RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 SPANXB1Q9NS25 103 aaPredicted RBP6.63□□□□□ -1.35
LRTM1-202ENST00000493075 B5MCH6 92 aa6.62□□□□□ -1.35
LRTM1-202ENST00000493075 SYS1-DBNDD2H3BUS1 97 aa6.62□□□□□ -1.35
LRTM1-202ENST00000493075 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
LRTM1-202ENST00000493075 A0A0J9YXY3 114 aa6.61□□□□□ -1.35
LRTM1-202ENST00000493075 HIST1H2BKO60814 126 aa6.61□□□□□ -1.35
LRTM1-202ENST00000493075 IGLV6-57P01721 117 aa6.61□□□□□ -1.35
LRTM1-202ENST00000493075 HIST1H2BJP06899 126 aa6.61□□□□□ -1.35
LRTM1-202ENST00000493075 HIST1H2BOP23527 126 aa6.61□□□□□ -1.35
LRTM1-202ENST00000493075 HIST1H2BBP33778 126 aa6.61□□□□□ -1.35
LRTM1-202ENST00000493075 HIST1H2BDP58876 126 aa6.61□□□□□ -1.35
LRTM1-202ENST00000493075 HIST1H2BCP62807 126 aa6.61□□□□□ -1.35
LRTM1-202ENST00000493075 HIST2H2BEQ16778 126 aa6.61□□□□□ -1.35
LRTM1-202ENST00000493075 LINC00483Q53H64 154 aa6.61□□□□□ -1.35
LRTM1-202ENST00000493075 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.61□□□□□ -1.35
LRTM1-202ENST00000493075 HIST1H2BHQ93079 126 aa6.61□□□□□ -1.35
LRTM1-202ENST00000493075 HIST1H2BNQ99877 126 aa6.61□□□□□ -1.35
LRTM1-202ENST00000493075 HIST1H2BMQ99879 126 aa6.61□□□□□ -1.35
LRTM1-202ENST00000493075 TPRXLQ17RH7 258 aa6.6□□□□□ -1.35
LRTM1-202ENST00000493075 KRTAP5-3Q6L8H2 238 aa6.6□□□□□ -1.35
LRTM1-202ENST00000493075 RETNLBQ9BQ08 111 aa6.6□□□□□ -1.35
LRTM1-202ENST00000493075 IGLV7-46A0A075B6I9 117 aa6.59□□□□□ -1.35
LRTM1-202ENST00000493075 S100A7L2Q5SY68 101 aa6.59□□□□□ -1.35
LRTM1-202ENST00000493075 ADAMTSL4-AS1Q5T5F5 129 aa6.59□□□□□ -1.35
LRTM1-202ENST00000493075 LINC01545Q5VT33 79 aa6.58□□□□□ -1.36
LRTM1-202ENST00000493075 SOSTDC1Q6X4U4 206 aa6.58□□□□□ -1.36
LRTM1-202ENST00000493075 Q6ZRX8 168 aa6.58□□□□□ -1.36
LRTM1-202ENST00000493075 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
LRTM1-202ENST00000493075 PPDPFQ9H3Y8 114 aa6.58□□□□□ -1.36
LRTM1-202ENST00000493075 CBY1Q9Y3M2 126 aa6.58□□□□□ -1.36
LRTM1-202ENST00000493075 TIMM17BO60830 172 aa6.57□□□□□ -1.36
LRTM1-202ENST00000493075 ERC2-IT1O76042 136 aa6.57□□□□□ -1.36
LRTM1-202ENST00000493075 SPINK1P00995 79 aa6.57□□□□□ -1.36
LRTM1-202ENST00000493075 JOSD1Q15040 202 aaPredicted RBP6.57□□□□□ -1.36
LRTM1-202ENST00000493075 GAGE2AQ6NT46 116 aa6.57□□□□□ -1.36
LRTM1-202ENST00000493075 SSBP3-AS1Q7Z2R9 100 aa6.57□□□□□ -1.36
LRTM1-202ENST00000493075 Q8NBF4 154 aa6.57□□□□□ -1.36
LRTM1-202ENST00000493075 Q9BRP9 147 aa6.57□□□□□ -1.36
LRTM1-202ENST00000493075 TRAV23DV6A0A075B6W5 121 aa6.56□□□□□ -1.36
LRTM1-202ENST00000493075 FP248Q71RG6 208 aaPredicted RBP6.56□□□□□ -1.36
LRTM1-202ENST00000493075 LITAFQ99732 161 aa6.56□□□□□ -1.36
LRTM1-202ENST00000493075 C5orf52A6NGY3 159 aa6.55□□□□□ -1.36
LRTM1-202ENST00000493075 ZNF73O43830 326 aaPredicted RBP6.55□□□□□ -1.36
LRTM1-202ENST00000493075 COA6Q5JTJ3 125 aaKnown RBP6.55□□□□□ -1.36
LRTM1-202ENST00000493075 A0A0U1RQV1 116 aa6.54□□□□□ -1.36
LRTM1-202ENST00000493075 NPC2P61916 151 aa6.54□□□□□ -1.36
LRTM1-202ENST00000493075 LINC00308Q8TCZ7 52 aa6.54□□□□□ -1.36
LRTM1-202ENST00000493075 SPANXCQ9NY87 97 aa6.54□□□□□ -1.36
LRTM1-202ENST00000493075 MUC2Q02817 5179 aa6.54□□□□□ -1.36
LRTM1-202ENST00000493075 C3orf79P0CE67 100 aa6.53□□□□□ -1.36
LRTM1-202ENST00000493075 HINT1P49773 126 aaPredicted RBP6.53□□□□□ -1.36
LRTM1-202ENST00000493075 RPS29P62273 56 aaKnown RBP6.53□□□□□ -1.36
LRTM1-202ENST00000493075 ZNF815PA8K554 130 aa6.52□□□□□ -1.37
LRTM1-202ENST00000493075 KRTAP9-9Q9BYP9 154 aa6.52□□□□□ -1.37
LRTM1-202ENST00000493075 KRTAP9-4Q9BYQ2 154 aa6.52□□□□□ -1.37
LRTM1-202ENST00000493075 IGLV9-49A0A0B4J1Y8 123 aa6.51□□□□□ -1.37
LRTM1-202ENST00000493075 MOBPQ13875 183 aa6.51□□□□□ -1.37
LRTM1-202ENST00000493075 LINC00518Q8N0U6 118 aa6.51□□□□□ -1.37
LRTM1-202ENST00000493075 OR13C6PQ8NH95 151 aa6.5□□□□□ -1.37
LRTM1-202ENST00000493075 SPANXDQ9BXN6 97 aa6.5□□□□□ -1.37
LRTM1-202ENST00000493075 KRTDAPP60985 99 aa6.5□□□□□ -1.37
LRTM1-202ENST00000493075 C20orf202A1L168 122 aa6.49□□□□□ -1.37
LRTM1-202ENST00000493075 AKR1D1P51857 326 aa6.49□□□□□ -1.37
LRTM1-202ENST00000493075 TTTY13Q9BZ97 58 aa6.49□□□□□ -1.37
LRTM1-202ENST00000493075 DHRS4-AS1Q9P1J3 65 aa6.49□□□□□ -1.37
LRTM1-202ENST00000493075 SLC25A20O43772 301 aa6.48□□□□□ -1.37
LRTM1-202ENST00000493075 SPRR1BP22528 89 aa6.48□□□□□ -1.37
LRTM1-202ENST00000493075 KRTAP13-3Q3SY46 172 aa6.48□□□□□ -1.37
LRTM1-202ENST00000493075 Q8N377 158 aa6.48□□□□□ -1.37
LRTM1-202ENST00000493075 ST20-AS1Q8NBB2 130 aa6.48□□□□□ -1.37
LRTM1-202ENST00000493075 COPS9Q8WXC6 57 aa6.48□□□□□ -1.37
LRTM1-202ENST00000493075 MUC17Q685J3 4493 aa6.47□□□□□ -1.37
LRTM1-202ENST00000493075 IFITM1P13164 125 aa6.47□□□□□ -1.37
LRTM1-202ENST00000493075 SLC25A34Q6PIV7 304 aa6.47□□□□□ -1.37
LRTM1-202ENST00000493075 SCGB1D4Q6XE38 83 aa6.47□□□□□ -1.37
LRTM1-202ENST00000493075 Q6ZVH6 145 aa6.47□□□□□ -1.37
LRTM1-202ENST00000493075 ELOF1P60002 83 aaKnown RBP6.46□□□□□ -1.38
LRTM1-202ENST00000493075 TRBV7-6A0A0J9YX20 115 aa6.45□□□□□ -1.38
LRTM1-202ENST00000493075 COX7BP24311 80 aa6.45□□□□□ -1.38
LRTM1-202ENST00000493075 C9orf153Q5TBE3 101 aa6.45□□□□□ -1.38
LRTM1-202ENST00000493075 TRIAP1O43715 76 aa6.44□□□□□ -1.38
LRTM1-202ENST00000493075 SNRPEP62304 92 aaKnown RBP6.44□□□□□ -1.38
LRTM1-202ENST00000493075 C6orf99Q4VX62 202 aa6.44□□□□□ -1.38
LRTM1-202ENST00000493075 KRTAP4-12Q9BQ66 201 aa6.44□□□□□ -1.38
LRTM1-202ENST00000493075 LAMTOR3Q9UHA4 124 aa6.43□□□□□ -1.38
LRTM1-202ENST00000493075 ASB16-AS1Q495Z4 193 aa6.42□□□□□ -1.38
LRTM1-202ENST00000493075 ATOH7Q8N100 152 aa6.42□□□□□ -1.38
LRTM1-202ENST00000493075 PCP2Q8IVA1 136 aa6.41□□□□□ -1.38
LRTM1-202ENST00000493075 MUSTN1Q8IVN3 82 aa6.41□□□□□ -1.38
LRTM1-202ENST00000493075 TEX49A0A1B0GTD5 131 aa6.4□□□□□ -1.39
LRTM1-202ENST00000493075 A0A1B0GWB2 263 aa6.4□□□□□ -1.39
LRTM1-202ENST00000493075 TAL2Q16559 108 aa6.4□□□□□ -1.39
LRTM1-202ENST00000493075 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
LRTM1-202ENST00000493075 A6NDN8 102 aa6.39□□□□□ -1.39
LRTM1-202ENST00000493075 SEC61BP60468 96 aaKnown RBP6.39□□□□□ -1.39
LRTM1-202ENST00000493075 CD164Q04900 197 aa6.39□□□□□ -1.39
LRTM1-202ENST00000493075 LIMD2Q9BT23 127 aa6.39□□□□□ -1.39
LRTM1-202ENST00000493075 TRAV13-2A0A0B4J235 113 aa6.38□□□□□ -1.39
LRTM1-202ENST00000493075 HIST3H2BBQ8N257 126 aa6.38□□□□□ -1.39
LRTM1-202ENST00000493075 IGLV5-48A0A075B6I7 105 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms