RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 KRTAP13-2Q52LG2 175 aa10.58□□□□□ -0.72
COL20A1-207ENST00000494913 LINC00308Q8TCZ7 52 aa10.58□□□□□ -0.72
COL20A1-207ENST00000494913 HIGD2AQ9BW72 106 aa10.58□□□□□ -0.72
COL20A1-207ENST00000494913 CBY1Q9Y3M2 126 aa10.58□□□□□ -0.72
COL20A1-207ENST00000494913 TRBV10-3A0A0K0K1G6 114 aa10.57□□□□□ -0.72
COL20A1-207ENST00000494913 TSTD3H0UI37 97 aa10.57□□□□□ -0.72
COL20A1-207ENST00000494913 LITAFQ99732 161 aa10.57□□□□□ -0.72
COL20A1-207ENST00000494913 LPAP08519 4548 aa10.57□□□□□ -0.72
COL20A1-207ENST00000494913 KCNQ1DNQ9H478 68 aa10.56□□□□□ -0.72
COL20A1-207ENST00000494913 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
COL20A1-207ENST00000494913 ETDCA0A1B0GVM5 59 aa10.55□□□□□ -0.72
COL20A1-207ENST00000494913 SOSTDC1Q6X4U4 206 aa10.55□□□□□ -0.72
COL20A1-207ENST00000494913 Q6ZVH6 145 aa10.55□□□□□ -0.72
COL20A1-207ENST00000494913 PCP2Q8IVA1 136 aa10.55□□□□□ -0.72
COL20A1-207ENST00000494913 RNF213Q63HN8 5207 aa10.55□□□□□ -0.72
COL20A1-207ENST00000494913 PRR4Q16378 134 aa10.55□□□□□ -0.72
COL20A1-207ENST00000494913 SPANXDQ9BXN6 97 aa10.55□□□□□ -0.72
COL20A1-207ENST00000494913 LINC00337Q8N6G1 96 aa10.54□□□□□ -0.72
COL20A1-207ENST00000494913 IFITM1P13164 125 aa10.53□□□□□ -0.72
COL20A1-207ENST00000494913 SPRR1AP35321 89 aa10.53□□□□□ -0.72
COL20A1-207ENST00000494913 OR13C6PQ8NH95 151 aa10.51□□□□□ -0.73
COL20A1-207ENST00000494913 KRTAP4-16G5E9R7 235 aaPredicted RBP10.5□□□□□ -0.73
COL20A1-207ENST00000494913 EIF4EBP3O60516 100 aaPredicted RBP10.5□□□□□ -0.73
COL20A1-207ENST00000494913 IGLV6-57P01721 117 aa10.5□□□□□ -0.73
COL20A1-207ENST00000494913 TRAV23DV6A0A075B6W5 121 aa10.49□□□□□ -0.73
COL20A1-207ENST00000494913 HINT1P49773 126 aaPredicted RBP10.49□□□□□ -0.73
COL20A1-207ENST00000494913 LINC00304Q8N9R0 145 aa10.49□□□□□ -0.73
COL20A1-207ENST00000494913 SPRR4Q96PI1 79 aa10.49□□□□□ -0.73
COL20A1-207ENST00000494913 VAMP8Q9BV40 100 aa10.49□□□□□ -0.73
COL20A1-207ENST00000494913 SMCR5Q8TEV8 140 aa10.49□□□□□ -0.73
COL20A1-207ENST00000494913 PPDPFQ9H3Y8 114 aa10.49□□□□□ -0.73
COL20A1-207ENST00000494913 C3orf22Q8N5N4 141 aa10.48□□□□□ -0.73
COL20A1-207ENST00000494913 PAM16Q9Y3D7 125 aa10.48□□□□□ -0.73
COL20A1-207ENST00000494913 ZNF706Q9Y5V0 76 aaPredicted RBP10.48□□□□□ -0.73
COL20A1-207ENST00000494913 SPATA45Q537H7 98 aa10.47□□□□□ -0.73
COL20A1-207ENST00000494913 COX8AP10176 69 aa10.46□□□□□ -0.74
COL20A1-207ENST00000494913 B5MCH6 92 aa10.45□□□□□ -0.74
COL20A1-207ENST00000494913 ZNF73O43830 326 aaPredicted RBP10.45□□□□□ -0.74
COL20A1-207ENST00000494913 MUSTN1Q8IVN3 82 aa10.45□□□□□ -0.74
COL20A1-207ENST00000494913 DLEU1O43261 78 aa10.44□□□□□ -0.74
COL20A1-207ENST00000494913 C14orf144Q96I85 54 aa10.44□□□□□ -0.74
COL20A1-207ENST00000494913 Q6ZRX8 168 aa10.42□□□□□ -0.74
COL20A1-207ENST00000494913 A6NDN8 102 aa10.42□□□□□ -0.74
COL20A1-207ENST00000494913 ERC2-IT1O76042 136 aa10.41□□□□□ -0.74
COL20A1-207ENST00000494913 TRAV13-2A0A0B4J235 113 aa10.4□□□□□ -0.74
COL20A1-207ENST00000494913 GAGE2AQ6NT46 116 aa10.4□□□□□ -0.74
COL20A1-207ENST00000494913 RETNLBQ9BQ08 111 aa10.4□□□□□ -0.74
COL20A1-207ENST00000494913 Q9BRP9 147 aa10.4□□□□□ -0.74
COL20A1-207ENST00000494913 HIST1H4GQ99525 98 aa10.39□□□□□ -0.75
COL20A1-207ENST00000494913 PRO1933Q9H354 126 aa10.39□□□□□ -0.75
COL20A1-207ENST00000494913 LINC00483Q53H64 154 aa10.37□□□□□ -0.75
COL20A1-207ENST00000494913 SLC25A34Q6PIV7 304 aa10.37□□□□□ -0.75
COL20A1-207ENST00000494913 SPAG11AQ6PDA7 123 aa10.36□□□□□ -0.75
COL20A1-207ENST00000494913 C6orf99Q4VX62 202 aa10.35□□□□□ -0.75
COL20A1-207ENST00000494913 C4orf48Q5BLP8 95 aa10.35□□□□□ -0.75
COL20A1-207ENST00000494913 Q8NBF4 154 aa10.35□□□□□ -0.75
COL20A1-207ENST00000494913 HIGD1BQ9P298 99 aa10.35□□□□□ -0.75
COL20A1-207ENST00000494913 COX7BP24311 80 aa10.34□□□□□ -0.75
COL20A1-207ENST00000494913 DHRS4-AS1Q9P1J3 65 aa10.34□□□□□ -0.75
COL20A1-207ENST00000494913 A4D1N5 150 aa10.33□□□□□ -0.76
COL20A1-207ENST00000494913 C2orf91Q6ZV80 131 aa10.33□□□□□ -0.76
COL20A1-207ENST00000494913 TRBV7-6A0A0J9YX20 115 aa10.32□□□□□ -0.76
COL20A1-207ENST00000494913 IGLV9-49A0A0B4J1Y8 123 aa10.31□□□□□ -0.76
COL20A1-207ENST00000494913 M0R143 59 aa10.3□□□□□ -0.76
COL20A1-207ENST00000494913 ELOF1P60002 83 aaKnown RBP10.3□□□□□ -0.76
COL20A1-207ENST00000494913 IGLV7-46A0A075B6I9 117 aa10.3□□□□□ -0.76
COL20A1-207ENST00000494913 A0A1B0GWB2 263 aa10.3□□□□□ -0.76
COL20A1-207ENST00000494913 MOBPQ13875 183 aa10.3□□□□□ -0.76
COL20A1-207ENST00000494913 UQCR10Q9UDW1 63 aa10.3□□□□□ -0.76
COL20A1-207ENST00000494913 VAMP3Q15836 100 aa10.29□□□□□ -0.76
COL20A1-207ENST00000494913 ST20-AS1Q8NBB2 130 aa10.29□□□□□ -0.76
COL20A1-207ENST00000494913 SMIM11BQ8TCY0 68 aa10.27□□□□□ -0.77
COL20A1-207ENST00000494913 A0A1B0GV90 55 aa10.26□□□□□ -0.77
COL20A1-207ENST00000494913 SPINK1P00995 79 aa10.26□□□□□ -0.77
COL20A1-207ENST00000494913 SSBP3-AS1Q7Z2R9 100 aa10.26□□□□□ -0.77
COL20A1-207ENST00000494913 NHP2Q9NX24 153 aaKnown RBP10.26□□□□□ -0.77
COL20A1-207ENST00000494913 TAL2Q16559 108 aa10.25□□□□□ -0.77
COL20A1-207ENST00000494913 RAB37Q96AX2 223 aa10.24□□□□□ -0.77
COL20A1-207ENST00000494913 TMEM238LA0A1B0GVL6 79 aa10.23□□□□□ -0.77
COL20A1-207ENST00000494913 A6NJY4 79 aa10.23□□□□□ -0.77
COL20A1-207ENST00000494913 SLC25A20O43772 301 aa10.23□□□□□ -0.77
COL20A1-207ENST00000494913 TPRXLQ17RH7 258 aa10.23□□□□□ -0.77
COL20A1-207ENST00000494913 SNHG12Q9BXW3 62 aa10.23□□□□□ -0.77
COL20A1-207ENST00000494913 MUC2Q02817 5179 aa10.23□□□□□ -0.77
COL20A1-207ENST00000494913 C9orf153Q5TBE3 101 aa10.23□□□□□ -0.77
COL20A1-207ENST00000494913 CDIP1Q9H305 208 aa10.23□□□□□ -0.77
COL20A1-207ENST00000494913 CEND1Q8N111 149 aa10.21□□□□□ -0.78
COL20A1-207ENST00000494913 FP248Q71RG6 208 aaPredicted RBP10.2□□□□□ -0.78
COL20A1-207ENST00000494913 HSD52Q0P140 79 aa10.19□□□□□ -0.78
COL20A1-207ENST00000494913 BVES-AS1Q5T3Y7 98 aa10.19□□□□□ -0.78
COL20A1-207ENST00000494913 LAMTOR3Q9UHA4 124 aa10.19□□□□□ -0.78
COL20A1-207ENST00000494913 DEFB105AQ8NG35 78 aa10.18□□□□□ -0.78
COL20A1-207ENST00000494913 A0A0B4J2C4 111 aa10.17□□□□□ -0.78
COL20A1-207ENST00000494913 H7C2G1 150 aa10.17□□□□□ -0.78
COL20A1-207ENST00000494913 CFC1BP0CG36 223 aa10.17□□□□□ -0.78
COL20A1-207ENST00000494913 CFC1P0CG37 223 aa10.17□□□□□ -0.78
COL20A1-207ENST00000494913 SPRR1BP22528 89 aa10.17□□□□□ -0.78
COL20A1-207ENST00000494913 TEX49A0A1B0GTD5 131 aa10.17□□□□□ -0.78
COL20A1-207ENST00000494913 RPS29P62273 56 aaKnown RBP10.17□□□□□ -0.78
COL20A1-207ENST00000494913 SNCGO76070 127 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms