RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 TMEM223A0PJW6 202 aa4.03□□□□□ -1.76
SPTA1-208ENST00000492934 SPRR1AP35321 89 aa4.03□□□□□ -1.76
SPTA1-208ENST00000492934 S100A12P80511 92 aa4.03□□□□□ -1.76
SPTA1-208ENST00000492934 RHEBQ15382 184 aa4.03□□□□□ -1.76
SPTA1-208ENST00000492934 LINC00483Q53H64 154 aa4.03□□□□□ -1.76
SPTA1-208ENST00000492934 KRTAP4-1Q9BYQ7 146 aa4.03□□□□□ -1.76
SPTA1-208ENST00000492934 KCNQ1DNQ9H478 68 aa4.03□□□□□ -1.76
SPTA1-208ENST00000492934 RPS10P5Q9NQ39 176 aa4.03□□□□□ -1.76
SPTA1-208ENST00000492934 TRAPPC1Q9Y5R8 145 aa4.03□□□□□ -1.76
SPTA1-208ENST00000492934 KRTAP4-16G5E9R7 235 aaPredicted RBP4.02□□□□□ -1.77
SPTA1-208ENST00000492934 Q8N377 158 aa4.02□□□□□ -1.77
SPTA1-208ENST00000492934 TRAV12-1A0A0B4J245 112 aa4.01□□□□□ -1.77
SPTA1-208ENST00000492934 KRTAP5-9P26371 169 aa4.01□□□□□ -1.77
SPTA1-208ENST00000492934 RPS29P62273 56 aaKnown RBP4.01□□□□□ -1.77
SPTA1-208ENST00000492934 HERV-K104P63124 156 aa4.01□□□□□ -1.77
SPTA1-208ENST00000492934 C9orf153Q5TBE3 101 aa4.01□□□□□ -1.77
SPTA1-208ENST00000492934 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
SPTA1-208ENST00000492934 COMMD7Q86VX2 200 aa4.01□□□□□ -1.77
SPTA1-208ENST00000492934 SLC25A20O43772 301 aa4□□□□□ -1.77
SPTA1-208ENST00000492934 ERC2-IT1O76042 136 aa4□□□□□ -1.77
SPTA1-208ENST00000492934 DDTP30046 118 aa4□□□□□ -1.77
SPTA1-208ENST00000492934 Q6ZRX8 168 aa4□□□□□ -1.77
SPTA1-208ENST00000492934 IFI27L1Q96BM0 104 aa4□□□□□ -1.77
SPTA1-208ENST00000492934 Q9BRP9 147 aa4□□□□□ -1.77
SPTA1-208ENST00000492934 MAP1LC3CQ9BXW4 147 aa4□□□□□ -1.77
SPTA1-208ENST00000492934 MYMXA0A1B0GTQ4 84 aa3.99□□□□□ -1.77
SPTA1-208ENST00000492934 LINC00587B1AMM8 73 aa3.99□□□□□ -1.77
SPTA1-208ENST00000492934 H0Y8G0 127 aa3.99□□□□□ -1.77
SPTA1-208ENST00000492934 MIEN1Q9BRT3 115 aa3.99□□□□□ -1.77
SPTA1-208ENST00000492934 TSPEAR-AS2P59090 65 aa3.98□□□□□ -1.77
SPTA1-208ENST00000492934 C10orf91Q5T1B1 145 aa3.98□□□□□ -1.77
SPTA1-208ENST00000492934 SSBP3-AS1Q7Z2R9 100 aa3.98□□□□□ -1.77
SPTA1-208ENST00000492934 CHCHD1Q96BP2 118 aaKnown RBP3.98□□□□□ -1.77
SPTA1-208ENST00000492934 SPANXB1Q9NS25 103 aaPredicted RBP3.98□□□□□ -1.77
SPTA1-208ENST00000492934 CRCT1Q9UGL9 99 aa3.98□□□□□ -1.77
SPTA1-208ENST00000492934 TRAV23DV6A0A075B6W5 121 aa3.97□□□□□ -1.77
SPTA1-208ENST00000492934 TRBV10-2A0A0K0K1G8 114 aa3.97□□□□□ -1.77
SPTA1-208ENST00000492934 IFITM2Q01629 132 aa3.97□□□□□ -1.77
SPTA1-208ENST00000492934 S100A7L2Q5SY68 101 aa3.97□□□□□ -1.77
SPTA1-208ENST00000492934 HSBP1O75506 76 aa3.96□□□□□ -1.78
SPTA1-208ENST00000492934 JOSD1Q15040 202 aaPredicted RBP3.96□□□□□ -1.78
SPTA1-208ENST00000492934 KRTAP4-4Q9BYR3 166 aa3.96□□□□□ -1.78
SPTA1-208ENST00000492934 LEPROTO15243 131 aa3.95□□□□□ -1.78
SPTA1-208ENST00000492934 IGLV6-57P01721 117 aa3.95□□□□□ -1.78
SPTA1-208ENST00000492934 APOC3P02656 99 aa3.95□□□□□ -1.78
SPTA1-208ENST00000492934 NPC2P61916 151 aa3.95□□□□□ -1.78
SPTA1-208ENST00000492934 ST20-AS1Q8NBB2 130 aa3.95□□□□□ -1.78
SPTA1-208ENST00000492934 LIMD2Q9BT23 127 aa3.95□□□□□ -1.78
SPTA1-208ENST00000492934 FSIP2Q5CZC0 6907 aa3.95□□□□□ -1.78
SPTA1-208ENST00000492934 LOC107984156A0A0G2JMH3 177 aa3.94□□□□□ -1.78
SPTA1-208ENST00000492934 C9orf92A6NGG3 77 aa3.94□□□□□ -1.78
SPTA1-208ENST00000492934 J3QQQ9 107 aa3.94□□□□□ -1.78
SPTA1-208ENST00000492934 ZNF73O43830 326 aaPredicted RBP3.94□□□□□ -1.78
SPTA1-208ENST00000492934 SNAPINO95295 136 aa3.94□□□□□ -1.78
SPTA1-208ENST00000492934 LGALS3P17931 250 aaKnown RBP3.94□□□□□ -1.78
SPTA1-208ENST00000492934 MT3P25713 68 aa3.94□□□□□ -1.78
SPTA1-208ENST00000492934 PLNP26678 52 aa3.94□□□□□ -1.78
SPTA1-208ENST00000492934 HERVK_113P61574 105 aa3.94□□□□□ -1.78
SPTA1-208ENST00000492934 NDUFA5Q16718 116 aa3.94□□□□□ -1.78
SPTA1-208ENST00000492934 PCOTHQ58A44 107 aa3.94□□□□□ -1.78
SPTA1-208ENST00000492934 ARL17AQ8IVW1 177 aa3.94□□□□□ -1.78
SPTA1-208ENST00000492934 IGLV8-61A0A075B6I0 122 aa3.93□□□□□ -1.78
SPTA1-208ENST00000492934 LEPROTL1O95214 131 aa3.93□□□□□ -1.78
SPTA1-208ENST00000492934 NDUFC2O95298 119 aa3.93□□□□□ -1.78
SPTA1-208ENST00000492934 CFC1BP0CG36 223 aa3.93□□□□□ -1.78
SPTA1-208ENST00000492934 NMUP48645 174 aa3.93□□□□□ -1.78
SPTA1-208ENST00000492934 MT1HP80294 61 aa3.93□□□□□ -1.78
SPTA1-208ENST00000492934 KRTAP19-2Q3LHN2 52 aa3.93□□□□□ -1.78
SPTA1-208ENST00000492934 HRCT1Q6UXD1 115 aa3.93□□□□□ -1.78
SPTA1-208ENST00000492934 SVBPQ8N300 66 aa3.93□□□□□ -1.78
SPTA1-208ENST00000492934 DPM2O94777 84 aa3.92□□□□□ -1.78
SPTA1-208ENST00000492934 PCP4P48539 62 aa3.92□□□□□ -1.78
SPTA1-208ENST00000492934 SOSTDC1Q6X4U4 206 aa3.92□□□□□ -1.78
SPTA1-208ENST00000492934 PMCHL2Q9BQD1 86 aa3.92□□□□□ -1.78
SPTA1-208ENST00000492934 SERF1AO75920 110 aa3.91□□□□□ -1.78
SPTA1-208ENST00000492934 HINT1P49773 126 aaPredicted RBP3.91□□□□□ -1.78
SPTA1-208ENST00000492934 SLC25A34Q6PIV7 304 aa3.91□□□□□ -1.78
SPTA1-208ENST00000492934 YPEL4Q96NS1 127 aa3.91□□□□□ -1.78
SPTA1-208ENST00000492934 CBY1Q9Y3M2 126 aa3.91□□□□□ -1.78
SPTA1-208ENST00000492934 A0A0J9YXY3 114 aa3.9□□□□□ -1.79
SPTA1-208ENST00000492934 C5orf52A6NGY3 159 aa3.9□□□□□ -1.79
SPTA1-208ENST00000492934 IGKCP01834 107 aa3.9□□□□□ -1.79
SPTA1-208ENST00000492934 OR13C6PQ8NH95 151 aa3.9□□□□□ -1.79
SPTA1-208ENST00000492934 HSPB8Q9UJY1 196 aa3.9□□□□□ -1.79
SPTA1-208ENST00000492934 FABP4P15090 132 aa3.89□□□□□ -1.79
SPTA1-208ENST00000492934 SPRR1BP22528 89 aa3.89□□□□□ -1.79
SPTA1-208ENST00000492934 Q1RN00 199 aa3.89□□□□□ -1.79
SPTA1-208ENST00000492934 ADAMTSL4-AS1Q5T5F5 129 aa3.89□□□□□ -1.79
SPTA1-208ENST00000492934 SPANXCQ9NY87 97 aa3.89□□□□□ -1.79
SPTA1-208ENST00000492934 DHRS4-AS1Q9P1J3 65 aa3.89□□□□□ -1.79
SPTA1-208ENST00000492934 LAMTOR3Q9UHA4 124 aa3.89□□□□□ -1.79
SPTA1-208ENST00000492934 H7C2G1 150 aa3.88□□□□□ -1.79
SPTA1-208ENST00000492934 M0R2T5 61 aa3.88□□□□□ -1.79
SPTA1-208ENST00000492934 TRGC2P03986 189 aa3.88□□□□□ -1.79
SPTA1-208ENST00000492934 COX6B2Q6YFQ2 88 aa3.88□□□□□ -1.79
SPTA1-208ENST00000492934 E9PLD3 99 aa3.87□□□□□ -1.79
SPTA1-208ENST00000492934 COX7BP24311 80 aa3.87□□□□□ -1.79
SPTA1-208ENST00000492934 ELOF1P60002 83 aaKnown RBP3.87□□□□□ -1.79
SPTA1-208ENST00000492934 LINC00308Q8TCZ7 52 aa3.87□□□□□ -1.79
SPTA1-208ENST00000492934 SPANXDQ9BXN6 97 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms