RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 LITAFQ99732 161 aa10.34□□□□□ -0.75
HDAC4-211ENST00000494800 S100A6P06703 90 aa10.33□□□□□ -0.76
HDAC4-211ENST00000494800 HINT1P49773 126 aaPredicted RBP10.33□□□□□ -0.76
HDAC4-211ENST00000494800 COPS9Q8WXC6 57 aa10.33□□□□□ -0.76
HDAC4-211ENST00000494800 SNRPEP62304 92 aaKnown RBP10.32□□□□□ -0.76
HDAC4-211ENST00000494800 Q6ZRX8 168 aa10.32□□□□□ -0.76
HDAC4-211ENST00000494800 ATOH7Q8N100 152 aa10.32□□□□□ -0.76
HDAC4-211ENST00000494800 TTTY13Q9BZ97 58 aa10.32□□□□□ -0.76
HDAC4-211ENST00000494800 LRP2P98164 4655 aa10.32□□□□□ -0.76
HDAC4-211ENST00000494800 ZNF73O43830 326 aaPredicted RBP10.31□□□□□ -0.76
HDAC4-211ENST00000494800 EIF4EBP3O60516 100 aaPredicted RBP10.31□□□□□ -0.76
HDAC4-211ENST00000494800 OR13C6PQ8NH95 151 aa10.31□□□□□ -0.76
HDAC4-211ENST00000494800 CTAG1AP78358 180 aa10.3□□□□□ -0.76
HDAC4-211ENST00000494800 LINC00518Q8N0U6 118 aa10.3□□□□□ -0.76
HDAC4-211ENST00000494800 ANKRD39Q53RE8 183 aa10.29□□□□□ -0.76
HDAC4-211ENST00000494800 HIST3H2BBQ8N257 126 aa10.29□□□□□ -0.76
HDAC4-211ENST00000494800 C3orf22Q8N5N4 141 aa10.28□□□□□ -0.76
HDAC4-211ENST00000494800 HIST1H2BLQ99880 126 aa10.28□□□□□ -0.76
HDAC4-211ENST00000494800 SPANXDQ9BXN6 97 aa10.28□□□□□ -0.76
HDAC4-211ENST00000494800 PPDPFQ9H3Y8 114 aa10.28□□□□□ -0.76
HDAC4-211ENST00000494800 C4orf48Q5BLP8 95 aa10.27□□□□□ -0.77
HDAC4-211ENST00000494800 GAGE2AQ6NT46 116 aa10.27□□□□□ -0.77
HDAC4-211ENST00000494800 SPAG11AQ6PDA7 123 aa10.27□□□□□ -0.77
HDAC4-211ENST00000494800 Q6ZVH6 145 aa10.27□□□□□ -0.77
HDAC4-211ENST00000494800 HSBP1L1C9JCN9 74 aa10.26□□□□□ -0.77
HDAC4-211ENST00000494800 IFITM1P13164 125 aa10.26□□□□□ -0.77
HDAC4-211ENST00000494800 LINC00483Q53H64 154 aa10.26□□□□□ -0.77
HDAC4-211ENST00000494800 Q9BRP9 147 aa10.26□□□□□ -0.77
HDAC4-211ENST00000494800 ERC2-IT1O76042 136 aa10.23□□□□□ -0.77
HDAC4-211ENST00000494800 PCP2Q8IVA1 136 aa10.23□□□□□ -0.77
HDAC4-211ENST00000494800 C5orf52A6NGY3 159 aa10.21□□□□□ -0.77
HDAC4-211ENST00000494800 Q8NBF4 154 aa10.2□□□□□ -0.78
HDAC4-211ENST00000494800 DHRS4-AS1Q9P1J3 65 aa10.2□□□□□ -0.78
HDAC4-211ENST00000494800 IGLV9-49A0A0B4J1Y8 123 aa10.19□□□□□ -0.78
HDAC4-211ENST00000494800 A6NDN8 102 aa10.18□□□□□ -0.78
HDAC4-211ENST00000494800 MOBPQ13875 183 aa10.18□□□□□ -0.78
HDAC4-211ENST00000494800 MUSTN1Q8IVN3 82 aa10.18□□□□□ -0.78
HDAC4-211ENST00000494800 RETNLBQ9BQ08 111 aa10.18□□□□□ -0.78
HDAC4-211ENST00000494800 LPAP08519 4548 aa10.17□□□□□ -0.78
HDAC4-211ENST00000494800 COX7BP24311 80 aa10.17□□□□□ -0.78
HDAC4-211ENST00000494800 C6orf99Q4VX62 202 aa10.17□□□□□ -0.78
HDAC4-211ENST00000494800 SSBP3-AS1Q7Z2R9 100 aa10.17□□□□□ -0.78
HDAC4-211ENST00000494800 SCGB1D1O95968 90 aa10.16□□□□□ -0.78
HDAC4-211ENST00000494800 SPINK1P00995 79 aa10.16□□□□□ -0.78
HDAC4-211ENST00000494800 ELOF1P60002 83 aaKnown RBP10.15□□□□□ -0.78
HDAC4-211ENST00000494800 SLC25A34Q6PIV7 304 aa10.15□□□□□ -0.78
HDAC4-211ENST00000494800 TRAV13-2A0A0B4J235 113 aa10.14□□□□□ -0.79
HDAC4-211ENST00000494800 TRBV7-6A0A0J9YX20 115 aa10.14□□□□□ -0.79
HDAC4-211ENST00000494800 C9orf153Q5TBE3 101 aa10.14□□□□□ -0.79
HDAC4-211ENST00000494800 ST20-AS1Q8NBB2 130 aa10.13□□□□□ -0.79
HDAC4-211ENST00000494800 IGLV7-46A0A075B6I9 117 aa10.12□□□□□ -0.79
HDAC4-211ENST00000494800 RNF213Q63HN8 5207 aa10.11□□□□□ -0.79
HDAC4-211ENST00000494800 A0A1B0GWB2 263 aa10.11□□□□□ -0.79
HDAC4-211ENST00000494800 A4D1N5 150 aa10.09□□□□□ -0.79
HDAC4-211ENST00000494800 RPS29P62273 56 aaKnown RBP10.09□□□□□ -0.79
HDAC4-211ENST00000494800 FP248Q71RG6 208 aaPredicted RBP10.09□□□□□ -0.79
HDAC4-211ENST00000494800 LAMTOR3Q9UHA4 124 aa10.09□□□□□ -0.79
HDAC4-211ENST00000494800 SPRR1BP22528 89 aa10.08□□□□□ -0.8
HDAC4-211ENST00000494800 TAL2Q16559 108 aa10.08□□□□□ -0.8
HDAC4-211ENST00000494800 TPRXLQ17RH7 258 aa10.08□□□□□ -0.8
HDAC4-211ENST00000494800 CDIP1Q9H305 208 aa10.08□□□□□ -0.8
HDAC4-211ENST00000494800 NHP2Q9NX24 153 aaKnown RBP10.07□□□□□ -0.8
HDAC4-211ENST00000494800 VAMP3Q15836 100 aa10.05□□□□□ -0.8
HDAC4-211ENST00000494800 DEFB105AQ8NG35 78 aa10.05□□□□□ -0.8
HDAC4-211ENST00000494800 TEX49A0A1B0GTD5 131 aa10.04□□□□□ -0.8
HDAC4-211ENST00000494800 COX8AP10176 69 aa10.04□□□□□ -0.8
HDAC4-211ENST00000494800 SMIM11BQ8TCY0 68 aa10.04□□□□□ -0.8
HDAC4-211ENST00000494800 HIST1H4GQ99525 98 aa10.04□□□□□ -0.8
HDAC4-211ENST00000494800 SLC25A20O43772 301 aa10.03□□□□□ -0.8
HDAC4-211ENST00000494800 DLEU1O43261 78 aa10.01□□□□□ -0.81
HDAC4-211ENST00000494800 Q8N377 158 aa10□□□□□ -0.81
HDAC4-211ENST00000494800 Q1RN00 199 aa9.99□□□□□ -0.81
HDAC4-211ENST00000494800 LIMD2Q9BT23 127 aa9.98□□□□□ -0.81
HDAC4-211ENST00000494800 VAMP8Q9BV40 100 aa9.98□□□□□ -0.81
HDAC4-211ENST00000494800 PAM16Q9Y3D7 125 aa9.98□□□□□ -0.81
HDAC4-211ENST00000494800 IGLV5-48A0A075B6I7 105 aa9.97□□□□□ -0.81
HDAC4-211ENST00000494800 SPATA45Q537H7 98 aa9.97□□□□□ -0.81
HDAC4-211ENST00000494800 PRO1933Q9H354 126 aa9.97□□□□□ -0.81
HDAC4-211ENST00000494800 C14orf144Q96I85 54 aa9.96□□□□□ -0.82
HDAC4-211ENST00000494800 C12orf57Q99622 126 aa9.95□□□□□ -0.82
HDAC4-211ENST00000494800 HRCT1Q6UXD1 115 aa9.94□□□□□ -0.82
HDAC4-211ENST00000494800 A0A0U1RQV1 116 aa9.93□□□□□ -0.82
HDAC4-211ENST00000494800 CD164Q04900 197 aa9.93□□□□□ -0.82
HDAC4-211ENST00000494800 BVES-AS1Q5T3Y7 98 aa9.93□□□□□ -0.82
HDAC4-211ENST00000494800 LINC00575Q6W349 94 aa9.93□□□□□ -0.82
HDAC4-211ENST00000494800 HIGD1BQ9P298 99 aa9.93□□□□□ -0.82
HDAC4-211ENST00000494800 hADV29S1A0JD25 119 aa9.92□□□□□ -0.82
HDAC4-211ENST00000494800 LINC01547P58512 204 aaPredicted RBP9.92□□□□□ -0.82
HDAC4-211ENST00000494800 F8WEM9 126 aa9.91□□□□□ -0.82
HDAC4-211ENST00000494800 H7C2G1 150 aa9.91□□□□□ -0.82
HDAC4-211ENST00000494800 KRTAP13-3Q3SY46 172 aa9.91□□□□□ -0.82
HDAC4-211ENST00000494800 SMIM29Q86T20 159 aa9.91□□□□□ -0.82
HDAC4-211ENST00000494800 RAB37Q96AX2 223 aa9.91□□□□□ -0.82
HDAC4-211ENST00000494800 SNCGO76070 127 aa9.88□□□□□ -0.83
HDAC4-211ENST00000494800 Q6ZQY7 126 aa9.88□□□□□ -0.83
HDAC4-211ENST00000494800 TMEM238LA0A1B0GVL6 79 aa9.86□□□□□ -0.83
HDAC4-211ENST00000494800 A6NJY4 79 aa9.86□□□□□ -0.83
HDAC4-211ENST00000494800 CFC1BP0CG36 223 aa9.86□□□□□ -0.83
HDAC4-211ENST00000494800 CFC1P0CG37 223 aa9.86□□□□□ -0.83
HDAC4-211ENST00000494800 A0A0B4J2C4 111 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms