RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 LYSTQ99698 3801 aa7.85□□□□□ -1.15
BRCA1-222ENST00000493919 NUPR2A6NF83 97 aa7.85□□□□□ -1.15
BRCA1-222ENST00000493919 F5H697 171 aa7.85□□□□□ -1.15
BRCA1-222ENST00000493919 MSRB1Q9NZV6 116 aa7.85□□□□□ -1.15
BRCA1-222ENST00000493919 HTN3P15516 51 aa7.84□□□□□ -1.15
BRCA1-222ENST00000493919 MOBPQ13875 183 aa7.84□□□□□ -1.15
BRCA1-222ENST00000493919 ZNF625Q96I27 306 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-222ENST00000493919 CDC42SE2Q9NRR3 84 aa7.84□□□□□ -1.15
BRCA1-222ENST00000493919 SACSQ9NZJ4 4579 aa7.84□□□□□ -1.15
BRCA1-222ENST00000493919 LOC101927531A0A1B0GV80 90 aa7.84□□□□□ -1.16
BRCA1-222ENST00000493919 TSHBP01222 138 aa7.84□□□□□ -1.16
BRCA1-222ENST00000493919 LINC00467Q9BRT7 94 aa7.84□□□□□ -1.16
BRCA1-222ENST00000493919 DEFB131BA0A096LNP1 70 aa7.82□□□□□ -1.16
BRCA1-222ENST00000493919 TRGV1A0A0A0MS02 117 aa7.82□□□□□ -1.16
BRCA1-222ENST00000493919 A6NED7 52 aa7.82□□□□□ -1.16
BRCA1-222ENST00000493919 FAM218AQ96MZ4 157 aa7.82□□□□□ -1.16
BRCA1-222ENST00000493919 C11orf21Q9P2W6 132 aa7.82□□□□□ -1.16
BRCA1-222ENST00000493919 LINC01547P58512 204 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-222ENST00000493919 Q6ZTI0 123 aa7.82□□□□□ -1.16
BRCA1-222ENST00000493919 Q8N3U1 123 aa7.82□□□□□ -1.16
BRCA1-222ENST00000493919 ORMDL1Q9P0S3 153 aa7.82□□□□□ -1.16
BRCA1-222ENST00000493919 IGHV3-30-3P0DP02 117 aa7.8□□□□□ -1.16
BRCA1-222ENST00000493919 CASC2Q6XLA1 102 aa7.8□□□□□ -1.16
BRCA1-222ENST00000493919 TRGV2A0A075B6R0 118 aa7.8□□□□□ -1.16
BRCA1-222ENST00000493919 BPY2O14599 106 aa7.8□□□□□ -1.16
BRCA1-222ENST00000493919 CHCHD10Q8WYQ3 142 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-222ENST00000493919 ALMS1Q8TCU4 4167 aa7.79□□□□□ -1.16
BRCA1-222ENST00000493919 IGHV3-16A0A0C4DH30 117 aa7.79□□□□□ -1.16
BRCA1-222ENST00000493919 ELOF1P60002 83 aaKnown RBP7.79□□□□□ -1.16
BRCA1-222ENST00000493919 DNAH1Q9P2D7 4330 aa7.78□□□□□ -1.16
BRCA1-222ENST00000493919 A0A1B0GW54 56 aa7.78□□□□□ -1.16
BRCA1-222ENST00000493919 RETNLBQ9BQ08 111 aa7.78□□□□□ -1.16
BRCA1-222ENST00000493919 RYR3Q15413 4870 aa7.78□□□□□ -1.16
BRCA1-222ENST00000493919 IGKV3D-20A0A0C4DH25 116 aa7.78□□□□□ -1.16
BRCA1-222ENST00000493919 IGHV3-53P01767 116 aa7.78□□□□□ -1.16
BRCA1-222ENST00000493919 MIR7-3HGQ8N6C7 128 aa7.78□□□□□ -1.16
BRCA1-222ENST00000493919 LRCOL1A6NCL2 159 aa7.77□□□□□ -1.17
BRCA1-222ENST00000493919 NCR3O14931 201 aa7.77□□□□□ -1.17
BRCA1-222ENST00000493919 C9orf129Q5T035 196 aaKnown RBP7.77□□□□□ -1.17
BRCA1-222ENST00000493919 LINC00612Q8N6U2 182 aa7.77□□□□□ -1.17
BRCA1-222ENST00000493919 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-222ENST00000493919 LINC00308Q8TCZ7 52 aa7.77□□□□□ -1.17
BRCA1-222ENST00000493919 PRR15LQ9BU68 103 aa7.77□□□□□ -1.17
BRCA1-222ENST00000493919 OCR1Q9BZK8 76 aa7.77□□□□□ -1.17
BRCA1-222ENST00000493919 LCE6AA0A183 80 aa7.76□□□□□ -1.17
BRCA1-222ENST00000493919 RYR2Q92736 4967 aa7.75□□□□□ -1.17
BRCA1-222ENST00000493919 RNASE3P12724 160 aaKnown RBP7.75□□□□□ -1.17
BRCA1-222ENST00000493919 VPS13DQ5THJ4 4388 aa7.74□□□□□ -1.17
BRCA1-222ENST00000493919 HYDINQ4G0P3 5121 aa7.74□□□□□ -1.17
BRCA1-222ENST00000493919 LY6G6CO95867 125 aa7.73□□□□□ -1.17
BRCA1-222ENST00000493919 PDE6GP18545 87 aa7.73□□□□□ -1.17
BRCA1-222ENST00000493919 LINC00167Q96N53 147 aa7.73□□□□□ -1.17
BRCA1-222ENST00000493919 APLNQ9ULZ1 77 aa7.73□□□□□ -1.17
BRCA1-222ENST00000493919 MUC4Q99102 2169 aa7.73□□□□□ -1.17
BRCA1-222ENST00000493919 LOC110117498A0A087WWA1 95 aa7.72□□□□□ -1.17
BRCA1-222ENST00000493919 NDUFA1O15239 70 aa7.72□□□□□ -1.17
BRCA1-222ENST00000493919 NDUFB1O75438 58 aa7.72□□□□□ -1.17
BRCA1-222ENST00000493919 LINC00476Q8WZB0 136 aa7.72□□□□□ -1.17
BRCA1-222ENST00000493919 TRGV4A0A0C4DH28 118 aa7.72□□□□□ -1.17
BRCA1-222ENST00000493919 RPL36AP83881 106 aaKnown RBP7.72□□□□□ -1.17
BRCA1-222ENST00000493919 Q9BRP9 147 aa7.72□□□□□ -1.17
BRCA1-222ENST00000493919 IGHV3-73A0A0B4J1V6 119 aa7.71□□□□□ -1.18
BRCA1-222ENST00000493919 TRBV10-1A0A0K0K1A3 114 aa7.7□□□□□ -1.18
BRCA1-222ENST00000493919 HIGD2AQ9BW72 106 aa7.7□□□□□ -1.18
BRCA1-222ENST00000493919 HAMPP81172 84 aa7.7□□□□□ -1.18
BRCA1-222ENST00000493919 FAM74A4Q5TZK3 123 aa7.7□□□□□ -1.18
BRCA1-222ENST00000493919 PRAC1Q96KF2 57 aa7.7□□□□□ -1.18
BRCA1-222ENST00000493919 UBE2DNLQ8IWF7 75 aa7.69□□□□□ -1.18
BRCA1-222ENST00000493919 Q8N814 137 aa7.69□□□□□ -1.18
BRCA1-222ENST00000493919 PRO0255Q9UI72 69 aa7.69□□□□□ -1.18
BRCA1-222ENST00000493919 KMT2AQ03164 3969 aa7.69□□□□□ -1.18
BRCA1-222ENST00000493919 A0A087WYN8 130 aa7.68□□□□□ -1.18
BRCA1-222ENST00000493919 TRBV6-5A0A0K0K1A5 114 aa7.68□□□□□ -1.18
BRCA1-222ENST00000493919 CRPP02741 224 aa7.68□□□□□ -1.18
BRCA1-222ENST00000493919 ZCCHC13Q8WW36 166 aaKnown RBP7.68□□□□□ -1.18
BRCA1-222ENST00000493919 IGHV3-64A0A075B6Q5 118 aa7.68□□□□□ -1.18
BRCA1-222ENST00000493919 RPL36ALQ969Q0 106 aaKnown RBP7.68□□□□□ -1.18
BRCA1-222ENST00000493919 IGKV2-29A2NJV5 120 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-222ENST00000493919 POLR2KP53803 58 aaKnown RBP7.67□□□□□ -1.18
BRCA1-222ENST00000493919 RNASE13Q5GAN3 156 aaKnown RBP7.67□□□□□ -1.18
BRCA1-222ENST00000493919 A0A096LPF7 62 aa7.66□□□□□ -1.18
BRCA1-222ENST00000493919 REG3AQ06141 175 aa7.66□□□□□ -1.18
BRCA1-222ENST00000493919 H3BNG1 76 aa7.65□□□□□ -1.18
BRCA1-222ENST00000493919 LECT2O14960 151 aa7.65□□□□□ -1.18
BRCA1-222ENST00000493919 LINC00242Q5T6M2 205 aa7.65□□□□□ -1.18
BRCA1-222ENST00000493919 Q6ZQT0 140 aa7.65□□□□□ -1.18
BRCA1-222ENST00000493919 RPL39LQ96EH5 51 aaKnown RBP7.65□□□□□ -1.18
BRCA1-222ENST00000493919 SND1-IT1Q9HBX3 110 aa7.64□□□□□ -1.19
BRCA1-222ENST00000493919 H3BQ85 93 aa7.64□□□□□ -1.19
BRCA1-222ENST00000493919 K7EQD1 137 aa7.64□□□□□ -1.19
BRCA1-222ENST00000493919 CCL18P55774 89 aa7.64□□□□□ -1.19
BRCA1-222ENST00000493919 DNAH6Q9C0G6 4158 aa7.63□□□□□ -1.19
BRCA1-222ENST00000493919 SEC61BP60468 96 aaKnown RBP7.63□□□□□ -1.19
BRCA1-222ENST00000493919 XAGE1AQ9HD64 81 aa7.63□□□□□ -1.19
BRCA1-222ENST00000493919 DNAH2Q9P225 4427 aa7.63□□□□□ -1.19
BRCA1-222ENST00000493919 TRBV6-4A0A1B0GX49 114 aa7.62□□□□□ -1.19
BRCA1-222ENST00000493919 RPL39P62891 51 aaKnown RBP7.62□□□□□ -1.19
BRCA1-222ENST00000493919 Q6ZSN1 163 aa7.62□□□□□ -1.19
BRCA1-222ENST00000493919 C20orf203Q8NBC4 194 aa7.62□□□□□ -1.19
BRCA1-222ENST00000493919 MGPP08493 103 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms