RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 KRTAP10-4P60372 401 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-213ENST00000492506 LINC01561Q8N1V8 128 aa8.7□□□□□ -1.02
HDAC3-213ENST00000492506 PSCAO43653 123 aa8.69□□□□□ -1.02
HDAC3-213ENST00000492506 GYPEP15421 78 aa8.69□□□□□ -1.02
HDAC3-213ENST00000492506 C1orf195Q5TG92 126 aa8.69□□□□□ -1.02
HDAC3-213ENST00000492506 FAM19A3Q7Z5A8 133 aa8.69□□□□□ -1.02
HDAC3-213ENST00000492506 IGHV1OR15-1A0A075B7D0 117 aa8.68□□□□□ -1.02
HDAC3-213ENST00000492506 TRGV4A0A0C4DH28 118 aa8.68□□□□□ -1.02
HDAC3-213ENST00000492506 IGLV5-39A0A0G2JS06 123 aa8.68□□□□□ -1.02
HDAC3-213ENST00000492506 IBA57-AS1B1ANH7 110 aa8.68□□□□□ -1.02
HDAC3-213ENST00000492506 GNRH2O43555 120 aa8.68□□□□□ -1.02
HDAC3-213ENST00000492506 XCL1P47992 114 aa8.68□□□□□ -1.02
HDAC3-213ENST00000492506 KLKP1Q107X0 134 aa8.68□□□□□ -1.02
HDAC3-213ENST00000492506 CYSTM1Q9H1C7 97 aa8.68□□□□□ -1.02
HDAC3-213ENST00000492506 C22orf24Q9Y442 160 aa8.68□□□□□ -1.02
HDAC3-213ENST00000492506 IGKV3D-7A0A0C4DH55 119 aa8.67□□□□□ -1.02
HDAC3-213ENST00000492506 CCKP06307 115 aa8.67□□□□□ -1.02
HDAC3-213ENST00000492506 PLA2G2DQ9UNK4 145 aa8.67□□□□□ -1.02
HDAC3-213ENST00000492506 IGHV3-16A0A0C4DH30 117 aa8.66□□□□□ -1.02
HDAC3-213ENST00000492506 IGHV3-38A0A0C4DH36 116 aa8.66□□□□□ -1.02
HDAC3-213ENST00000492506 LINC01556Q5JQF7 62 aa8.66□□□□□ -1.02
HDAC3-213ENST00000492506 LINC00846Q9NV44 126 aa8.66□□□□□ -1.02
HDAC3-213ENST00000492506 A0A087WWL8 130 aa8.65□□□□□ -1.02
HDAC3-213ENST00000492506 LOC100131303A0A0U1RQF7 123 aa8.65□□□□□ -1.02
HDAC3-213ENST00000492506 OPRPNQ99935 248 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-213ENST00000492506 UBL5Q9BZL1 73 aa8.64□□□□□ -1.03
HDAC3-213ENST00000492506 Q9HAA7 133 aa8.64□□□□□ -1.03
HDAC3-213ENST00000492506 H3BQ85 93 aa8.63□□□□□ -1.03
HDAC3-213ENST00000492506 H7BZZ5 65 aa8.63□□□□□ -1.03
HDAC3-213ENST00000492506 SCXQ7RTU7 201 aa8.63□□□□□ -1.03
HDAC3-213ENST00000492506 RNF213Q63HN8 5207 aa8.63□□□□□ -1.03
HDAC3-213ENST00000492506 C20orf197Q8N268 126 aa8.62□□□□□ -1.03
HDAC3-213ENST00000492506 ORMDL1Q9P0S3 153 aa8.62□□□□□ -1.03
HDAC3-213ENST00000492506 FAM74A4Q5TZK3 123 aa8.61□□□□□ -1.03
HDAC3-213ENST00000492506 C14orf132Q9NPU4 83 aa8.61□□□□□ -1.03
HDAC3-213ENST00000492506 ERC2-IT1O76042 136 aa8.6□□□□□ -1.03
HDAC3-213ENST00000492506 LINC00167Q96N53 147 aa8.6□□□□□ -1.03
HDAC3-213ENST00000492506 ZNF625Q96I27 306 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-213ENST00000492506 FAM218AQ96MZ4 157 aa8.59□□□□□ -1.03
HDAC3-213ENST00000492506 A0A087WVE0 104 aa8.58□□□□□ -1.04
HDAC3-213ENST00000492506 LECT2O14960 151 aa8.58□□□□□ -1.04
HDAC3-213ENST00000492506 LRP2P98164 4655 aa8.58□□□□□ -1.04
HDAC3-213ENST00000492506 FAM104AQ969W3 186 aa8.58□□□□□ -1.04
HDAC3-213ENST00000492506 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-213ENST00000492506 TMEM256-PLSCR3K7ERE1 68 aa8.57□□□□□ -1.04
HDAC3-213ENST00000492506 PDE6GP18545 87 aa8.57□□□□□ -1.04
HDAC3-213ENST00000492506 DGAT2L7PQ6IED9 249 aa8.57□□□□□ -1.04
HDAC3-213ENST00000492506 Q8N3U1 123 aa8.57□□□□□ -1.04
HDAC3-213ENST00000492506 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
HDAC3-213ENST00000492506 CDKN2A-AS1Q9UH64 79 aa8.57□□□□□ -1.04
HDAC3-213ENST00000492506 PKIGQ9Y2B9 76 aa8.57□□□□□ -1.04
HDAC3-213ENST00000492506 TNXBP22105 4242 aa8.56□□□□□ -1.04
HDAC3-213ENST00000492506 C6orf226Q5I0X4 101 aa8.56□□□□□ -1.04
HDAC3-213ENST00000492506 LELP1Q5T871 98 aa8.56□□□□□ -1.04
HDAC3-213ENST00000492506 SOSTDC1Q6X4U4 206 aa8.56□□□□□ -1.04
HDAC3-213ENST00000492506 CIRBP-AS1Q8TBR5 109 aa8.56□□□□□ -1.04
HDAC3-213ENST00000492506 TRBV7-6A0A0J9YX20 115 aa8.54□□□□□ -1.04
HDAC3-213ENST00000492506 SMIM1B2RUZ4 78 aa8.54□□□□□ -1.04
HDAC3-213ENST00000492506 RBM3P98179 157 aaKnown RBP8.54□□□□□ -1.04
HDAC3-213ENST00000492506 TRAV23DV6A0A075B6W5 121 aa8.53□□□□□ -1.04
HDAC3-213ENST00000492506 MT1HL1P0DM35 61 aa8.53□□□□□ -1.04
HDAC3-213ENST00000492506 CXCL6P80162 114 aa8.53□□□□□ -1.04
HDAC3-213ENST00000492506 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-213ENST00000492506 SND1-IT1Q9HBX3 110 aa8.53□□□□□ -1.04
HDAC3-213ENST00000492506 TRBV6-4A0A1B0GX49 114 aa8.52□□□□□ -1.05
HDAC3-213ENST00000492506 SMIM11BQ8TCY0 68 aa8.52□□□□□ -1.05
HDAC3-213ENST00000492506 BRK1Q8WUW1 75 aa8.52□□□□□ -1.05
HDAC3-213ENST00000492506 A0A087WYN8 130 aa8.51□□□□□ -1.05
HDAC3-213ENST00000492506 LOC110117498A0A087WWA1 95 aa8.5□□□□□ -1.05
HDAC3-213ENST00000492506 LINC00242Q5T6M2 205 aa8.5□□□□□ -1.05
HDAC3-213ENST00000492506 ENHOQ6UWT2 76 aa8.5□□□□□ -1.05
HDAC3-213ENST00000492506 PRR15Q8IV56 129 aa8.5□□□□□ -1.05
HDAC3-213ENST00000492506 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
HDAC3-213ENST00000492506 IGHV3-73A0A0B4J1V6 119 aa8.49□□□□□ -1.05
HDAC3-213ENST00000492506 F8WEM9 126 aa8.49□□□□□ -1.05
HDAC3-213ENST00000492506 NCR3O14931 201 aa8.48□□□□□ -1.05
HDAC3-213ENST00000492506 LINC00337Q8N6G1 96 aa8.48□□□□□ -1.05
HDAC3-213ENST00000492506 IGKV2-29A2NJV5 120 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-213ENST00000492506 RPL37AP61513 92 aaKnown RBP8.47□□□□□ -1.05
HDAC3-213ENST00000492506 RPL36AP83881 106 aaKnown RBP8.47□□□□□ -1.05
HDAC3-213ENST00000492506 RPL36ALQ969Q0 106 aaKnown RBP8.47□□□□□ -1.05
HDAC3-213ENST00000492506 Q9UF83 564 aa8.47□□□□□ -1.05
HDAC3-213ENST00000492506 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-213ENST00000492506 FAM19A1Q7Z5A9 133 aa8.46□□□□□ -1.06
HDAC3-213ENST00000492506 COX7B2Q8TF08 81 aa8.46□□□□□ -1.06
HDAC3-213ENST00000492506 IGKV2-28A0A075B6P5 120 aa8.45□□□□□ -1.06
HDAC3-213ENST00000492506 TRBV10-1A0A0K0K1A3 114 aa8.45□□□□□ -1.06
HDAC3-213ENST00000492506 IGKV2D-28P01615 120 aa8.45□□□□□ -1.06
HDAC3-213ENST00000492506 PMAIP1Q13794 54 aa8.45□□□□□ -1.06
HDAC3-213ENST00000492506 Q6ZRU5 148 aa8.45□□□□□ -1.06
HDAC3-213ENST00000492506 IGKV2D-24A0A075B6R9 120 aa8.44□□□□□ -1.06
HDAC3-213ENST00000492506 RNASE13Q5GAN3 156 aaKnown RBP8.44□□□□□ -1.06
HDAC3-213ENST00000492506 ZNF561-AS1K7EIQ3 104 aa8.43□□□□□ -1.06
HDAC3-213ENST00000492506 CD164Q04900 197 aa8.43□□□□□ -1.06
HDAC3-213ENST00000492506 SS18Q15532 418 aa8.43□□□□□ -1.06
HDAC3-213ENST00000492506 RMI2Q96E14 147 aa8.43□□□□□ -1.06
HDAC3-213ENST00000492506 TRBV7-4A0A0J9YYF1 115 aa8.42□□□□□ -1.06
HDAC3-213ENST00000492506 COX6A2Q02221 97 aa8.42□□□□□ -1.06
HDAC3-213ENST00000492506 KLK12Q9UKR0 248 aa8.42□□□□□ -1.06
HDAC3-213ENST00000492506 LINC00158P58513 81 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms