RNA–Protein interactions for RNA: ENST00000493699.1

HLA-E-203, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 907 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-203ENST00000493699 C4orf48Q5BLP8 95 aa12.54□□□□□ -0.4
HLA-E-203ENST00000493699 S100A7L2Q5SY68 101 aa12.54□□□□□ -0.4
HLA-E-203ENST00000493699 LINC01545Q5VT33 79 aa12.54□□□□□ -0.4
HLA-E-203ENST00000493699 LITAFQ99732 161 aa12.53□□□□□ -0.4
HLA-E-203ENST00000493699 CDIP1Q9H305 208 aa12.53□□□□□ -0.4
HLA-E-203ENST00000493699 MUC17Q685J3 4493 aa12.51□□□□□ -0.41
HLA-E-203ENST00000493699 TRAV23DV6A0A075B6W5 121 aa12.51□□□□□ -0.41
HLA-E-203ENST00000493699 PET117Q6UWS5 81 aa12.51□□□□□ -0.41
HLA-E-203ENST00000493699 SPINK1P00995 79 aa12.5□□□□□ -0.41
HLA-E-203ENST00000493699 ZNF73O43830 326 aaPredicted RBP12.49□□□□□ -0.41
HLA-E-203ENST00000493699 FP248Q71RG6 208 aaPredicted RBP12.49□□□□□ -0.41
HLA-E-203ENST00000493699 TIMM17BO60830 172 aa12.48□□□□□ -0.41
HLA-E-203ENST00000493699 SSBP3-AS1Q7Z2R9 100 aa12.48□□□□□ -0.41
HLA-E-203ENST00000493699 LINC00308Q8TCZ7 52 aa12.48□□□□□ -0.41
HLA-E-203ENST00000493699 JOSD1Q15040 202 aaPredicted RBP12.47□□□□□ -0.41
HLA-E-203ENST00000493699 IGLV9-49A0A0B4J1Y8 123 aa12.46□□□□□ -0.41
HLA-E-203ENST00000493699 C3orf79P0CE67 100 aa12.46□□□□□ -0.41
HLA-E-203ENST00000493699 MOBPQ13875 183 aa12.46□□□□□ -0.41
HLA-E-203ENST00000493699 COA6Q5JTJ3 125 aaKnown RBP12.46□□□□□ -0.41
HLA-E-203ENST00000493699 SPANXCQ9NY87 97 aa12.46□□□□□ -0.41
HLA-E-203ENST00000493699 A0A0U1RQV1 116 aa12.44□□□□□ -0.42
HLA-E-203ENST00000493699 TTTY13Q9BZ97 58 aa12.44□□□□□ -0.42
HLA-E-203ENST00000493699 ZNF815PA8K554 130 aa12.42□□□□□ -0.42
HLA-E-203ENST00000493699 RPS29P62273 56 aaKnown RBP12.42□□□□□ -0.42
HLA-E-203ENST00000493699 CBY1Q9Y3M2 126 aa12.42□□□□□ -0.42
HLA-E-203ENST00000493699 C5orf52A6NGY3 159 aa12.4□□□□□ -0.42
HLA-E-203ENST00000493699 KRTAP13-3Q3SY46 172 aa12.4□□□□□ -0.42
HLA-E-203ENST00000493699 ST20-AS1Q8NBB2 130 aa12.4□□□□□ -0.42
HLA-E-203ENST00000493699 HINT1P49773 126 aaPredicted RBP12.39□□□□□ -0.43
HLA-E-203ENST00000493699 Q8N377 158 aa12.39□□□□□ -0.43
HLA-E-203ENST00000493699 FAT4Q6V0I7 4981 aa12.39□□□□□ -0.43
HLA-E-203ENST00000493699 OR13C6PQ8NH95 151 aa12.38□□□□□ -0.43
HLA-E-203ENST00000493699 KRTDAPP60985 99 aa12.37□□□□□ -0.43
HLA-E-203ENST00000493699 SPANXDQ9BXN6 97 aa12.37□□□□□ -0.43
HLA-E-203ENST00000493699 LCE2AQ5TA79 106 aaPredicted RBP12.34□□□□□ -0.43
HLA-E-203ENST00000493699 LINC00518Q8N0U6 118 aa12.34□□□□□ -0.43
HLA-E-203ENST00000493699 SPRR1BP22528 89 aa12.33□□□□□ -0.44
HLA-E-203ENST00000493699 DHRS4-AS1Q9P1J3 65 aa12.33□□□□□ -0.44
HLA-E-203ENST00000493699 SLC25A20O43772 301 aa12.32□□□□□ -0.44
HLA-E-203ENST00000493699 ANKRD39Q53RE8 183 aa12.32□□□□□ -0.44
HLA-E-203ENST00000493699 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
HLA-E-203ENST00000493699 ELOF1P60002 83 aaKnown RBP12.3□□□□□ -0.44
HLA-E-203ENST00000493699 C20orf202A1L168 122 aa12.29□□□□□ -0.44
HLA-E-203ENST00000493699 C6orf99Q4VX62 202 aa12.29□□□□□ -0.44
HLA-E-203ENST00000493699 SCGB1D4Q6XE38 83 aa12.29□□□□□ -0.44
HLA-E-203ENST00000493699 COX7BP24311 80 aa12.27□□□□□ -0.45
HLA-E-203ENST00000493699 ASB16-AS1Q495Z4 193 aa12.27□□□□□ -0.45
HLA-E-203ENST00000493699 ATOH7Q8N100 152 aa12.27□□□□□ -0.45
HLA-E-203ENST00000493699 IFITM1P13164 125 aa12.26□□□□□ -0.45
HLA-E-203ENST00000493699 PCP2Q8IVA1 136 aa12.25□□□□□ -0.45
HLA-E-203ENST00000493699 TRBV7-6A0A0J9YX20 115 aa12.24□□□□□ -0.45
HLA-E-203ENST00000493699 SLC25A34Q6PIV7 304 aa12.24□□□□□ -0.45
HLA-E-203ENST00000493699 Q6ZVH6 145 aa12.24□□□□□ -0.45
HLA-E-203ENST00000493699 COPS9Q8WXC6 57 aa12.23□□□□□ -0.45
HLA-E-203ENST00000493699 AKR1D1P51857 326 aa12.22□□□□□ -0.45
HLA-E-203ENST00000493699 MUSTN1Q8IVN3 82 aa12.22□□□□□ -0.45
HLA-E-203ENST00000493699 LAMTOR3Q9UHA4 124 aa12.22□□□□□ -0.45
HLA-E-203ENST00000493699 A6NDN8 102 aa12.18□□□□□ -0.46
HLA-E-203ENST00000493699 TAL2Q16559 108 aa12.18□□□□□ -0.46
HLA-E-203ENST00000493699 KRTAP4-1Q9BYQ7 146 aa12.18□□□□□ -0.46
HLA-E-203ENST00000493699 TEX49A0A1B0GTD5 131 aa12.17□□□□□ -0.46
HLA-E-203ENST00000493699 A0A1B0GWB2 263 aa12.17□□□□□ -0.46
HLA-E-203ENST00000493699 SEC61BP60468 96 aaKnown RBP12.17□□□□□ -0.46
HLA-E-203ENST00000493699 SNRPEP62304 92 aaKnown RBP12.17□□□□□ -0.46
HLA-E-203ENST00000493699 XP32Q5T750 250 aa12.17□□□□□ -0.46
HLA-E-203ENST00000493699 DEFB105AQ8NG35 78 aa12.17□□□□□ -0.46
HLA-E-203ENST00000493699 Q1RN00 199 aa12.16□□□□□ -0.46
HLA-E-203ENST00000493699 HRCT1Q6UXD1 115 aa12.16□□□□□ -0.46
HLA-E-203ENST00000493699 SMIM29Q86T20 159 aa12.16□□□□□ -0.46
HLA-E-203ENST00000493699 LINC01547P58512 204 aaPredicted RBP12.15□□□□□ -0.46
HLA-E-203ENST00000493699 HIST3H2BBQ8N257 126 aa12.15□□□□□ -0.46
HLA-E-203ENST00000493699 LIMD2Q9BT23 127 aa12.14□□□□□ -0.47
HLA-E-203ENST00000493699 IGLV5-48A0A075B6I7 105 aa12.13□□□□□ -0.47
HLA-E-203ENST00000493699 HIST1H2BLQ99880 126 aa12.13□□□□□ -0.47
HLA-E-203ENST00000493699 CD164Q04900 197 aa12.12□□□□□ -0.47
HLA-E-203ENST00000493699 TRAV13-2A0A0B4J235 113 aa12.11□□□□□ -0.47
HLA-E-203ENST00000493699 SMIM11BQ8TCY0 68 aa12.11□□□□□ -0.47
HLA-E-203ENST00000493699 PRO1933Q9H354 126 aa12.11□□□□□ -0.47
HLA-E-203ENST00000493699 A4D1N5 150 aa12.1□□□□□ -0.47
HLA-E-203ENST00000493699 S100A2P29034 98 aa12.07□□□□□ -0.48
HLA-E-203ENST00000493699 KRTAP9-2Q9BYQ4 174 aa12.07□□□□□ -0.48
HLA-E-203ENST00000493699 Q5XG85 94 aa12.05□□□□□ -0.48
HLA-E-203ENST00000493699 H7C2G1 150 aa12.04□□□□□ -0.48
HLA-E-203ENST00000493699 NHP2Q9NX24 153 aaKnown RBP12.04□□□□□ -0.48
HLA-E-203ENST00000493699 A0A0G2JQZ4 141 aa12.02□□□□□ -0.49
HLA-E-203ENST00000493699 HSBP1L1C9JCN9 74 aa12.02□□□□□ -0.49
HLA-E-203ENST00000493699 S100A1P23297 94 aa12.01□□□□□ -0.49
HLA-E-203ENST00000493699 C9orf92A6NGG3 77 aa11.98□□□□□ -0.49
HLA-E-203ENST00000493699 S100A6P06703 90 aa11.98□□□□□ -0.49
HLA-E-203ENST00000493699 VAMP3Q15836 100 aa11.98□□□□□ -0.49
HLA-E-203ENST00000493699 C1orf195Q5TG92 126 aa11.98□□□□□ -0.49
HLA-E-203ENST00000493699 LINC00575Q6W349 94 aa11.98□□□□□ -0.49
HLA-E-203ENST00000493699 hADV29S1A0JD25 119 aa11.92□□□□□ -0.5
HLA-E-203ENST00000493699 PCOTHQ58A44 107 aa11.92□□□□□ -0.5
HLA-E-203ENST00000493699 Q6ZQY7 126 aa11.91□□□□□ -0.5
HLA-E-203ENST00000493699 SCGB1D1O95968 90 aa11.9□□□□□ -0.5
HLA-E-203ENST00000493699 COX8AP10176 69 aa11.89□□□□□ -0.51
HLA-E-203ENST00000493699 LCE2CQ5TA81 110 aa11.89□□□□□ -0.51
HLA-E-203ENST00000493699 HIST1H4GQ99525 98 aa11.88□□□□□ -0.51
HLA-E-203ENST00000493699 IGLV8-61A0A075B6I0 122 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms