RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 SS18Q15532 418 aa7.23□□□□□ -1.25
PDLIM1-205ENST00000493949 C5orf47Q569G3 176 aa7.23□□□□□ -1.25
PDLIM1-205ENST00000493949 Q9HAA7 133 aa7.22□□□□□ -1.25
PDLIM1-205ENST00000493949 IGHV4-28A0A0C4DH34 117 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 LINC00959A0A1B0GUT2 108 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 PLAC8L1A1L4L8 177 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 USP17L23D6RBM5 183 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 LINC00612Q8N6U2 182 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 UPK3BQ9BT76 320 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 KRTAP4-9Q9BYQ8 210 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 NOP10Q9NPE3 64 aaKnown RBP7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 C14orf132Q9NPU4 83 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 LINC00846Q9NV44 126 aa7.21□□□□□ -1.26
PDLIM1-205ENST00000493949 TRAV10A0A0B4J240 114 aa7.2□□□□□ -1.26
PDLIM1-205ENST00000493949 EPM2AB3EWF7 344 aa7.2□□□□□ -1.26
PDLIM1-205ENST00000493949 C6orf226Q5I0X4 101 aa7.2□□□□□ -1.26
PDLIM1-205ENST00000493949 UBL5Q9BZL1 73 aa7.2□□□□□ -1.26
PDLIM1-205ENST00000493949 TOMM7Q9P0U1 55 aa7.2□□□□□ -1.26
PDLIM1-205ENST00000493949 LOC110117498A0A087WWA1 95 aa7.19□□□□□ -1.26
PDLIM1-205ENST00000493949 SMIM9A6NGZ8 99 aa7.19□□□□□ -1.26
PDLIM1-205ENST00000493949 PRM2P04554 102 aa7.19□□□□□ -1.26
PDLIM1-205ENST00000493949 FHL2Q14192 279 aa7.19□□□□□ -1.26
PDLIM1-205ENST00000493949 C1orf134Q5TEV5 83 aa7.19□□□□□ -1.26
PDLIM1-205ENST00000493949 Q8N814 137 aa7.19□□□□□ -1.26
PDLIM1-205ENST00000493949 CSNK1G2-AS1Q8NCQ2 148 aa7.18□□□□□ -1.26
PDLIM1-205ENST00000493949 IGLV4-60A0A075B6I1 120 aa7.17□□□□□ -1.26
PDLIM1-205ENST00000493949 Q6ZTC4 211 aa7.17□□□□□ -1.26
PDLIM1-205ENST00000493949 Q8NAQ8 132 aa7.17□□□□□ -1.26
PDLIM1-205ENST00000493949 FAT1Q14517 4588 aa7.17□□□□□ -1.26
PDLIM1-205ENST00000493949 LOC100131303A0A0U1RQF7 123 aa7.16□□□□□ -1.26
PDLIM1-205ENST00000493949 ZNF561-AS1K7EIQ3 104 aa7.16□□□□□ -1.26
PDLIM1-205ENST00000493949 GIG44P09565 113 aaPredicted RBP7.16□□□□□ -1.26
PDLIM1-205ENST00000493949 CD164L2Q6UWJ8 174 aa7.16□□□□□ -1.26
PDLIM1-205ENST00000493949 LOC107984640A0A0U1RRK4 108 aa7.15□□□□□ -1.26
PDLIM1-205ENST00000493949 IGKV3D-7A0A0C4DH55 119 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 NCR3O14931 201 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 PFN2P35080 140 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 ATP5EP56381 51 aaPredicted RBP7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 CXCL6P80162 114 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 FAM19A5Q7Z5A7 132 aaPredicted RBP7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 C6orf223Q8N319 242 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 DPH3Q96FX2 82 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 PRO0255Q9UI72 69 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 HMCN2Q8NDA2 5059 aa7.14□□□□□ -1.27
PDLIM1-205ENST00000493949 TRAV7A0A075B6U4 112 aa7.13□□□□□ -1.27
PDLIM1-205ENST00000493949 TRBV7-6A0A0J9YX20 115 aa7.13□□□□□ -1.27
PDLIM1-205ENST00000493949 LYRM9A8MSI8 78 aa7.13□□□□□ -1.27
PDLIM1-205ENST00000493949 NDUFC1O43677 76 aa7.13□□□□□ -1.27
PDLIM1-205ENST00000493949 CELA1Q9UNI1 258 aa7.13□□□□□ -1.27
PDLIM1-205ENST00000493949 DEFB131BA0A096LNP1 70 aa7.12□□□□□ -1.27
PDLIM1-205ENST00000493949 LINC00575Q6W349 94 aa7.12□□□□□ -1.27
PDLIM1-205ENST00000493949 GVQW2A0A096LPI5 108 aaPredicted RBP7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 MIFP14174 115 aa7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 RBM3P98179 157 aaKnown RBP7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 KIAA0087Q14695 138 aa7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 C9orf129Q5T035 196 aaKnown RBP7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 UBE2DNLQ8IWF7 75 aa7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 KRTAP4-2Q9BYR5 136 aa7.11□□□□□ -1.27
PDLIM1-205ENST00000493949 Q6ZQT0 140 aa7.1□□□□□ -1.27
PDLIM1-205ENST00000493949 GYPEP15421 78 aa7.09□□□□□ -1.27
PDLIM1-205ENST00000493949 KLKP1Q107X0 134 aa7.09□□□□□ -1.27
PDLIM1-205ENST00000493949 Q5VSD8 79 aa7.09□□□□□ -1.27
PDLIM1-205ENST00000493949 X6R8D5 127 aa7.09□□□□□ -1.27
PDLIM1-205ENST00000493949 IGKV3OR2-268A0A0C4DH90 116 aa7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 ERC2-IT1O76042 136 aa7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 IGLV6-57P01721 117 aa7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 XCL1P47992 114 aa7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 DSCR8Q96T75 97 aa7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 SERP1Q9Y6X1 66 aa7.08□□□□□ -1.28
PDLIM1-205ENST00000493949 FAM236DA0A1B0GTK5 79 aa7.07□□□□□ -1.28
PDLIM1-205ENST00000493949 FAM236CP0DP71 79 aa7.07□□□□□ -1.28
PDLIM1-205ENST00000493949 C6orf99Q4VX62 202 aa7.07□□□□□ -1.28
PDLIM1-205ENST00000493949 A0A087WVE0 104 aa7.06□□□□□ -1.28
PDLIM1-205ENST00000493949 A0A1B0GW54 56 aa7.06□□□□□ -1.28
PDLIM1-205ENST00000493949 F8WDY8 70 aa7.06□□□□□ -1.28
PDLIM1-205ENST00000493949 SLPIP03973 132 aa7.06□□□□□ -1.28
PDLIM1-205ENST00000493949 SERTAD4-AS1Q5TG53 156 aa7.06□□□□□ -1.28
PDLIM1-205ENST00000493949 CHCHD10Q8WYQ3 142 aaPredicted RBP7.06□□□□□ -1.28
PDLIM1-205ENST00000493949 KRTAP10-2P60368 255 aa7.05□□□□□ -1.28
PDLIM1-205ENST00000493949 ENHOQ6UWT2 76 aa7.05□□□□□ -1.28
PDLIM1-205ENST00000493949 NBDYA0A0U1RRE5 68 aa7.04□□□□□ -1.28
PDLIM1-205ENST00000493949 REG3AQ06141 175 aa7.04□□□□□ -1.28
PDLIM1-205ENST00000493949 DIRC1Q969H9 104 aa7.04□□□□□ -1.28
PDLIM1-205ENST00000493949 TRBV7-4A0A0J9YYF1 115 aa7.03□□□□□ -1.28
PDLIM1-205ENST00000493949 LINC01547P58512 204 aaPredicted RBP7.03□□□□□ -1.28
PDLIM1-205ENST00000493949 LAMTOR3Q9UHA4 124 aa7.03□□□□□ -1.28
PDLIM1-205ENST00000493949 TRAV23DV6A0A075B6W5 121 aa7.02□□□□□ -1.29
PDLIM1-205ENST00000493949 SPAG11BQ08648 103 aa7.02□□□□□ -1.29
PDLIM1-205ENST00000493949 LELP1Q5T871 98 aa7.02□□□□□ -1.29
PDLIM1-205ENST00000493949 Q6ZVQ6 151 aa7.02□□□□□ -1.29
PDLIM1-205ENST00000493949 PRR34Q9NV39 138 aa7.02□□□□□ -1.29
PDLIM1-205ENST00000493949 DEFB130BP0DP73 79 aa7.01□□□□□ -1.29
PDLIM1-205ENST00000493949 DEFB130AP0DP74 79 aa7.01□□□□□ -1.29
PDLIM1-205ENST00000493949 LINC00269Q8N2A0 174 aa7.01□□□□□ -1.29
PDLIM1-205ENST00000493949 CYSTM1Q9H1C7 97 aa7.01□□□□□ -1.29
PDLIM1-205ENST00000493949 KRTAP29-1A8MX34 341 aaPredicted RBP7□□□□□ -1.29
PDLIM1-205ENST00000493949 H7BZZ5 65 aa7□□□□□ -1.29
PDLIM1-205ENST00000493949 ANGP03950 147 aaKnown RBP7□□□□□ -1.29
PDLIM1-205ENST00000493949 FAM19A1Q7Z5A9 133 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms