RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 PDZD11Q5EBL8 140 aa2.24□□□□□ -2.05
CLIP4-212ENST00000493551 ERG28Q9UKR5 140 aa2.24□□□□□ -2.05
CLIP4-212ENST00000493551 CHTOPQ9Y3Y2 248 aaKnown RBP2.24□□□□□ -2.05
CLIP4-212ENST00000493551 A0A1B0GXF2 115 aa2.23□□□□□ -2.05
CLIP4-212ENST00000493551 SMIM27A0A1W2PRY6 76 aa2.23□□□□□ -2.05
CLIP4-212ENST00000493551 SRP19P09132 144 aaKnown RBP2.23□□□□□ -2.05
CLIP4-212ENST00000493551 TAGLN2P37802 199 aaKnown RBP2.23□□□□□ -2.05
CLIP4-212ENST00000493551 NDUFA6P56556 154 aa2.23□□□□□ -2.05
CLIP4-212ENST00000493551 LINC00158P58513 81 aa2.23□□□□□ -2.05
CLIP4-212ENST00000493551 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
CLIP4-212ENST00000493551 Q75L30 129 aa2.23□□□□□ -2.05
CLIP4-212ENST00000493551 Q8N8P6 123 aa2.23□□□□□ -2.05
CLIP4-212ENST00000493551 ST20-AS1Q8NBB2 130 aa2.23□□□□□ -2.05
CLIP4-212ENST00000493551 SCGB3A1Q96QR1 104 aa2.23□□□□□ -2.05
CLIP4-212ENST00000493551 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
CLIP4-212ENST00000493551 A0A0G2JQZ4 141 aa2.22□□□□□ -2.05
CLIP4-212ENST00000493551 TRBV10-3A0A0K0K1G6 114 aa2.22□□□□□ -2.05
CLIP4-212ENST00000493551 C9JQL5 133 aa2.22□□□□□ -2.05
CLIP4-212ENST00000493551 PPBPP02775 128 aa2.22□□□□□ -2.05
CLIP4-212ENST00000493551 SEC11AP67812 179 aa2.22□□□□□ -2.05
CLIP4-212ENST00000493551 PMVKQ15126 192 aa2.22□□□□□ -2.05
CLIP4-212ENST00000493551 RGS21Q2M5E4 152 aa2.22□□□□□ -2.05
CLIP4-212ENST00000493551 LINC00483Q53H64 154 aa2.22□□□□□ -2.05
CLIP4-212ENST00000493551 BOD1L2Q8IYS8 172 aa2.22□□□□□ -2.05
CLIP4-212ENST00000493551 FLGP20930 4061 aaPredicted RBP2.22□□□□□ -2.05
CLIP4-212ENST00000493551 TINCRA0A1B0GVN0 87 aa2.21□□□□□ -2.06
CLIP4-212ENST00000493551 A0A1B0GW15 77 aa2.21□□□□□ -2.06
CLIP4-212ENST00000493551 MT2AP02795 61 aa2.21□□□□□ -2.06
CLIP4-212ENST00000493551 S100A8P05109 93 aa2.21□□□□□ -2.06
CLIP4-212ENST00000493551 RPL37P61927 97 aaKnown RBP2.21□□□□□ -2.06
CLIP4-212ENST00000493551 ORMDL2Q53FV1 153 aa2.21□□□□□ -2.06
CLIP4-212ENST00000493551 SSBP3-AS1Q7Z2R9 100 aa2.21□□□□□ -2.06
CLIP4-212ENST00000493551 Q9BRP9 147 aa2.21□□□□□ -2.06
CLIP4-212ENST00000493551 CST9LQ9H4G1 147 aa2.21□□□□□ -2.06
CLIP4-212ENST00000493551 H3BRM9 83 aa2.2□□□□□ -2.06
CLIP4-212ENST00000493551 ATP6V1G1O75348 118 aa2.2□□□□□ -2.06
CLIP4-212ENST00000493551 MT1FP04733 61 aa2.2□□□□□ -2.06
CLIP4-212ENST00000493551 SMIM13P0DJ93 91 aa2.2□□□□□ -2.06
CLIP4-212ENST00000493551 RPS29P62273 56 aaKnown RBP2.2□□□□□ -2.06
CLIP4-212ENST00000493551 SLC51BQ86UW2 128 aa2.2□□□□□ -2.06
CLIP4-212ENST00000493551 TOMM6Q96B49 74 aa2.2□□□□□ -2.06
CLIP4-212ENST00000493551 NAT8Q9UHE5 227 aa2.2□□□□□ -2.06
CLIP4-212ENST00000493551 ZNF22P17026 224 aaPredicted RBP2.19□□□□□ -2.06
CLIP4-212ENST00000493551 KRTAP10-10P60014 251 aa2.19□□□□□ -2.06
CLIP4-212ENST00000493551 Q1RN00 199 aa2.19□□□□□ -2.06
CLIP4-212ENST00000493551 MEIG1Q5JSS6 88 aa2.19□□□□□ -2.06
CLIP4-212ENST00000493551 TMEM170BQ5T4T1 132 aa2.19□□□□□ -2.06
CLIP4-212ENST00000493551 ERASQ7Z444 233 aa2.19□□□□□ -2.06
CLIP4-212ENST00000493551 MIR7-3HGQ8N6C7 128 aa2.19□□□□□ -2.06
CLIP4-212ENST00000493551 LIMD2Q9BT23 127 aa2.19□□□□□ -2.06
CLIP4-212ENST00000493551 TRAV9-1A0A075B6T8 112 aa2.18□□□□□ -2.06
CLIP4-212ENST00000493551 SPRR1AP35321 89 aa2.18□□□□□ -2.06
CLIP4-212ENST00000493551 PMCHL1Q16048 86 aa2.18□□□□□ -2.06
CLIP4-212ENST00000493551 DEFB105AQ8NG35 78 aa2.18□□□□□ -2.06
CLIP4-212ENST00000493551 KCNQ1DNQ9H478 68 aa2.18□□□□□ -2.06
CLIP4-212ENST00000493551 NXT2Q9NPJ8 142 aaKnown RBP2.18□□□□□ -2.06
CLIP4-212ENST00000493551 C11orf86A6NJI1 115 aa2.17□□□□□ -2.06
CLIP4-212ENST00000493551 IGLC3P0DOY3 106 aa2.17□□□□□ -2.06
CLIP4-212ENST00000493551 DDTP30046 118 aa2.17□□□□□ -2.06
CLIP4-212ENST00000493551 NPC2P61916 151 aa2.17□□□□□ -2.06
CLIP4-212ENST00000493551 C1orf195Q5TG92 126 aa2.17□□□□□ -2.06
CLIP4-212ENST00000493551 Q6ZRX8 168 aa2.17□□□□□ -2.06
CLIP4-212ENST00000493551 LAMTOR2Q9Y2Q5 125 aa2.17□□□□□ -2.06
CLIP4-212ENST00000493551 NEBP20929 6669 aa2.16□□□□□ -2.06
CLIP4-212ENST00000493551 FAM236DA0A1B0GTK5 79 aa2.16□□□□□ -2.06
CLIP4-212ENST00000493551 FAM236CP0DP71 79 aa2.16□□□□□ -2.06
CLIP4-212ENST00000493551 LGALS3P17931 250 aaKnown RBP2.16□□□□□ -2.06
CLIP4-212ENST00000493551 S100A12P80511 92 aa2.16□□□□□ -2.06
CLIP4-212ENST00000493551 COX17Q14061 63 aa2.16□□□□□ -2.06
CLIP4-212ENST00000493551 KRTAP6-3Q3LI67 103 aa2.16□□□□□ -2.06
CLIP4-212ENST00000493551 S100A7L2Q5SY68 101 aa2.16□□□□□ -2.06
CLIP4-212ENST00000493551 FA2HQ7L5A8 372 aa2.16□□□□□ -2.06
CLIP4-212ENST00000493551 ATP5L2Q7Z4Y8 100 aa2.16□□□□□ -2.06
CLIP4-212ENST00000493551 PCP2Q8IVA1 136 aa2.16□□□□□ -2.06
CLIP4-212ENST00000493551 SMCO4Q9NRQ5 59 aa2.16□□□□□ -2.06
CLIP4-212ENST00000493551 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
CLIP4-212ENST00000493551 BAGE3Q86Y29 109 aa2.15□□□□□ -2.07
CLIP4-212ENST00000493551 OBSCN-AS1Q96MR7 158 aa2.15□□□□□ -2.07
CLIP4-212ENST00000493551 TRAV23DV6A0A075B6W5 121 aa2.14□□□□□ -2.07
CLIP4-212ENST00000493551 C20orf202A1L168 122 aa2.14□□□□□ -2.07
CLIP4-212ENST00000493551 K7EMI3 77 aa2.14□□□□□ -2.07
CLIP4-212ENST00000493551 G0S2P27469 103 aa2.14□□□□□ -2.07
CLIP4-212ENST00000493551 PEA15Q15121 130 aa2.14□□□□□ -2.07
CLIP4-212ENST00000493551 ATP11AUNQ6ZP68 121 aa2.14□□□□□ -2.07
CLIP4-212ENST00000493551 TCTE3Q8IZS6 198 aa2.14□□□□□ -2.07
CLIP4-212ENST00000493551 LAMTOR3Q9UHA4 124 aa2.14□□□□□ -2.07
CLIP4-212ENST00000493551 H0Y8G0 127 aa2.13□□□□□ -2.07
CLIP4-212ENST00000493551 TAL2Q16559 108 aa2.13□□□□□ -2.07
CLIP4-212ENST00000493551 KRTAP19-6Q3LI70 58 aa2.13□□□□□ -2.07
CLIP4-212ENST00000493551 OR13C6PQ8NH95 151 aa2.13□□□□□ -2.07
CLIP4-212ENST00000493551 C20orf166-AS1Q96NR2 134 aa2.13□□□□□ -2.07
CLIP4-212ENST00000493551 LINC00846Q9NV44 126 aa2.13□□□□□ -2.07
CLIP4-212ENST00000493551 TRBV20-1A0A075B6N2 111 aa2.12□□□□□ -2.07
CLIP4-212ENST00000493551 A0A096LNJ9 63 aa2.12□□□□□ -2.07
CLIP4-212ENST00000493551 TMEM223A0PJW6 202 aa2.12□□□□□ -2.07
CLIP4-212ENST00000493551 ZNF73O43830 326 aaPredicted RBP2.12□□□□□ -2.07
CLIP4-212ENST00000493551 MT-ND4LP03901 98 aa2.12□□□□□ -2.07
CLIP4-212ENST00000493551 TSPEAR-AS2P59090 65 aa2.12□□□□□ -2.07
CLIP4-212ENST00000493551 JOSD1Q15040 202 aaPredicted RBP2.12□□□□□ -2.07
CLIP4-212ENST00000493551 MIEN1Q9BRT3 115 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms