RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 KRTAP13-1Q8IUC0 172 aa10.84□□□□□ -0.67
PDLIM7-208ENST00000493815 SMIM6P0DI80 62 aa10.83□□□□□ -0.68
PDLIM7-208ENST00000493815 RPL28P46779 137 aaKnown RBP10.83□□□□□ -0.68
PDLIM7-208ENST00000493815 TRAV23DV6A0A075B6W5 121 aa10.82□□□□□ -0.68
PDLIM7-208ENST00000493815 SPRR1AP35321 89 aa10.82□□□□□ -0.68
PDLIM7-208ENST00000493815 DIRC1Q969H9 104 aa10.82□□□□□ -0.68
PDLIM7-208ENST00000493815 C12orf57Q99622 126 aa10.82□□□□□ -0.68
PDLIM7-208ENST00000493815 A6NDN8 102 aa10.82□□□□□ -0.68
PDLIM7-208ENST00000493815 H0Y9J4 135 aa10.82□□□□□ -0.68
PDLIM7-208ENST00000493815 PRO1933Q9H354 126 aa10.82□□□□□ -0.68
PDLIM7-208ENST00000493815 KRTAP4-16G5E9R7 235 aaPredicted RBP10.81□□□□□ -0.68
PDLIM7-208ENST00000493815 ETDCA0A1B0GVM5 59 aa10.8□□□□□ -0.68
PDLIM7-208ENST00000493815 UQCR10Q9UDW1 63 aa10.8□□□□□ -0.68
PDLIM7-208ENST00000493815 FAT3Q8TDW7 4589 aa10.8□□□□□ -0.68
PDLIM7-208ENST00000493815 ZNF73O43830 326 aaPredicted RBP10.79□□□□□ -0.68
PDLIM7-208ENST00000493815 HIGD2AQ9BW72 106 aa10.78□□□□□ -0.68
PDLIM7-208ENST00000493815 TRAV13-2A0A0B4J235 113 aa10.76□□□□□ -0.69
PDLIM7-208ENST00000493815 B5MCH6 92 aa10.76□□□□□ -0.69
PDLIM7-208ENST00000493815 CEND1Q8N111 149 aa10.76□□□□□ -0.69
PDLIM7-208ENST00000493815 TAL2Q16559 108 aa10.75□□□□□ -0.69
PDLIM7-208ENST00000493815 C6orf99Q4VX62 202 aa10.74□□□□□ -0.69
PDLIM7-208ENST00000493815 KRTAP29-1A8MX34 341 aaPredicted RBP10.73□□□□□ -0.69
PDLIM7-208ENST00000493815 KRTAP1-4P0C5Y4 121 aa10.73□□□□□ -0.69
PDLIM7-208ENST00000493815 FXYD2P54710 66 aa10.73□□□□□ -0.69
PDLIM7-208ENST00000493815 Q6ZRX8 168 aa10.73□□□□□ -0.69
PDLIM7-208ENST00000493815 CBY1Q9Y3M2 126 aa10.73□□□□□ -0.69
PDLIM7-208ENST00000493815 OXTP01178 125 aa10.73□□□□□ -0.69
PDLIM7-208ENST00000493815 CFC1BP0CG36 223 aa10.73□□□□□ -0.69
PDLIM7-208ENST00000493815 CFC1P0CG37 223 aa10.73□□□□□ -0.69
PDLIM7-208ENST00000493815 SMIM11BQ8TCY0 68 aa10.73□□□□□ -0.69
PDLIM7-208ENST00000493815 SMCR5Q8TEV8 140 aa10.73□□□□□ -0.69
PDLIM7-208ENST00000493815 Q9BRP9 147 aa10.73□□□□□ -0.69
PDLIM7-208ENST00000493815 TMEM238LA0A1B0GVL6 79 aa10.72□□□□□ -0.69
PDLIM7-208ENST00000493815 HSD52Q0P140 79 aa10.72□□□□□ -0.69
PDLIM7-208ENST00000493815 ANAPC11Q9NYG5 84 aa10.72□□□□□ -0.69
PDLIM7-208ENST00000493815 RPL13AP40429 203 aaKnown RBP10.71□□□□□ -0.69
PDLIM7-208ENST00000493815 LINC01600Q96MT4 127 aa10.71□□□□□ -0.69
PDLIM7-208ENST00000493815 J3QL48 77 aa10.7□□□□□ -0.7
PDLIM7-208ENST00000493815 ERC2-IT1O76042 136 aa10.7□□□□□ -0.7
PDLIM7-208ENST00000493815 HINT1P49773 126 aaPredicted RBP10.7□□□□□ -0.7
PDLIM7-208ENST00000493815 H7C2G1 150 aa10.69□□□□□ -0.7
PDLIM7-208ENST00000493815 RAB37Q96AX2 223 aa10.69□□□□□ -0.7
PDLIM7-208ENST00000493815 MT1HL1P0DM35 61 aa10.68□□□□□ -0.7
PDLIM7-208ENST00000493815 PRR26Q8N8Z3 221 aa10.68□□□□□ -0.7
PDLIM7-208ENST00000493815 COX7BP24311 80 aa10.67□□□□□ -0.7
PDLIM7-208ENST00000493815 A6NJY4 79 aa10.66□□□□□ -0.7
PDLIM7-208ENST00000493815 ELOF1P60002 83 aaKnown RBP10.66□□□□□ -0.7
PDLIM7-208ENST00000493815 DMBT1Q9UGM3 2413 aaPredicted RBP10.66□□□□□ -0.7
PDLIM7-208ENST00000493815 A0A0B4J2C4 111 aa10.66□□□□□ -0.7
PDLIM7-208ENST00000493815 TNXBP22105 4242 aa10.65□□□□□ -0.7
PDLIM7-208ENST00000493815 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.7
PDLIM7-208ENST00000493815 K7ERJ3 54 aa10.64□□□□□ -0.71
PDLIM7-208ENST00000493815 A0A087X002 238 aa10.63□□□□□ -0.71
PDLIM7-208ENST00000493815 SPRR4Q96PI1 79 aa10.63□□□□□ -0.71
PDLIM7-208ENST00000493815 TSTD3H0UI37 97 aa10.63□□□□□ -0.71
PDLIM7-208ENST00000493815 KRTAP10-8P60410 259 aa10.63□□□□□ -0.71
PDLIM7-208ENST00000493815 TRBV7-6A0A0J9YX20 115 aa10.62□□□□□ -0.71
PDLIM7-208ENST00000493815 A0A1B0GWB2 263 aa10.62□□□□□ -0.71
PDLIM7-208ENST00000493815 BVES-AS1Q5T3Y7 98 aa10.62□□□□□ -0.71
PDLIM7-208ENST00000493815 ST20-AS1Q8NBB2 130 aa10.62□□□□□ -0.71
PDLIM7-208ENST00000493815 PRO1854Q9UHT4 67 aa10.61□□□□□ -0.71
PDLIM7-208ENST00000493815 GAGE2AQ6NT46 116 aa10.6□□□□□ -0.71
PDLIM7-208ENST00000493815 DHRS4-AS1Q9P1J3 65 aa10.6□□□□□ -0.71
PDLIM7-208ENST00000493815 Q1RN00 199 aa10.6□□□□□ -0.71
PDLIM7-208ENST00000493815 ZNF706Q9Y5V0 76 aaPredicted RBP10.6□□□□□ -0.71
PDLIM7-208ENST00000493815 HERC1Q15751 4861 aa10.59□□□□□ -0.71
PDLIM7-208ENST00000493815 CRYGAP11844 174 aa10.58□□□□□ -0.72
PDLIM7-208ENST00000493815 VAMP3Q15836 100 aa10.58□□□□□ -0.72
PDLIM7-208ENST00000493815 KRTAP13-2Q52LG2 175 aa10.57□□□□□ -0.72
PDLIM7-208ENST00000493815 FAM229BQ4G0N7 80 aa10.56□□□□□ -0.72
PDLIM7-208ENST00000493815 LINC00483Q53H64 154 aa10.54□□□□□ -0.72
PDLIM7-208ENST00000493815 C3orf22Q8N5N4 141 aa10.54□□□□□ -0.72
PDLIM7-208ENST00000493815 LINC00575Q6W349 94 aa10.53□□□□□ -0.72
PDLIM7-208ENST00000493815 DEFB105AQ8NG35 78 aa10.53□□□□□ -0.72
PDLIM7-208ENST00000493815 TYMSOSQ8TAI1 123 aa10.53□□□□□ -0.72
PDLIM7-208ENST00000493815 M0R143 59 aa10.52□□□□□ -0.73
PDLIM7-208ENST00000493815 TRIAP1O43715 76 aa10.51□□□□□ -0.73
PDLIM7-208ENST00000493815 SLC25A20O43772 301 aa10.51□□□□□ -0.73
PDLIM7-208ENST00000493815 TSPAN13O95857 204 aa10.51□□□□□ -0.73
PDLIM7-208ENST00000493815 PCP4P48539 62 aa10.51□□□□□ -0.73
PDLIM7-208ENST00000493815 hADV29S1A0JD25 119 aa10.5□□□□□ -0.73
PDLIM7-208ENST00000493815 IGLV9-49A0A0B4J1Y8 123 aa10.49□□□□□ -0.73
PDLIM7-208ENST00000493815 BATFQ16520 125 aa10.49□□□□□ -0.73
PDLIM7-208ENST00000493815 FAM218AQ96MZ4 157 aa10.49□□□□□ -0.73
PDLIM7-208ENST00000493815 PSMB2P49721 201 aa10.48□□□□□ -0.73
PDLIM7-208ENST00000493815 LINC01547P58512 204 aaPredicted RBP10.47□□□□□ -0.73
PDLIM7-208ENST00000493815 Q6ZQY7 126 aa10.47□□□□□ -0.73
PDLIM7-208ENST00000493815 H0YGX0 51 aa10.46□□□□□ -0.74
PDLIM7-208ENST00000493815 SPRR1BP22528 89 aa10.45□□□□□ -0.74
PDLIM7-208ENST00000493815 MOBPQ13875 183 aa10.45□□□□□ -0.74
PDLIM7-208ENST00000493815 CLEC2BQ92478 149 aa10.45□□□□□ -0.74
PDLIM7-208ENST00000493815 TEX49A0A1B0GTD5 131 aa10.44□□□□□ -0.74
PDLIM7-208ENST00000493815 IGLV5-48A0A075B6I7 105 aa10.44□□□□□ -0.74
PDLIM7-208ENST00000493815 Q8N377 158 aa10.44□□□□□ -0.74
PDLIM7-208ENST00000493815 NAA38Q9BRA0 125 aaKnown RBP10.43□□□□□ -0.74
PDLIM7-208ENST00000493815 C9orf153Q5TBE3 101 aa10.42□□□□□ -0.74
PDLIM7-208ENST00000493815 Q8NBF4 154 aa10.41□□□□□ -0.74
PDLIM7-208ENST00000493815 SMIM29Q86T20 159 aa10.41□□□□□ -0.74
PDLIM7-208ENST00000493815 COX6CP09669 75 aa10.4□□□□□ -0.74
PDLIM7-208ENST00000493815 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms