST00000494938 C5orf52A6NGY3 159 aa8.4□□□□□ -1.06
SCAP-213ENST00000494938 SPANXDQ9BXN6 97 aa8.4□□□□□ -1.06
SCAP-213ENST00000494938 TRAV23DV6A0A075B6W5 121 aa8.39□□□□□ -1.07
SCAP-213ENST00000494938 ERC2-IT1O76042 136 aa8.39□□□□□ -1.07
SCAP-213ENST00000494938 SCGB1D4Q6XE38 83 aa8.39□□□□□ -1.07
SCAP-213ENST00000494938 Q9BRP9 147 aa8.39□□□□□ -1.07
SCAP-213ENST00000494938 TSPAN13O95857 204 aa8.38□□□□□ -1.07
SCAP-213ENST00000494938 C3orf22Q8N5N4 141 aa8.38□□□□□ -1.07
SCAP-213ENST00000494938 ZNF73O43830 326 aaPredicted RBP8.37□□□□□ -1.07
SCAP-213ENST00000494938 Q6ZRX8 168 aa8.37□□□□□ -1.07
SCAP-213ENST00000494938 OR13C6PQ8NH95 151 aa8.36□□□□□ -1.07
SCAP-213ENST00000494938 ZNF706Q9Y5V0 76 aaPredicted RBP8.36□□□□□ -1.07
SCAP-213ENST00000494938 IFITM1P13164 125 aa8.35□□□□□ -1.07
SCAP-213ENST00000494938 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
SCAP-213ENST00000494938 Q6ZVH6 145 aa8.35□□□□□ -1.07
SCAP-213ENST00000494938 MUSTN1Q8IVN3 82 aa8.35□□□□□ -1.07
SCAP-213ENST00000494938 LINC00518Q8N0U6 118 aa8.35□□□□□ -1.07
SCAP-213ENST00000494938 PPDPFQ9H3Y8 114 aa8.35□□□□□ -1.07
SCAP-213ENST00000494938 SCGB1D1O95968 90 aa8.33□□□□□ -1.08
SCAP-213ENST00000494938 LINC00304Q8N9R0 145 aa8.33□□□□□ -1.08
SCAP-213ENST00000494938 CBY1Q9Y3M2 126 aa8.33□□□□□ -1.08
SCAP-213ENST00000494938 HSBP1L1C9JCN9 74 aa8.32□□□□□ -1.08
SCAP-213ENST00000494938 GAGE2AQ6NT46 116 aa8.32□□□□□ -1.08
SCAP-213ENST00000494938 RNF213Q63HN8 5207 aa8.32□□□□□ -1.08
SCAP-213ENST00000494938 JOSD1Q15040 202 aaPredicted RBP8.31□□□□□ -1.08
SCAP-213ENST00000494938 COPS9Q8WXC6 57 aa8.31□□□□□ -1.08
SCAP-213ENST00000494938 HINT1P49773 126 aaPredicted RBP8.3□□□□□ -1.08
SCAP-213ENST00000494938 PRR4Q16378 134 aa8.3□□□□□ -1.08
SCAP-213ENST00000494938 ST20-AS1Q8NBB2 130 aa8.29□□□□□ -1.08
SCAP-213ENST00000494938 CTAG1AP78358 180 aa8.28□□□□□ -1.08
SCAP-213ENST00000494938 C6orf99Q4VX62 202 aa8.27□□□□□ -1.09
SCAP-213ENST00000494938 A6NDN8 102 aa8.26□□□□□ -1.09
SCAP-213ENST00000494938 COX7BP24311 80 aa8.26□□□□□ -1.09
SCAP-213ENST00000494938 ELOF1P60002 83 aaKnown RBP8.26□□□□□ -1.09
SCAP-213ENST00000494938 SPAG11AQ6PDA7 123 aa8.26□□□□□ -1.09
SCAP-213ENST00000494938 Q8NBF4 154 aa8.26□□□□□ -1.09
SCAP-213ENST00000494938 TRBV7-6A0A0J9YX20 115 aa8.25□□□□□ -1.09
SCAP-213ENST00000494938 COX8AP10176 69 aa8.25□□□□□ -1.09
SCAP-213ENST00000494938 SMCPP49901 116 aaPredicted RBP8.25□□□□□ -1.09
SCAP-213ENST00000494938 DHRS4-AS1Q9P1J3 65 aa8.25□□□□□ -1.09
SCAP-213ENST00000494938 TRAV13-2A0A0B4J235 113 aa8.24□□□□□ -1.09
SCAP-213ENST00000494938 SSBP3-AS1Q7Z2R9 100 aa8.24□□□□□ -1.09
SCAP-213ENST00000494938 IGLV9-49A0A0B4J1Y8 123 aa8.23□□□□□ -1.09
SCAP-213ENST00000494938 DLEU1O43261 78 aa8.23□□□□□ -1.09
SCAP-213ENST00000494938 RETNLBQ9BQ08 111 aa8.23□□□□□ -1.09
SCAP-213ENST00000494938 A4D1N5 150 aa8.22□□□□□ -1.09
SCAP-213ENST00000494938 SPRR1BP22528 89 aa8.22□□□□□ -1.09
SCAP-213ENST00000494938 MOBPQ13875 183 aa8.22□□□□□ -1.09
SCAP-213ENST00000494938 C4orf48Q5BLP8 95 aa8.22□□□□□ -1.09
SCAP-213ENST00000494938 SMIM11BQ8TCY0 68 aa8.22□□□□□ -1.09
SCAP-213ENST00000494938 C14orf144Q96I85 54 aa8.21□□□□□ -1.1
SCAP-213ENST00000494938 A0A1B0GWB2 263 aa8.2□□□□□ -1.1
SCAP-213ENST00000494938 PAM16Q9Y3D7 125 aa8.2□□□□□ -1.1
SCAP-213ENST00000494938 SPINK1P00995 79 aa8.19□□□□□ -1.1
SCAP-213ENST00000494938 SPATA45Q537H7 98 aa8.19□□□□□ -1.1
SCAP-213ENST00000494938 HIST1H4GQ99525 98 aa8.18□□□□□ -1.1
SCAP-213ENST00000494938 LINC01547P58512 204 aaPredicted RBP8.16□□□□□ -1.1
SCAP-213ENST00000494938 TAL2Q16559 108 aa8.16□□□□□ -1.1
SCAP-213ENST00000494938 DEFB105AQ8NG35 78 aa8.16□□□□□ -1.1
SCAP-213ENST00000494938 VAMP8Q9BV40 100 aa8.16□□□□□ -1.1
SCAP-213ENST00000494938 IGLV7-46A0A075B6I9 117 aa8.15□□□□□ -1.1
SCAP-213ENST00000494938 C9orf153Q5TBE3 101 aa8.15□□□□□ -1.1
SCAP-213ENST00000494938 C2orf91Q6ZV80 131 aa8.15□□□□□ -1.1
SCAP-213ENST00000494938 HIGD1BQ9P298 99 aa8.15□□□□□ -1.1
SCAP-213ENST00000494938 TEX49A0A1B0GTD5 131 aa8.14□□□□□ -1.11
SCAP-213ENST00000494938 SLC25A34Q6PIV7 304 aa8.14□□□□□ -1.11
SCAP-213ENST00000494938 SMIM29Q86T20 159 aa8.14□□□□□ -1.11
SCAP-213ENST00000494938 C12orf57Q99622 126 aa8.14□□□□□ -1.11
SCAP-213ENST00000494938 LAMTOR3Q9UHA4 124 aa8.14□□□□□ -1.11
SCAP-213ENST00000494938 MUC17Q685J3 4493 aa8.13□□□□□ -1.11
SCAP-213ENST00000494938 IGLV5-48A0A075B6I7 105 aa8.13□□□□□ -1.11
SCAP-213ENST00000494938 RPS29P62273 56 aaKnown RBP8.13□□□□□ -1.11
SCAP-213ENST00000494938 PYY3Q5JQD4 70 aa8.13□□□□□ -1.11
SCAP-213ENST00000494938 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
SCAP-213ENST00000494938 MUC2Q02817 5179 aa8.13□□□□□ -1.11
SCAP-213ENST00000494938 CFC1BP0CG36 223 aa8.12□□□□□ -1.11
SCAP-213ENST00000494938 CFC1P0CG37 223 aa8.12□□□□□ -1.11
SCAP-213ENST00000494938 VAMP3Q15836 100 aa8.12□□□□□ -1.11
SCAP-213ENST00000494938 LINC00575Q6W349 94 aa8.12□□□□□ -1.11
SCAP-213ENST00000494938 Q8N377 158 aa8.12□□□□□ -1.11
SCAP-213ENST00000494938 TMA7Q9Y2S6 64 aaKnown RBP8.12□□□□□ -1.11
SCAP-213ENST00000494938 TPRXLQ17RH7 258 aa8.11□□□□□ -1.11
SCAP-213ENST00000494938 FP248Q71RG6 208 aaPredicted RBP8.11□□□□□ -1.11
SCAP-213ENST00000494938 Q1RN00 199 aa8.1□□□□□ -1.11
SCAP-213ENST00000494938 NHP2Q9NX24 153 aaKnown RBP8.09□□□□□ -1.11
SCAP-213ENST00000494938 hADV29S1A0JD25 119 aa8.07□□□□□ -1.12
SCAP-213ENST00000494938 SLC25A20O43772 301 aa8.07□□□□□ -1.12
SCAP-213ENST00000494938 CEND1Q8N111 149 aa8.07□□□□□ -1.12
SCAP-213ENST00000494938 HRCT1Q6UXD1 115 aa8.06□□□□□ -1.12
SCAP-213ENST00000494938 PRO1933Q9H354 126 aa8.06□□□□□ -1.12
SCAP-213ENST00000494938 A0A0B4J2C4 111 aa8.05□□□□□ -1.12
SCAP-213ENST00000494938 H7C2G1 150 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms