RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 WT1-ASQ06250 92 aa2.53□□□□□ -2
CCDC66-222ENST00000494672 SSBP3-AS1Q7Z2R9 100 aa2.53□□□□□ -2
CCDC66-222ENST00000494672 PRO3102Q9H379 93 aa2.53□□□□□ -2
CCDC66-222ENST00000494672 IGLV6-57P01721 117 aa2.52□□□□□ -2.01
CCDC66-222ENST00000494672 RPL39P5Q59GN2 51 aa2.52□□□□□ -2.01
CCDC66-222ENST00000494672 SPTY2D1-AS1A0A0U1RR47 76 aa2.51□□□□□ -2.01
CCDC66-222ENST00000494672 I3L2K1 104 aa2.51□□□□□ -2.01
CCDC66-222ENST00000494672 K7EQZ3 153 aa2.51□□□□□ -2.01
CCDC66-222ENST00000494672 LY6G6CO95867 125 aa2.51□□□□□ -2.01
CCDC66-222ENST00000494672 TP53AIP1Q9HCN2 124 aa2.51□□□□□ -2.01
CCDC66-222ENST00000494672 R4GN34 69 aa2.51□□□□□ -2.01
CCDC66-222ENST00000494672 BPTFQ12830 3046 aa2.51□□□□□ -2.01
CCDC66-222ENST00000494672 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
CCDC66-222ENST00000494672 TECTAO75443 2155 aa2.5□□□□□ -2.01
CCDC66-222ENST00000494672 DOPEY2Q9Y3R5 2298 aa2.49□□□□□ -2.01
CCDC66-222ENST00000494672 IGLV5-48A0A075B6I7 105 aa2.49□□□□□ -2.01
CCDC66-222ENST00000494672 DEFB108AA8MXU0 73 aa2.49□□□□□ -2.01
CCDC66-222ENST00000494672 DEFB134Q4QY38 66 aa2.49□□□□□ -2.01
CCDC66-222ENST00000494672 CCL26Q9Y258 94 aa2.49□□□□□ -2.01
CCDC66-222ENST00000494672 KNL1Q8NG31 2342 aa2.48□□□□□ -2.01
CCDC66-222ENST00000494672 LYNX1G3V0Z9 82 aa2.48□□□□□ -2.01
CCDC66-222ENST00000494672 COX6A2Q02221 97 aa2.48□□□□□ -2.01
CCDC66-222ENST00000494672 LY6EQ16553 131 aa2.48□□□□□ -2.01
CCDC66-222ENST00000494672 CNTRLQ7Z7A1 2325 aa2.48□□□□□ -2.01
CCDC66-222ENST00000494672 ASXL3Q9C0F0 2248 aa2.48□□□□□ -2.01
CCDC66-222ENST00000494672 ZFHX2Q9C0A1 2572 aaPredicted RBP2.47□□□□□ -2.01
CCDC66-222ENST00000494672 STATHP02808 62 aa2.47□□□□□ -2.01
CCDC66-222ENST00000494672 C10orf55Q5SWW7 151 aa2.47□□□□□ -2.01
CCDC66-222ENST00000494672 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
CCDC66-222ENST00000494672 WFDC13Q8IUB5 93 aa2.47□□□□□ -2.01
CCDC66-222ENST00000494672 BRWD1Q9NSI6 2320 aa2.47□□□□□ -2.01
CCDC66-222ENST00000494672 ASCC3Q8N3C0 2202 aaKnown RBP2.46□□□□□ -2.01
CCDC66-222ENST00000494672 TPRXLQ17RH7 258 aa2.46□□□□□ -2.02
CCDC66-222ENST00000494672 PCOTHQ58A44 107 aa2.46□□□□□ -2.02
CCDC66-222ENST00000494672 MINOS1Q5TGZ0 78 aa2.46□□□□□ -2.02
CCDC66-222ENST00000494672 SPACA4Q8TDM5 124 aa2.46□□□□□ -2.02
CCDC66-222ENST00000494672 IGKV2-24A0A0C4DH68 120 aa2.45□□□□□ -2.02
CCDC66-222ENST00000494672 WFDC10BQ8IUB3 73 aa2.45□□□□□ -2.02
CCDC66-222ENST00000494672 C6orf48Q9UBA6 75 aa2.45□□□□□ -2.02
CCDC66-222ENST00000494672 AHCTF1Q8WYP5 2266 aa2.45□□□□□ -2.02
CCDC66-222ENST00000494672 G3V318 75 aa2.44□□□□□ -2.02
CCDC66-222ENST00000494672 K7EIM0 57 aa2.44□□□□□ -2.02
CCDC66-222ENST00000494672 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.44□□□□□ -2.02
CCDC66-222ENST00000494672 UTRNP46939 3433 aa2.43□□□□□ -2.02
CCDC66-222ENST00000494672 PRR9Q5T870 116 aa2.43□□□□□ -2.02
CCDC66-222ENST00000494672 Q6ZRX8 168 aa2.43□□□□□ -2.02
CCDC66-222ENST00000494672 DEFB104AQ8WTQ1 72 aa2.43□□□□□ -2.02
CCDC66-222ENST00000494672 PLCE1Q9P212 2302 aa2.43□□□□□ -2.02
CCDC66-222ENST00000494672 ANKRD17O75179 2603 aaKnown RBP2.43□□□□□ -2.02
CCDC66-222ENST00000494672 ABCA1O95477 2261 aa2.42□□□□□ -2.02
CCDC66-222ENST00000494672 INE1O15225 51 aa2.42□□□□□ -2.02
CCDC66-222ENST00000494672 TOMM7Q9P0U1 55 aa2.42□□□□□ -2.02
CCDC66-222ENST00000494672 CNOT1A5YKK6 2376 aaKnown RBP2.41□□□□□ -2.02
CCDC66-222ENST00000494672 PLAC4Q8WY50 150 aa2.41□□□□□ -2.02
CCDC66-222ENST00000494672 BAHCC1Q9P281 2608 aa2.41□□□□□ -2.02
CCDC66-222ENST00000494672 CACNA1GO43497 2377 aa2.41□□□□□ -2.02
CCDC66-222ENST00000494672 H0YGG7 62 aa2.4□□□□□ -2.03
CCDC66-222ENST00000494672 COX14Q96I36 57 aa2.4□□□□□ -2.03
CCDC66-222ENST00000494672 GVQW2A0A096LPI5 108 aaPredicted RBP2.39□□□□□ -2.03
CCDC66-222ENST00000494672 NAV3Q8IVL0 2385 aa2.39□□□□□ -2.03
CCDC66-222ENST00000494672 ICE1Q9Y2F5 2266 aa2.38□□□□□ -2.03
CCDC66-222ENST00000494672 CRIPTQ9P021 101 aa2.38□□□□□ -2.03
CCDC66-222ENST00000494672 TNRC18O15417 2968 aaPredicted RBP2.38□□□□□ -2.03
CCDC66-222ENST00000494672 DEFB131AP59861 70 aa2.37□□□□□ -2.03
CCDC66-222ENST00000494672 PCNTO95613 3336 aa2.37□□□□□ -2.03
CCDC66-222ENST00000494672 H0YAA0 97 aa2.36□□□□□ -2.03
CCDC66-222ENST00000494672 COX6B2Q6YFQ2 88 aa2.36□□□□□ -2.03
CCDC66-222ENST00000494672 MRPL34Q9BQ48 92 aaKnown RBP2.36□□□□□ -2.03
CCDC66-222ENST00000494672 KAAG1Q9UBP8 84 aa2.36□□□□□ -2.03
CCDC66-222ENST00000494672 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.36□□□□□ -2.03
CCDC66-222ENST00000494672 MMP24-AS1A0A0U1RRL7 71 aa2.35□□□□□ -2.03
CCDC66-222ENST00000494672 A8MTW9 85 aa2.35□□□□□ -2.03
CCDC66-222ENST00000494672 EP400Q96L91 3159 aa2.34□□□□□ -2.03
CCDC66-222ENST00000494672 CACNA1EQ15878 2313 aa2.34□□□□□ -2.04
CCDC66-222ENST00000494672 KLK9Q2XQG4 91 aa2.33□□□□□ -2.04
CCDC66-222ENST00000494672 C10orf99Q6UWK7 81 aa2.33□□□□□ -2.04
CCDC66-222ENST00000494672 COL6A6A6NMZ7 2263 aa2.33□□□□□ -2.04
CCDC66-222ENST00000494672 IGFL1Q6UW32 110 aa2.32□□□□□ -2.04
CCDC66-222ENST00000494672 Q6ZRN7 208 aaPredicted RBP2.32□□□□□ -2.04
CCDC66-222ENST00000494672 APELAP0DMC3 54 aa2.31□□□□□ -2.04
CCDC66-222ENST00000494672 Q6ZSA8 131 aa2.31□□□□□ -2.04
CCDC66-222ENST00000494672 A0A0C4DFX4 3053 aa2.31□□□□□ -2.04
CCDC66-222ENST00000494672 USMG5Q96IX5 58 aa2.3□□□□□ -2.04
CCDC66-222ENST00000494672 H1FX-AS1Q4G0G2 97 aa2.29□□□□□ -2.04
CCDC66-222ENST00000494672 UBE2DNLQ8IWF7 75 aa2.29□□□□□ -2.04
CCDC66-222ENST00000494672 FN1P02751 2386 aaKnown RBP2.29□□□□□ -2.04
CCDC66-222ENST00000494672 CACNA1BQ00975 2339 aa2.28□□□□□ -2.04
CCDC66-222ENST00000494672 CLPSL2Q6UWE3 100 aa2.28□□□□□ -2.04
CCDC66-222ENST00000494672 DEFB105AQ8NG35 78 aa2.27□□□□□ -2.05
CCDC66-222ENST00000494672 GPR179Q6PRD1 2367 aa2.27□□□□□ -2.05
CCDC66-222ENST00000494672 ZFHX4Q86UP3 3567 aa2.26□□□□□ -2.05
CCDC66-222ENST00000494672 COL6A3P12111 3177 aa2.26□□□□□ -2.05
CCDC66-222ENST00000494672 WNK2Q9Y3S1 2297 aa2.26□□□□□ -2.05
CCDC66-222ENST00000494672 ALMS1Q8TCU4 4167 aa2.25□□□□□ -2.05
CCDC66-222ENST00000494672 DEFB130BP0DP73 79 aa2.25□□□□□ -2.05
CCDC66-222ENST00000494672 DEFB130AP0DP74 79 aa2.25□□□□□ -2.05
CCDC66-222ENST00000494672 RPL37P61927 97 aaKnown RBP2.25□□□□□ -2.05
CCDC66-222ENST00000494672 SPINK13Q1W4C9 94 aa2.25□□□□□ -2.05
CCDC66-222ENST00000494672 C10orf95Q9H7T3 257 aa2.25□□□□□ -2.05
CCDC66-222ENST00000494672 SZT2Q5T011 3432 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 232.7 ms